Dr Krista Sumby

Postdoctoral Research Fellow (B) (with Phd)

School of Agriculture, Food and Wine

Faculty of Sciences, Engineering and Technology

Eligible to supervise Masters and PhD - email supervisor to discuss availability.


Dr Krista Sumby is a Postdoctoral Research Fellow in the School of Agriculture, Food and Wine. She is currently part of a project looking at “Past, Present and Future Drivers of Soil Change” utilising her expertise in microbial ecology and molecular biology. Dr Sumby is working to identify microorganisms in Australian soil samples (the soil microbiome) collected regularly over the past two decades to see if changes in farming systems have led to changes in soil microbial communities. The results will likely lead to recommendations for farming practices to encourage the most beneficial microbial communities. The potential benefits of farming with a greater reliance on the soil biota (rather than external inputs) include healthy soil for crop plants to thrive and in return produce more consistent food and a reduced carbon footprint.Dr Sumby has over fifteen years of scientific research experience and has worked on several molecular and microbiology-based projects. She completed an MSc in Microbiology at the University of Canterbury leading to work in the dairy industry on microbial genetic projects. Dr Sumby completed a PhD in Wine Microbiology in 2013, working on bacterial enzymes involved in flavour production in wine, before further work in wine microbiology and microbial ecology isolating and identifying yeast and bacteria from the environment. Dr Sumby was most recently a Postdoctoral Researcher with the Australian Research Council Training Centre for Innovative Wine Production at The University of Adelaide (2017-2022) investigating vine and grape attributes that favour particular yeast species.

Current project: 

Past, Present and Future Drivers of Soil Change. Have changes in farming systems led to changes in soil microbial communities?

Picture of sea, pasture and a rainbowGraph showing relative abundance of different bacteria in samples testedKrona_taxa_plot

Past projects:

  • Exploiting the secondary metabolism of lactic acid bacteria to improve wine aroma
  • Defining and exploiting the indigenous microflora of grapes
  • Directed evolution of more robust non-Saccharomyces yeast strains for completion of alcoholic fermentation
  • Directed evolution of superior LAB for quicker and more reliable malolactic fermentation
  • Heterologous expression and characterisation of esterase's from lactic acid bacteria to investigate their potential for use in winemaking

yeast and bacteria picture

Projects involving supervision of HDR students include:

  • Isolation and characterisation of improved lactic acid bacteria strains for optimised malolactic fermentation performance
  • Bioprospecting for Lactic Acid Bacteria in Novel Australian Niches
  • Defining and Exploiting the Indigenous Microflora of Grapes
  • Isolation and characterisation of yeast with novel biotechnological properties for use in winemaking
  • Identification and understanding of Saccharomyces and Oenococcus oeni interactions, in co-inoculated fermentations, for development of robust inoculation pairs in wine production
  • The influence of sulfur compounds on yeast, bacteria and mixed cultures of these in oenology

 

Date Position Institution name
2022 - ongoing Postdoctoral Research Fellow, Soil Ecology The University of Adelaide
2018 - 2022 Postdoctoral Research Fellow, ARC Training Centre for Innovative Wine Production University of Adelaide
2014 - 2018 Postdoctoral Research Fellow University of Adelaide
2013 - 2013 Casual Technician, Wine Microbiology and Microbial Biotechnology Laboratory University of Adelaide
2007 - 2013 Practical demonstrator, Microbiology and Invertebrate Biology II University of Adelaide
2007 - 2013 Practical demonstrator, Microbiology for Viticulture and Oenology II University of Adelaide
2001 - 2003 Technical Officer Fonterra Research Centre
2001 - 2001 Casual Technician Environmental Science and Research Ltd
2000 - 2001 Practical demonstrator, Biotechnology III University of Canterbury
2000 - 2001 Practical demonstrator, Microbiology II University of Canterbury
2000 - 2001 Practical demonstrator, Microbiology III University of Canterbury

Date Type Title Institution Name Country Amount
2016 Award Best Poster in Oenology-Microbiology 16th AWITC Australia -
2014 Recognition Postgraduate Alumni University Medal University of Adelaide - -
2013 Award The Harold Woolhouse Prize for The Best PhD Thesis in The Faculty of Sciences University of Adelaide - -
2013 Recognition Dean's Commendation for Doctoral Thesis Excellence University of Adelaide - -

Date Institution name Country Title
2007 - 2013 University of Adelaide Australia PhD
1999 - 2001 University of Canterbury New Zealand MSc (1st Hons Microbiology)
1996 - 1998 University of Canterbury New Zealand BSc

Date Title Institution name Country
2016 Provide First Aid Course St John Ambulance Australia -

Year Citation
2024 Sumby, K. M., Stephen, J. R., Austin, J. J., Schilling, R. K., & Cavagnaro, T. R. (2024). A novel method to assess the integrity of frozen archival DNA samples: Alpha-diversity ratios of short- and long-read 16S rRNA gene sequences. Methods in Ecology and Evolution, 15(10), 1804-1813.
DOI
2023 Oliphant, S. A., Watson-Haigh, N. S., Sumby, K. M., Gardner, J. M., & Jiranek, V. (2023). Fructilactobacillus cliffordii sp. nov., Fructilactobacillus hinvesii sp. nov., Fructilactobacillus myrtifloralis sp. nov., Fructilactobacillus carniphilus sp. nov. and Fructobacillus americanaquae sp. nov., five novel lactic acid bacteria isolated from insects or flowers of Kangaroo Island, South Australia. International Journal of Systematic and Evolutionary Microbiology, 73(2), 005730-1-005730-14.
DOI Scopus4 WoS5 Europe PMC3
2023 Lin, M. M. H., Walker, M. E., Jiranek, V., & Sumby, K. M. (2023). Genomic analysis of Kazachstania aerobia and Kazachstania servazzii reveals duplication of genes related to acetate ester production. Microbial Genomics, 9(6), 1-14.
DOI Scopus5 WoS4 Europe PMC2
2022 Oliphant, S. A., Watson-Haigh, N. S., Sumby, K. M., Gardner, J., Groom, S., & Jiranek, V. (2022). Apilactobacillus apisilvae sp. nov., Nicolia spurrieriana gen. nov. sp. nov., Bombilactobacillus folatiphilus sp. nov. and Bombilactobacillus thymidiniphilus sp. nov., four new lactic acid bacterial isolates from stingless bees Tetragonula carbonaria and Austroplebeia australis. International Journal of Systematic and Evolutionary Microbiology, 72(9), 1-15.
DOI Scopus17 WoS14 Europe PMC15
2021 Sumby, K. M., Caliani, N. S., & Jiranek, V. (2021). Yeast diversity in the vineyard: how it is defined, measured and influenced by fungicides. Australian Journal of Grape and Wine Research, 27(2), 169-193.
DOI Scopus9 WoS12
2021 Virdis, C., Sumby, K., Bartowsky, E., & Jiranek, V. (2021). Lactic acid bacteria in wine: technological advances and evaluation of their functional role. Frontiers in Microbiology, 11, 1-16.
DOI Scopus142 WoS131 Europe PMC63
2021 Bartle, L., Peltier, E., Sundstrom, J., Sumby, K., Mitchell, J., Jiranek, V., & Marullo, P. (2021). QTL mapping: an innovative method for investigating the genetic determinism of yeast-bacteria interactions in wine.
DOI
2021 Walker, M. E., Zhang, J., Sumby, K. M., Lee, A., Houlès, A., Li, S., & Jiranek, V. (2021). Sulfate transport mutants affect hydrogen sulfide and sulfite production during alcoholic fermentation. Yeast, 38(6), 367-381.
DOI Scopus12 WoS9 Europe PMC4
2021 Bartle, L., Peltier, E., Sundstrom, J. F., Sumby, K., Mitchell, J. G., Jiranek, V., & Marullo, P. (2021). QTL mapping: an innovative method for investigating the genetic determinism of yeast-bacteria interactions in wine. Applied Microbiology and Biotechnology, 105(12), 5053-5066.
DOI Scopus6 WoS5 Europe PMC1
2021 Xu, Z., Walker, M. E., Zhang, J., Gardner, J. M., Sumby, K. M., & Jiranek, V. (2021). Exploring the diversity of bacteriophage specific to Oenococcus oeni and Lactobacillus spp and their role in wine production. Applied Microbiology and Biotechnology, 105(23), 8575-8592.
DOI Scopus7 WoS5 Europe PMC6
2021 Lin, M. M. -H., Boss, P. K., Walker, M. E., Sumby, K. M., & Jiranek, V. (2021). Influence of Kazachstania spp. on the chemical and sensory profile of red wines. International Journal of Food Microbiology, 362(2), 109496-1-109496-11.
DOI Scopus29 WoS26 Europe PMC12
2020 Alperstein, L., Gardner, J. M., Sundstrom, J. F., Sumby, K. M., & Jiranek, V. (2020). Yeast bioprospecting versus synthetic biology–which is better for innovative beverage fermentation?. Applied Microbiology and Biotechnology, 104(5), 1939-1953.
DOI Scopus30 WoS26 Europe PMC12
2019 Sumby, K. M., Niimi, J., Betteridge, A. L., & Jiranek, V. (2019). Ethanol-tolerant lactic acid bacteria strains as a basis for efficient malolactic fermentation in wine: evaluation of experimentally evolved lactic acid bacteria and winery isolates. Australian Journal of Grape and Wine Research, 25(4), 404-413.
DOI Scopus14 WoS14
2019 Lin, M. M. -H., Boss, P. K., Walker, M. E., Sumby, K. M., Grbin, P. R., & Jiranek, V. (2019). Evaluation of indigenous non-Saccharomyces yeasts isolated from a South Australian vineyard for their potential as wine starter cultures. International Journal of Food Microbiology, 312, 108373.
DOI Scopus67 WoS57 Europe PMC25
2019 Sumby, K. M., Bartle, L., Grbin, P. R., & Jiranek, V. (2019). Measures to improve wine malolactic fermentation. Applied Microbiology and Biotechnology, 103(5), 2033-2051.
DOI Scopus102 WoS88 Europe PMC47
2019 Bartle, L., Sumby, K., Sundstrom, J., & Jiranek, V. (2019). The microbial challenge of winemaking: yeast-bacteria compatibility. FEMS Yeast Research, 19(4), foz040-1-foz040-16.
DOI Scopus64 WoS53 Europe PMC28
2018 Betteridge, A., Sumby, K., Sundstrom, J., Grbin, P., & Jiranek, V. (2018). Application of directed evolution to develop ethanol tolerant Oenococcus oeni for more efficient malolactic fermentation. Applied Microbiology and Biotechnology, 102(2), 921-932.
DOI Scopus32 WoS27 Europe PMC15
2018 Jiang, J., Sumby, K., Sundstrom, J., Grbin, P., & Jiranek, V. (2018). Directed evolution of Oenococcus oeni strains for more efficient malolactic fermentation in a multi-stressor wine environment. Food Microbiology, 73, 150-159.
DOI Scopus29 WoS25 Europe PMC12
2014 Sumby, K., Grbin, P., & Jiranek, V. (2014). Implications of new research and technologies for malolactic fermentation in wine. Applied Microbiology and Biotechnology, 98(19), 8111-8132.
DOI Scopus91 WoS81 Europe PMC43
2013 Sumby, K., Jiranek, V., & Grbin, P. (2013). Ester synthesis and hydrolysis in an aqueous environment, and strain specific changes during malolactic fermentation in wine with Oenococcus oeni. Food Chemistry, 141(3), 1673-1680.
DOI Scopus51 WoS42 Europe PMC23
2013 Sumby, K., Grbin, P., & Jiranek, V. (2013). Characterization of EstCOo8 and EstC34, intracellular esterases, from the wine-associated lactic acid bacteria Oenococcus oeni and Lactobacillus hilgardii. Journal of Applied Microbiology, 114(2), 413-422.
DOI Scopus28 WoS24 Europe PMC19
2012 Sumby, K., Grbin, P., & Jiranek, V. (2012). Validation of the use of multiple internal control genes, and the application of real-time quantitative PCR, to study esterase gene expression in Oenococcus oeni. Applied Microbiology and Biotechnology, 96(4), 1039-1047.
DOI Scopus28 WoS23 Europe PMC22
2010 Donkin, R., Robinson, S., Sumby, K., Harris, V., McBryde, C., & Jiranek, V. (2010). Sodium chloride in Australian grape juice and its effect on alcoholic and malolactic fermentation. American Journal of Enology and Viticulture, 61(3), 392-400.
DOI Scopus13 WoS12
2010 Sumby, K., Grbin, P., & Jiranek, V. (2010). Microbial modulation of aromatic esters in wine: Current knowledge and future prospects. Food Chemistry, 121(1), 1-16.
DOI Scopus514 WoS446 Europe PMC188
2009 Sumby, K., Matthews, A., Grbin, P., & Jiranek, V. (2009). Cloning and characterization of an intracellular esterase from the wine-associated lactic acid bacterium Oenococcus oeni. Applied and Environmental Microbiology, 75(21), 6729-6735.
DOI Scopus52 WoS51 Europe PMC37
2004 Klena, J. D., Parker, C. T., Knibb, K., Claire Ibbitt, J., Devane, P. M. L., Horn, S. T., . . . Konkel, M. E. (2004). Differentiation of Campylobacter coli, Campylobacter jejuni, Campylobacter lari, and Campylobacter upsaliensis by a multiplex PCR developed from the nucleotide sequence of the lipid A gene lpxA. Journal of Clinical Microbiology, 42(12), 5549-5557.
DOI Scopus172 WoS163 Europe PMC128
2004 Klena, J. D., Parker, C. T., Knibb, K., Claire Ibbitt, J., Devane, P. M. L., Horn, S. T., . . . Konkel, M. E. (2004). Differentiation of Campylobacter coli, Campylobacter jejuni, Campylobacter lari, and Campylobacter upsaliensis by a multiplex PCR developed from the nucleotide sequence of the lipid A gene lpxA. Journal of Clinical Microbiology, 42(12), 5549-5557.
DOI Scopus172 WoS163 Europe PMC128

Year Citation
2024 Shi, A., Cavagnaro, T. R., Sumby, K. M., McDonald, G., Denton, M. D., Roy, S. J., & Schilling, R. K. (2024). Impact of agronomic management on the soil microbiome: A southern Australian dryland broadacre perspective. In D. Sparks (Ed.), Advances in Agronomy (Vol. 186, pp. 113-171). Elsevier.
DOI Scopus3

Year Citation
2022 Sumby, K., Bartowsky, E., & Jiranek, V. (2022). "Keep cool and carry on" Improved malolactic fermentation. Poster session presented at the meeting of Abstracts of the 18th Australian Wine Industry Technical Conference (AWITC). Adelaide Convention Centre, Adelaide, SA: AWITC.
2022 Sumby, K., Bartowsky, E., Caliani, N., Collins, C., Borneman, A., Chalmers, K., & Jiranek, V. (2022). Realise the rewards of a diverse fermentation with less risk. Poster session presented at the meeting of Abstracts of the 18th Australian Wine Industry Technical Conference (AWITC, 2022). Glen Osmond, South Australia: The Australian Wine Industry Technical Conference Inc..
2022 Lin, M., Boss, P., Sumby, K., Walker, M., & Jiranek, V. (2022). Kazachstania spp.: A non-Saccharomyces yeast that to enhances fruity and floral aromas in wine. Poster session presented at the meeting of Abstracts of the 18th Australian Wine Industry Technical Conference (AWITC, 2022). Glen Osmond, South Australia: The Australian Wine Industry Technical Conference Inc..
2022 Caliani, N., Sumby, K., Sundstrom, J., Collins, C., Kelsey, L., Bartowsky, E., . . . Jiranek, V. (2022). Broadening your winemaking yeast portfolio: Identification of an SO2 tolerant non-Saccharomyces. Poster session presented at the meeting of Abstracts of the 18th Australian Wine Industry Technical Conference (AWITC, 2022). Glen Osmond, South Australia: The Australian Wine Industry Technical Conference Inc..
2019 Sumby, K. M., & Jiranek, V. (2019). Defining and Exploiting the Indigenous Microflora of Grapes. Poster session presented at the meeting of 17th Australian Wine Industry Technical Conference..
2017 Bartle, L., Sundstrom, J., Sumby, K., Mitchell, J., & Jiranek, V. (2017). Compatibility of industrial Saccharomyces uvarum and Saccharomyces cerevisiae with Oenococcus oeni during synthetic red juice fermentation.. Poster session presented at the meeting of International Conference on Yeast Genetics and Molecular Biology (ICYGMB). Prague.
2017 Bartle, L., Sundstrom, J., Sumby, K., Mitchell, J., & Jiranek, V. (2017). Compatibility of industrial Saccharomyces uvarum and Saccharomyces cerevisiae with Oenococcus oeni during synthetic red juice fermentation.. Poster session presented at the meeting of International Conference on Yeast Genetics and Molecular Biology (ICYGMB). Prague.
2017 Jiang, J., Sumby, K. M., Sundstrom, J., Grbin, P., & Jiranek, V. (2017). Directed evolution of Oenococcus oeni for enhanced malolactic fermentation.. Poster session presented at the meeting of 12th International Symposium on Lactic Acid Bacteria. Egmond aan Zee, The Netherlands.
2017 Jiang, J., Sumby, K. M., Sundstrom, J., Grbin, P., & Jiranek, V. (2017). Directed evolution of Oenococcus oeni for enhanced malolactic fermentation.. Poster session presented at the meeting of 12th International Symposium on Lactic Acid Bacteria. Egmond aan Zee, The Netherlands.
2016 Jiang, J., Betteridge, A., Sumby, K. M., Sundstrom, J., Grbin, P., & Jiranek, V. (2016). Oenococcus oeni: can we improve its malolactic fermentation performance?. Poster session presented at the meeting of 16th Australian Wine Industry Technical Conference. Adelaide.
2016 Jiang, J., Betteridge, A., Sumby, K. M., Sundstrom, J., Grbin, P., & Jiranek, V. (2016). Oenococcus oeni: can we improve its malolactic fermentation performance?. Poster session presented at the meeting of 16th Australian Wine Industry Technical Conference. Adelaide.
2016 Sumby, K. M., Grbin, P. R., & Jiranek, V. (2016). More efficient malolactic fermentation by directed evolution of Lactobacillus plantarum. Poster session presented at the meeting of Poster AWITC. Adelaide.
2016 Sumby, K. M., Grbin, P. R., & Jiranek, V. (2016). More efficient malolactic fermentation by directed evolution of Lactobacillus plantarum.. Poster session presented at the meeting of 16th Australian Wine Industry Technical Conference.
2013 Sundstrom, J. F., Gardner, J., Sumby, K., Oliver, S., & Jiranek, V. (2013). Investigating the effect of quorum signalling molecules on wine yeast strains and their impact on alcoholic fermentation. Poster session presented at the meeting of http://www.ayeastgroup.org/wp-content/uploads/2016/11/YPD2013-proceedings.pdf. Massey University, Albany, Auckland, New Zealand.
2013 Sumby, K. M., Grbin, P. R., & Jiranek, V. (2013). Characterisation of intracellular esterases from Oenococcus oeni and Lactobacillus hillgardii and their potential for application in wine. Poster session presented at the meeting of 15th Australian Wine Industry Technical Conference, information and abstracts. Sydney, N.S.W..

Year Citation
2013 Sumby, K. M. (2013). Molecular and Biochemical Characterisation of Esterases from Oenococcus oeni and Their Potential For Application In Wine.. (PhD Thesis).
2001 Knibb, K. M. (2001). Development of Rapid Detection and Identification Methods for Thermotolerant Campylobacter spp.. (Master's Thesis, University of Canterbury).

Year Citation
- Lin, M., Boss, P., Walker, M., Sumby, K., & Jiranek, V. (n.d.). Influence of Kazachstania spp. on the chemical and sensory profile of red wines.
DOI

Date Role Research Topic Program Degree Type Student Load Student Name
2025 Co-Supervisor Exploring Cold-Adapted Cytochrome P450 Enzymes from Psychrophilic Organisms: Production, Characterization, and Biotechnological Applications. Doctor of Philosophy Doctorate Full Time Miss Rabia Mehmood
2025 Co-Supervisor Exploring Cold-Adapted Cytochrome P450 Enzymes from Psychrophilic Organisms: Production, Characterization, and Biotechnological Applications. Doctor of Philosophy Doctorate Full Time Miss Rabia Mehmood
2020 Co-Supervisor The influence of sulfur compounds on yeast, bacteria and mixed cultures of these in oenology Doctor of Philosophy Doctorate Part Time Emily Hocking
2020 Co-Supervisor The influence of sulfur compounds on yeast, bacteria and mixed cultures of these in oenology Doctor of Philosophy Doctorate Full Time Emily Hocking
2019 Co-Supervisor Bioprospecting for Lactic Acid Bacteria in Novel Australian Niches Doctor of Philosophy Doctorate Part Time Mr Scott Allen Oliphant
2019 Co-Supervisor Bioprospecting for Lactic Acid Bacteria in Novel Australian Niches Doctor of Philosophy Doctorate Full Time Mr Scott Allen Oliphant

Date Role Research Topic Program Degree Type Student Load Student Name
2020 - 2024 Principal Supervisor Defining and Exploiting the Indigenous Microflora of Grapes Doctor of Philosophy Doctorate Full Time Miss Natalia Soledad Caliani
2019 - 2022 Co-Supervisor Isolation and Characterisation of Yeasts with Biotechnological Properties Doctor of Philosophy Doctorate Full Time Miss Mandy Man-Hsi Lin
2016 - 2020 Co-Supervisor Identification and Understanding of Saccharomyces and Oenococcus Interactions in Wine Fermentation Doctor of Philosophy Doctorate Full Time Mrs Louise Joyce Pelle
2013 - 2017 Co-Supervisor Use of Directed Evolution to Generate Multiple-stress Tolerant Oenococcus oeni for Enhanced Malolactic Fermentation Doctor of Philosophy Doctorate Full Time Miss Jiao Jiang

Date Role Research Topic Location Program Supervision Type Student Load Student Name
2019 - 2019 Principal Supervisor Identification and characterisation of yeast from the vineyard The University of Adelaide Applied Biology Student placement Other Part Time Evdoxia Lagonik
2018 - 2018 Principal Supervisor Investigating a more reliable system for genetic manipulation in Oenococcus oeni The University of Adelaide Applied Biology Student placement Other Part Time Thu-Nghy Do
2016 - 2017 Co-Supervisor Developing new starter cultures of lactic acid bacteria for co-inoculation and sequential malolactic fermentation in high alcohol wine The University of Adelaide Master of Viticulture & Oenology Other Full Time Yin Liu
2016 - 2016 Co-Supervisor Selecting New Malolactic Fermentation Starter Cultures The University of Adelaide Master of Viticulture & Oenology Other Full Time Xingwei Mi

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