Mark Jenkinson

Professor Mark Jenkinson

Professor of Neuroimaging

School of Computer Science

Faculty of Engineering, Computer and Mathematical Sciences


Medical image analysis methodology - particularly applied to MRI brain imaging data. Specialist in: Segmentation of Anatomy and Pathology; Big Data Analysis; Normative Modelling; Registration and Motion Correction of MRI/FMRI Brain Images; Modelling and Reduction of MR Artefacts.

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  • Appointments

    Date Position Institution name
    2019 Professor of Neuroimaging University of Adelaide
    2014 Professor of Neuroimaging University of Oxford
  • Education

    Date Institution name Country Title
    1995 - 1999 University of Oxford United Kingdom DPhil
    1989 - 1994 University of Adelaide Australia BSc (Hons)
    1989 - 1993 University of Adelaide Australia BE (Hons)
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  • Journals

    Year Citation
    2019 Sundaresan, V., Zamboni, G., Le Heron, C., Rothwell, P., Husain, M., Battaglini, M., . . . Griffanti, L. (2019). Automated lesion segmentation with BIANCA: Impact of population-level features, classification algorithm and locally adaptive thresholding. NeuroImage, 202, 116056.
    DOI
    2019 McKavanagh, R., Torso, M., Jenkinson, M., Kolasinski, J., Stagg, C., Esiri, M., . . . Chance, S. (2019). Relating diffusion tensor imaging measurements to microstructural quantities in the cerebral cortex in multiple sclerosis. Human Brain Mapping, 40(15), 4417-4431.
    DOI
    2019 Walton, E., Hibar, D., Yilmaz, Z., Jahanshad, N., Cheung, J., Batury, V. -L., . . . Bulik, C. M. (2019). Exploration of Shared Genetic Architecture Between Subcortical Brain Volumes and Anorexia Nervosa. MOLECULAR NEUROBIOLOGY, 56(7), 5146-5156.
    DOI
    2019 Sundaresan, V., Griffanti, L., Kindalova, P., Alfaro-Almagro, F., Zamboni, G., Rothwell, P., . . . Jenkinson, M. (2019). Modelling the distribution of white matter hyperintensities due to ageing on MRI images using Bayesian inference. NeuroImage, 185, 434-445.
    DOI Scopus2 WoS2 Europe PMC1
    2019 Nobis, L., Manohar, S., Smith, S., Alfaro-Almagro, F., Jenkinson, M., Mackay, C., & Husain, M. (2019). Hippocampal volume across age: Nomograms derived from over 19,700 people in UK Biobank. NeuroImage: Clinical, 23, 13 pages.
    DOI
    2019 Mollink, J., Hiemstra, M., Miller, K., Huszar, I., Jenkinson, M., Raaphorst, J., . . . van Cappellen van Walsum, A. (2019). White matter changes in the perforant path area in patients with amyotrophic lateral sclerosis. Neuropathology and Applied Neurobiology, 45(6), 570-585.
    DOI
    2019 Saillant, A., Armstrong, I., Shah, V., Zuehlsdorff, S., Hayden, C., Declerck, J., . . . Chappell, M. (2019). Assessing Reliability of Myocardial Blood Flow After Motion Correction With Dynamic PET Using a Bayesian Framework. IEEE Transactions on Medical Imaging, 38(5), 1216-1226.
    DOI Scopus1
    2019 Baxter, L., Fitzgibbon, S., Moultrie, F., Goksan, S., Jenkinson, M., Smith, S., . . . Slater, R. (2019). Optimising neonatal fMRI data analysis: Design and validation of an extended dHCP preprocessing pipeline to characterise noxious-evoked brain activity in infants. NeuroImage, 186, 286-300.
    DOI Scopus2 WoS2 Europe PMC1
    2019 Chye, Y., Lorenzetti, V., Suo, C., Batalla, A., Cousijn, J., Goudriaan, A., . . . Solowij, N. (2019). Alteration to hippocampal volume and shape confined to cannabis dependence: a multi-site study. Addiction Biology, 24(4), 822-834.
    DOI Scopus6 WoS5 Europe PMC1
    2018 Schmid, A., Campbell, J., Hurley, S., Jbabdi, S., Andersson, J., Jenkinson, M., . . . Clare, S. (2018). Feasibility of Diffusion Tensor and Morphologic Imaging of Peripheral Nerves at Ultra-High Field Strength. Investigative Radiology, 53(12), 705-713.
    DOI Scopus1
    2018 Sundaresan, V., Zamboni, G., Le Heron, C., Rothwell, P., Husain, M., Battaglini, M., . . . Griffanti, L. (2018). Automated lesion segmentation with BIANCA: impact of population-level features, classification algorithm and locally adaptive thresholding.
    DOI
    2018 Sundaresan, V., Griffanti, L., Kindalova, P., Alfaro-Almagro, F., Zamboni, G., Rothwell, P., . . . Jenkinson, M. (2018). Modelling the distribution of white matter hyperintensities due to ageing on MRI images using Bayesian inference.
    DOI
    2018 Harston, G., Carone, D., Sheerin, F., Jenkinson, M., & Kennedy, J. (2018). Quantifying Infarct Growth and Secondary Injury Volumes: Comparing Multimodal Image Registration Measures. Stroke, 49(7), 1647-1655.
    DOI Scopus3 WoS2 Europe PMC1
    2018 Bozek, J., Makropoulos, A., Schuh, A., Fitzgibbon, S., Wright, R., Glasser, M., . . . Robinson, E. (2018). Construction of a neonatal cortical surface atlas using Multimodal Surface Matching in the Developing Human Connectome Project. NeuroImage, 179, 11-29.
    DOI Scopus3 WoS3 Europe PMC1
    2018 Zsoldos, E., Filippini, N., Mahmood, A., Mackay, C., Singh-Manoux, A., Kivimäki, M., . . . Ebmeier, K. (2018). Allostatic load as a predictor of grey matter volume and white matter integrity in old age: The Whitehall II MRI study. Scientific Reports, 8(1), 6411.
    DOI Scopus1 WoS1
    2018 Connally, E., Ward, D., Pliatsikas, C., Finnegan, S., Jenkinson, M., Boyles, R., & Watkins, K. (2018). Separation of trait and state in stuttering. Human Brain Mapping, 39(8), 3109-3126.
    DOI Scopus2 WoS1
    2018 Williamson, W., Lewandowski, A., Forkert, N., Griffanti, L., Okell, T., Betts, J., . . . Leeson, P. (2018). Association of cardiovascular risk factors with MRI indices of cerebrovascular structure and function and white matter hyperintensities in young adults. JAMA - Journal of the American Medical Association, 320(7), 665-673.
    DOI Scopus12 WoS9 Europe PMC5
    2018 Pallebage-Gamarallage, M., Foxley, S., Menke, R., Huszar, I., Jenkinson, M., Tendler, B., . . . Ansorge, O. (2018). Dissecting the pathobiology of altered MRI signal in amyotrophic lateral sclerosis: A post mortem whole brain sampling strategy for the integration of ultra-high-field MRI and quantitative neuropathology. BMC Neuroscience, 19(1), 11.
    DOI Scopus6 WoS5 Europe PMC2
    2018 Makropoulos, A., Robinson, E., Schuh, A., Wright, R., Fitzgibbon, S., Bozek, J., . . . Rueckert, D. (2018). The developing human connectome project: a minimal processing pipeline for neonatal cortical surface reconstruction. NeuroImage, 173, 88-112.
    DOI Scopus22 WoS18 Europe PMC13
    2018 Battaglini, M., Jenkinson, M., & De Stefano, N. (2018). SIENA-XL for improving the assessment of gray and white matter volume changes on brain MRI. Human Brain Mapping, 39(3), 1063-1077.
    DOI Scopus4 WoS4 Europe PMC1
    2018 Robinson, E., Garcia, K., Glasser, M., Chen, Z., Coalson, T., Makropoulos, A., . . . Rueckert, D. (2018). Multimodal surface matching with higher-order smoothness constraints. NeuroImage, 167, 453-465.
    DOI Scopus20 WoS21 Europe PMC13
    2018 Alfaro-Almagro, F., Jenkinson, M., Bangerter, N., Andersson, J., Griffanti, L., Douaud, G., . . . Smith, S. (2018). Image processing and Quality Control for the first 10,000 brain imaging datasets from UK Biobank. NeuroImage, 166, 400-424.
    DOI Scopus56 WoS44 Europe PMC30
    2018 Griffanti, L., Jenkinson, M., Suri, S., Zsoldos, E., Mahmood, A., Filippini, N., . . . Zamboni, G. (2018). Classification and characterization of periventricular and deep white matter hyperintensities on MRI: A study in older adults. NeuroImage, 170, 174-181.
    DOI Scopus23 WoS22 Europe PMC11
    2017 Rocca, M., Battaglini, M., Benedict, R., De Stefano, N., Geurts, J., Henry, R., . . . Filippi, M. (2017). Brain MRI atrophy quantification in MS. Neurology, 88(4), 403-413.
    DOI Scopus50 WoS45 Europe PMC26
    2017 Hibar, D., Adams, H., Jahanshad, N., Chauhan, G., Stein, J., Hofer, E., . . . Teumer, A. (2017). Novel genetic loci associated with hippocampal volume. Nature Communications, 8, 12 pages.
    DOI Scopus61 WoS56 Europe PMC44
    2017 Mollink, J., Kleinnijenhuis, M., Cappellen van Walsum, A., Sotiropoulos, S., Cottaar, M., Mirfin, C., . . . Miller, K. (2017). Evaluating fibre orientation dispersion in white matter: Comparison of diffusion MRI, histology and polarized light imaging. NeuroImage, 157, 561-574.
    DOI Scopus38 WoS35 Europe PMC18
    2017 Eippert, F., Kong, Y., Jenkinson, M., Tracey, I., & Brooks, J. (2017). Denoising spinal cord fMRI data: approaches to acquisition and analysis. NeuroImage, 154, 255-266.
    DOI Scopus14 WoS13 Europe PMC10
    2017 Fabes, J., Matthews, L., Filippini, N., Talbot, K., Jenkinson, M., & Turner, M. (2017). Quantitative FLAIR MRI in Amyotrophic Lateral Sclerosis. Academic Radiology, 24(10), 1187-1194.
    DOI Scopus6 WoS5 Europe PMC3
    2017 Keltner, J., Connolly, C., Vaida, F., Jenkinson, M., Fennema-Notestine, C., Archibald, S., . . . Ellis, R. (2017). HIV distal neuropathic pain is associated with smaller ventral posterior cingulate cortex. Pain Medicine (United States), 18(3), 428-440.
    DOI Scopus5 WoS5 Europe PMC4
    2017 Zamboni, G., Griffanti, L., Jenkinson, M., Mazzucco, S., Li, L., Küker, W., . . . Rothwell, P. (2017). White Matter Imaging Correlates of Early Cognitive Impairment Detected by the Montreal Cognitive Assessment after Transient Ischemic Attack and Minor Stroke. Stroke, 48(6), 1539-1547.
    DOI Scopus14 WoS15 Europe PMC9
    2017 Graham, M., Drobnjak, I., Jenkinson, M., & Zhang, H. (2017). Quantitative assessment of the susceptibility artefact and its interaction with motion in diffusion MRI. PLoS ONE, 12(10), 25 pages.
    DOI Scopus6 WoS6 Europe PMC2
    2017 Wartolowska, K., Bulte, D., Chappell, M., Jenkinson, M., Okell, T., Webster, M., & Carr, A. (2017). Using arterial spin labelling to investigate spontaneous and evoked ongoing musculoskeletal pain.
    DOI
    2017 Alfaro-Almagro, F., Jenkinson, M., Bangerter, N., Andersson, J., Griffanti, L., Douaud, G., . . . Smith, S. (2017). Image Processing and Quality Control for the first 10,000 Brain Imaging Datasets from UK Biobank.
    DOI Europe PMC1
    2017 Gorgolewski, K., Alfaro-Almagro, F., Auer, T., Bellec, P., Capotă, M., Chakravarty, M., . . . Poldrack, R. (2017). BIDS apps: improving ease of use, accessibility, and reproducibility of neuroimaging data analysis methods. PLoS Computational Biology, 13(3), e1005209.
    DOI Scopus30 WoS31 Europe PMC21
    2017 Harston, G. W., Minks, D., Sheerin, F., Payne, S. J., Chappell, M., Jezzard, P., . . . Kennedy, J. (2017). Optimizing image registration and infarct definition in stroke research. ANNALS OF CLINICAL AND TRANSLATIONAL NEUROLOGY, 4(3), 166-174.
    DOI WoS7
    2017 Goksan, S., Hartley, C., Hurley, S., Winkler, A., Duff, E., Jenkinson, M., . . . Slater, R. (2017). Optimal echo time for functional MRI of the infant brain identified in response to noxious stimulation. Magnetic Resonance in Medicine, 78(2), 625-631.
    DOI Scopus4 WoS2 Europe PMC2
    2016 Adams, H., Hibar, D., Chouraki, V., Stein, J., Nyquist, P., Rentería, M., . . . Satizabal, C. (2016). Novel genetic loci underlying human intracranial volume identified through genome-wide association. Nature Neuroscience, 19(12), 1569-1582.
    DOI Scopus63 Europe PMC45
    2016 Miller, K., Alfaro-Almagro, F., Bangerter, N., Thomas, D., Yacoub, E., Xu, J., . . . Smith, S. (2016). Multimodal population brain imaging in the UK Biobank prospective epidemiological study. Nature Neuroscience, 19(11), 1523-1536.
    DOI Scopus187 WoS170 Europe PMC119
    2016 Glasser, M., Smith, S., Marcus, D., Andersson, J., Auerbach, E., Behrens, T., . . . Van Essen, D. (2016). The Human Connectome Project's neuroimaging approach. Nature Neuroscience, 19(9), 1175-1187.
    DOI Scopus160 WoS152 Europe PMC107
    2016 Glasser, M., Coalson, T., Robinson, E., Hacker, C., Harwell, J., Yacoub, E., . . . Van Essen, D. (2016). A multi-modal parcellation of human cerebral cortex. Nature, 536(7615), 171-178.
    DOI Scopus671 WoS635 Europe PMC422
    2016 Griffanti, L., Zamboni, G., Khan, A., Li, L., Bonifacio, G., Sundaresan, V., . . . Jenkinson, M. (2016). BIANCA (Brain Intensity AbNormality Classification Algorithm): A new tool for automated segmentation of white matter hyperintensities. NeuroImage, 141, 191-205.
    DOI Scopus52 WoS49 Europe PMC26
    2016 Faull, O., Jenkinson, M., Ezra, M., & Pattinson, K. (2016). Conditioned respiratory threat in the subdivisions of the human periaqueductal gray. eLife, 5, 19 pages.
    DOI Scopus25 WoS24 Europe PMC13
    2016 Griffanti, L., Wilcock, G., Voets, N., Bonifacio, G., MacKay, C., Jenkinson, M., & Zamboni, G. (2016). Donepezil Enhances Frontal Functional Connectivity in Alzheimer's Disease: A Pilot Study. Dementia and Geriatric Cognitive Disorders Extra, 6(3), 518-528.
    DOI Scopus9
    2016 Thomas, A., Dennis, A., Rawlings, N., Stagg, C., Matthews, L., Morris, M., . . . Johansen-Berg, H. (2016). Multi-modal characterization of rapid anterior hippocampal volume increase associated with aerobic exercise. NeuroImage, 131, 162-170.
    DOI Scopus39 WoS35 Europe PMC23
    2016 Franke, B., van Hulzen, K., Arias-Vasquez, A., Bralten, J., Hoogman, M., Klein, M., . . . Jenkinson, M. (2016). Genetic influences on schizophrenia and subcortical brain volumes: Large-scale proof of concept. Nature Neuroscience, 19(3), 420-431.
    DOI Scopus99 Europe PMC70
    2016 Visser, E., Keuken, M., Forstmann, B., & Jenkinson, M. (2016). Automated segmentation of the substantia nigra, subthalamic nucleus and red nucleus in 7 T data at young and old age. NeuroImage, 139, 324-336.
    DOI Scopus18 WoS15 Europe PMC8
    2016 Visser, E., Keuken, M., Douaud, G., Gaura, V., Bachoud-Levi, A., Remy, P., . . . Jenkinson, M. (2016). Automatic segmentation of the striatum and globus pallidus using MIST: Multimodal Image Segmentation Tool. NeuroImage, 125, 479-497.
    DOI Scopus27 WoS22 Europe PMC17
    2016 Griffanti, L., Rolinski, M., Szewczyk-Krolikowski, K., Menke, R., Filippini, N., Zamboni, G., . . . Mackay, C. (2016). Challenges in the reproducibility of clinical studies with resting state fMRI: An example in early Parkinson's disease. NeuroImage, 124(Pt A), 704-713.
    DOI Scopus37 WoS34 Europe PMC25
    2016 Maumet, C., Auer, T., Bowring, A., Chen, G., Das, S., Flandin, G., . . . Nichols, T. (2016). Sharing brain mapping statistical results with the neuroimaging data model. Scientific Data, 3, 1-15.
    DOI Scopus8 WoS7 Europe PMC4
    2015 Goksan, S., Hartley, C., Emery, F., Cockrill, N., Poorun, R., Moultrie, F., . . . Slater, R. (2015). fMRI reveals neural activity overlap between adult and infant pain. eLife, 4(4), 1-13.
    DOI Scopus49 WoS60 Europe PMC17
    2015 Hibar, D., Stein, J., Renteria, M., Arias-Vasquez, A., Desrivières, S., Jahanshad, N., . . . Czisch, M. (2015). Common genetic variants influence human subcortical brain structures. Nature, 520(7546), 224-229.
    DOI Scopus337 WoS315 Europe PMC252
    2015 Harrison, S., Woolrich, M., Robinson, E., Glasser, M., Beckmann, C., Jenkinson, M., & Smith, S. (2015). Large-scale probabilistic functional modes from resting state fMRI. NeuroImage, 109, 217-231.
    DOI Scopus30 WoS30 Europe PMC21
    2015 Matthews, L., Kolind, S., Brazier, A., Leite, M., Brooks, J., Traboulsee, A., . . . Palace, J. (2015). Imaging surrogates of disease activity in neuromyelitis optica allow distinction from multiple sclerosis. PLoS ONE, 10(9), e0137715.
    DOI Scopus16 WoS15 Europe PMC11
    2015 Poynton, C., Jenkinson, M., Adalsteinsson, E., Sullivan, E., Pfefferbaum, A., & Wells, W. (2015). Quantitative susceptibility mapping by inversion of a perturbation field model: Correlation with brain iron in normal aging. IEEE Transactions on Medical Imaging, 34(1), 339-353.
    DOI Scopus16 WoS15 Europe PMC11
    2015 Faull, O., Jenkinson, M., Clare, S., & Pattinson, K. (2015). Functional subdivision of the human periaqueductal grey in respiratory control using 7tesla fMRI. NeuroImage, 113, 356-364.
    DOI Scopus31 WoS30 Europe PMC20
    2014 Dargan, D., Jenkinson, M. J., & Acton, J. D. (2014). A retrospective review of the Dall-Miles plate for periprosthetic femoral fractures: Twenty-seven cases and a review of the literature. INJURY-INTERNATIONAL JOURNAL OF THE CARE OF THE INJURED, 45(12), 1958-1963.
    DOI WoS7
    2014 Levy, A., Jenkinson, M., Ingram, W., & Allen, M. (2014). Correcting precipitation feature location in general circulation models. Journal of Geophysical Research, 119(23), 13-369.
    DOI Scopus3 WoS3
    2014 Abdollahi, R., Kolster, H., Glasser, M., Robinson, E., Coalson, T., Dierker, D., . . . Orban, G. (2014). Correspondences between retinotopic areas and myelin maps in human visual cortex. NeuroImage, 99, 509-524.
    DOI Scopus67 WoS62 Europe PMC50
    2014 Sampaio-Baptista, C., Scholz, J., Jenkinson, M., Thomas, A., Filippini, N., Smit, G., . . . Johansen-Berg, H. (2014). Gray matter volume is associated with rate of subsequent skill learning after a long term training intervention. NeuroImage, 96, 158-166.
    DOI Scopus34 WoS28 Europe PMC21
    2014 Tziortzi, A., Haber, S., Searle, G., Tsoumpas, C., Long, C., Shotbolt, P., . . . Gunn, R. (2014). Connectivity-based functional analysis of dopamine release in the striatum using diffusion-weighted MRI and positron emission tomography. Cerebral Cortex, 24(5), 1165-1177.
    DOI Scopus110 WoS106 Europe PMC76
    2014 Menke, R., Szewczyk-Krolikowski, K., Jbabdi, S., Jenkinson, M., Talbot, K., Mackay, C., & Hu, M. (2014). Comprehensive morphometry of subcortical grey matter structures in early-stage Parkinson's disease. Human Brain Mapping, 35(4), 1681-1690.
    DOI Scopus52 WoS49 Europe PMC39
    2014 Tijssen, R., Jenkinson, M., Brooks, J., Jezzard, P., & Miller, K. (2014). Optimizing RetroICor and RetroKCor corrections for multi-shot 3D FMRI acquisitions. NeuroImage, 84, 394-405.
    DOI Scopus7 WoS5 Europe PMC6
    2014 Levy, A., Jenkinson, M., Ingram, W., Lambert, F., Huntingford, C., & Allen, M. (2014). Increasing the detectability of external influence on precipitation by correcting feature location in GCMs. Journal of Geophysical Research Atmospheres, 119(22), 12466-12478.
    DOI Scopus6 WoS5
    2014 Mennes, M., Jenkinson, M., Valabregue, R., Buitelaar, J., Beckmann, C., & Smith, S. (2014). Optimizing full-brain coverage in human brain MRI through population distributions of brain size. NeuroImage, 98, 513-520.
    DOI Scopus11 WoS9 Europe PMC10
    2014 Robinson, E., Jbabdi, S., Glasser, M., Andersson, J., Burgess, G., Harms, M., . . . Jenkinson, M. (2014). MSM: A new flexible framework for multimodal surface matching. NeuroImage, 100, 414-426.
    DOI Scopus119 WoS115 Europe PMC92
    2014 Millington, R., Yasuda, C., Jindahra, P., Jenkinson, M., Barbur, J., Kennard, C., . . . Bridge, H. (2014). Quantifying the pattern of optic tract degeneration in human hemianopia. Journal of Neurology, Neurosurgery and Psychiatry, 85(4), 379-386.
    DOI Scopus12 WoS10 Europe PMC8
    2014 Filippini, N., Zsoldos, E., Haapakoski, R., Sexton, C., Mahmood, A., Allan, C., . . . Ebmeier, K. (2014). Study protocol: The Whitehall II imaging sub-study. BMC Psychiatry, 14(1), 16 pages.
    DOI Scopus31 WoS29 Europe PMC25
    2014 Thompson, P., Stein, J., Medland, S., Hibar, D., Vasquez, A., Renteria, M., . . . Jenkinson, M. (2014). The ENIGMA Consortium: Large-scale collaborative analyses of neuroimaging and genetic data. Brain Imaging and Behavior, 8(2), 153-182.
    DOI Scopus293 WoS237 Europe PMC176
    2013 Sotiropoulos, S., Jbabdi, S., Xu, J., Andersson, J., Moeller, S., Auerbach, E., . . . Behrens, T. (2013). Advances in diffusion MRI acquisition and processing in the Human Connectome Project. NeuroImage, 80, 125-143.
    DOI Scopus345 WoS324 Europe PMC242
    2013 Matthews, L., Marasco, R., Jenkinson, M., Küker, W., Luppe, S., Leite, M., . . . Palace, J. (2013). Distinction of seropositive NMO spectrum disorder and MS brain lesion distribution. Neurology, 80(14), 1330-1337.
    DOI Scopus108 WoS84 Europe PMC68
    2013 Levy, A., Ingram, W., Jenkinson, M., Huntingford, C., Lambert, F., & Allen, M. (2013). Can correcting feature location in simulated mean climate improve agreement on projected changes?. Geophysical Research Letters, 40(2), 354-358.
    DOI Scopus17 WoS17
    2013 Glasser, M., Sotiropoulos, S., Wilson, J., Coalson, T., Fischl, B., Andersson, J., . . . Jenkinson, M. (2013). The minimal preprocessing pipelines for the Human Connectome Project. NeuroImage, 80, 105-124.
    DOI Scopus886 WoS832 Europe PMC567
    2013 Stagg, C., Knight, S., Jenkinson, M., Maudsley, A., & Turner, M. (2013). Whole-brain magnetic resonance spectroscopic imaging measures are related to disability in ALS. Neurology, 80(7), 610-615.
    DOI Scopus35 WoS36 Europe PMC30
    2013 Arun, T., Tomassini, V., Sbardella, E., De Ruiter, M., Matthews, L., Leite, M., . . . Palace, J. (2013). Targeting ASIC1 in primary progressive multiple sclerosis: Evidence of neuroprotection with amiloride. Brain, 136(1), 106-115.
    DOI Scopus75 WoS68 Europe PMC55
    2013 Smith, S., Vidaurre, D., Beckmann, C., Glasser, M., Jenkinson, M., Miller, K., . . . Van Essen, D. (2013). Functional connectomics from resting-state fMRI. Trends in Cognitive Sciences, 17(12), 666-682.
    DOI Scopus333 WoS304 Europe PMC244
    2013 Brooks, J., Faull, O., Pattinson, K., & Jenkinson, M. (2013). Physiological noise in brainstem fMRI. Frontiers in Human Neuroscience, 7(OCT), 13 pages.
    DOI Scopus86 WoS79 Europe PMC67
    2013 Vrenken, H., Jenkinson, M., Horsfield, M., Battaglini, M., Van Schijndel, R., Rostrup, E., . . . De Stefano, N. (2013). Recommendations to improve imaging and analysis of brain lesion load and atrophy in longitudinal studies of multiple sclerosis. Journal of Neurology, 260(10), 2458-2471.
    DOI Scopus68 WoS68 Europe PMC49
    2013 Zamboni, G., Wilcock, G., Douaud, G., Drazich, E., McCulloch, E., Filippini, N., . . . MacKay, C. (2013). Resting functional connectivity reveals residual functional activity in Alzheimer's disease. Biological Psychiatry, 74(5), 375-383.
    DOI Scopus34 WoS31 Europe PMC24
    2013 Marcus, D., Harms, M., Snyder, A., Jenkinson, M., Wilson, J., Glasser, M., . . . Van Essen, D. (2013). Human Connectome Project informatics: Quality control, database services, and data visualization. NeuroImage, 80, 202-219.
    DOI Scopus112 WoS105 Europe PMC76
    2013 Heinrich, M., Jenkinson, M., Brady, M., & Schnabel, J. (2013). MRF-Based deformable registration and ventilation estimation of lung CT. IEEE Transactions on Medical Imaging, 32(7), 1239-1248.
    DOI Scopus92 WoS70 Europe PMC21
    2013 Zamboni, G., Drazich, E., McCulloch, E., Filippini, N., Mackay, C., Jenkinson, M., . . . Wilcock, G. (2013). Neuroanatomy of impaired self-awareness in Alzheimer's disease and mild cognitive impairment. Cortex, 49(3), 668-678.
    DOI Scopus45 WoS40 Europe PMC27
    2013 Zamboni, G., de Jager, C., Drazich, E., Douaud, G., Jenkinson, M., Smith, A., . . . Wilcock, G. (2013). Structural and functional bases of visuospatial associative memory in older adults. Neurobiology of Aging, 34(3), 961-972.
    DOI Scopus11 WoS10 Europe PMC9
    2013 Robinson, E., Jbabdi, S., Andersson, J., Smith, S., Glasser, M., Van Essen, D., . . . Jenkinson, M. (2013). Multimodal surface matching: Fast and generalisable cortical registration using discrete optimisation. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 7917 LNCS, 475-486.
    DOI Scopus21 Europe PMC4
    2012 Kolasinski, J., Stagg, C., Chance, S., Deluca, G., Esiri, M., Chang, E., . . . Johansen-Berg, H. (2012). A combined post-mortem magnetic resonance imaging and quantitative histological study of multiple sclerosis pathology. Brain, 135(10), 2938-2951.
    DOI Scopus77 WoS75 Europe PMC54
    2012 Jenkinson, M., Beckmann, C., Behrens, T., Woolrich, M., & Smith, S. (2012). FSL. NeuroImage, 62(2), 782-790.
    DOI Scopus3106 WoS2955 Europe PMC2195
    2012 Kong, Y., Jenkinson, M., Andersson, J., Tracey, I., & Brooks, J. (2012). Assessment of physiological noise modelling methods for functional imaging of the spinal cord. NeuroImage, 60(2), 1538-1549.
    DOI Scopus49 WoS46 Europe PMC37
    2012 Smith, S., Miller, K., Moeller, S., Xu, J., Auerbach, E., Woolrich, M., . . . Ugurbil, K. (2012). Temporally-independent functional modes of spontaneous brain activity. Proceedings of the National Academy of Sciences of the United States of America, 109(8), 3131-3136.
    DOI Scopus455 WoS438 Europe PMC313
    2012 Heinrich, M., Jenkinson, M., Bhushan, M., Matin, T., Gleeson, F., Brady, S., & Schnabel, J. (2012). MIND: Modality independent neighbourhood descriptor for multi-modal deformable registration. Medical Image Analysis, 16(7), 1423-1435.
    DOI Scopus239 WoS201 Europe PMC81
    2012 Battaglini, M., Jenkinson, M., & De Stefano, N. (2012). Evaluating and reducing the impact of white matter lesions on brain volume measurements. Human Brain Mapping, 33(9), 2062-2071.
    DOI Scopus134 WoS125 Europe PMC99
    2012 Sexton, C., Le Masurier, M., Allan, C., Jenkinson, M., McDermott, L., Kalu, U., . . . Ebmeier, K. (2012). Magnetic resonance imaging in late-life depression: Vascular and glucocorticoid cascade hypotheses. British Journal of Psychiatry, 201(1), 46-51.
    DOI Scopus32 WoS26 Europe PMC22
    2012 Popescu, V., Battaglini, M., Hoogstrate, W., Verfaillie, S., Sluimer, I., van Schijndel, R., . . . Yousry, T. (2012). Optimizing parameter choice for FSL-Brain Extraction Tool (BET) on 3D T1 images in multiple sclerosis. NeuroImage, 61(4), 1484-1494.
    DOI Scopus83 WoS78 Europe PMC56
    2012 Stein, J., Medland, S., Vasquez, A., Hibar, D., Senstad, R., Winkler, A., . . . Mühleisen, T. (2012). Identification of common variants associated with human hippocampal and intracranial volumes. Nature Genetics, 44(5), 552-561.
    DOI Scopus382 WoS364 Europe PMC306
    2012 Brooks, J., Kong, Y., Lee, M., Warnaby, C., Wanigasekera, V., Jenkinson, M., & Tracey, I. (2012). Stimulus site and modality dependence of functional activity within the human spinal cord. Journal of Neuroscience, 32(18), 6231-6239.
    DOI Scopus29 WoS27 Europe PMC26
    2012 Tondelli, M., Wilcock, G., Nichelli, P., de Jager, C., Jenkinson, M., & Zamboni, G. (2012). Structural MRI changes detectable up to ten years before clinical Alzheimer's disease. Neurobiology of Aging, 33(4), 825.e25-825.e36.
    DOI Scopus117 WoS109 Europe PMC58
    2012 Wartolowska, K., Hough, M., Jenkinson, M., Andersson, J., Wordsworth, B., & Tracey, I. (2012). Structural changes of the brain in rheumatoid arthritis. Arthritis and Rheumatism, 64(2), 371-379.
    DOI Scopus64 WoS54 Europe PMC39
    2012 Kincses, Z., Szabó, N., Valálik, I., Kopniczky, Z., Dézsi, L., Klivényi, P., . . . Vécsei, L. (2012). Target identification for stereotactic thalamotomy using diffusion tractography. PLoS ONE, 7(1), 7 pages.
    DOI Scopus17 WoS17 Europe PMC10
    2012 Gelineau-Morel, R., Tomassini, V., Jenkinson, M., Johansen-Berg, H., Matthews, P., & Palace, J. (2012). The effect of hypointense white matter lesions on automated gray matter segmentation in multiple sclerosis. Human Brain Mapping, 33(12), 2802-2814.
    DOI Scopus70 WoS67 Europe PMC51
    2011 Sallet, J., Mars, R., Noonan, M., Andersson, J., O'Reilly, J., Jbabdi, S., . . . Rushworth, M. (2011). Social network size affects neural circuits in Macaques. Science, 334(6056), 697-700.
    DOI Scopus216 WoS205 Europe PMC150
    2011 Murphy, K., Van Ginneken, B., Reinhardt, J., Kabus, S., Ding, K., Deng, X., . . . Pluim, J. (2011). Evaluation of registration methods on thoracic CT: The EMPIRE10 challenge. IEEE Transactions on Medical Imaging, 30(11), 1901-1920.
    DOI Scopus254 WoS239 Europe PMC142
    2011 Kincses, Z., Ropele, S., Jenkinson, M., Khalil, M., Petrovic, K., Loitfelder, M., . . . Enzinger, C. (2011). Lesion probability mapping to explain clinical deficits and cognitive performance in multiple sclerosis. Multiple Sclerosis Journal, 17(6), 681-689.
    DOI Scopus52 WoS51 Europe PMC32
    2011 Tziortzi, A., Searle, G., Tzimopoulou, S., Salinas, C., Beaver, J., Jenkinson, M., . . . Gunn, R. (2011). Imaging dopamine receptors in humans with [<sup>11</sup>C]-(+)-PHNO: Dissection of D3 signal and anatomy. NeuroImage, 54(1), 264-277.
    DOI Scopus226 WoS206 Europe PMC164
    2011 Patenaude, B., Smith, S., Kennedy, D., & Jenkinson, M. (2011). A Bayesian model of shape and appearance for subcortical brain segmentation. NeuroImage, 56(3), 907-922.
    DOI Scopus1046 WoS990 Europe PMC781
    2011 Miller, K., Stagg, C., Douaud, G., Jbabdi, S., Smith, S., Behrens, T., . . . McNab, J. (2011). Diffusion imaging of whole, post-mortem human brains on a clinical MRI scanner. NeuroImage, 57(1), 167-181.
    DOI Scopus141 WoS134 Europe PMC113
    2011 Nunes, R., Drobnjak, I., Clare, S., Jezzard, P., & Jenkinson, M. (2011). Performance of single spin-echo and doubly refocused diffusion-weighted sequences in the presence of eddy current fields with multiple components. Magnetic Resonance Imaging, 29(5), 659-667.
    DOI Scopus6 WoS5 Europe PMC4
    2011 Bishop, C., Jenkinson, M., Andersson, J., Declerck, J., & Merhof, D. (2011). Novel Fast Marching for Automated Segmentation of the Hippocampus (FMASH): Method and validation on clinical data. NeuroImage, 55(3), 1009-1019.
    DOI Scopus20 WoS17 Europe PMC11
    2011 Marcus, D., Harwell, J., Olsen, T., Hodge, M., Glasser, M., Prior, F., . . . Van Essen, D. (2011). Informatics and data mining tools and strategies for the human connectome project. Frontiers in Neuroinformatics, 5.
    DOI Scopus138
    2010 Zarei, M., Patenaude, B., Damoiseaux, J., Morgese, C., Smith, S., Matthews, P., . . . Jenkinson, M. (2010). Combining shape and connectivity analysis: An MRI study of thalamic degeneration in Alzheimer's disease. NeuroImage, 49(1), 1-8.
    DOI Scopus111 WoS108 Europe PMC79
    2010 Babalola, K., Patenaude, B., Aljabar, P., Schnabel, J., Kennedy, D., Crum, W., . . . Rueckert, D. (2010). Corrigendum to "An evaluation of four automatic methods of segmenting the subcortical structures in the brain" [NeuroImage 47 (2009) 1435-1447] (DOI:10.1016/j.neuroimage.2009.05.029). NeuroImage, 49(1), 1152.
    DOI
    2010 Gallichan, D., Andersson, J., Jenkinson, M., Robson, M., & Miller, K. (2010). Reducing distortions in diffusion-weighted echo planar imaging with a dual-echo blip-reversed sequence. Magnetic Resonance in Medicine, 64(2), 382-390.
    DOI Scopus31 WoS29 Europe PMC21
    2010 Drobnjak, I., Pell, G., & Jenkinson, M. (2010). Simulating the effects of time-varying magnetic fields with a realistic simulated scanner. Magnetic Resonance Imaging, 28(7), 1014-1021.
    DOI Scopus18 WoS17 Europe PMC11
    2010 Zarei, M., Patenaude, B., Damoiseaux, J., Morgese, C., Smith, S., Matthews, P., . . . Jenkinson, M. (2010). Erratum to Combining shape and connectivity analysis: An MRI study of thalamic degeneration in Alzheimer's disease [NeuroImage, 49, (2010), 1-8]. NeuroImage, 51(2), 940.
    DOI Scopus1 WoS1
    2009 Woolrich, M., Jbabdi, S., Patenaude, B., Chappell, M., Makni, S., Behrens, T., . . . Smith, S. (2009). Bayesian analysis of neuroimaging data in FSL.. NeuroImage, 45(1 Suppl), S173-S186.
    DOI Scopus1150 WoS1094 Europe PMC823
    2009 Babalola, K., Patenaude, B., Aljabar, P., Schnabel, J., Kennedy, D., Crum, W., . . . Rueckert, D. (2009). An evaluation of four automatic methods of segmenting the subcortical structures in the brain. NeuroImage, 47(4), 1435-1447.
    DOI Scopus139 WoS120 Europe PMC62
    2009 Klein, A., Andersson, J., Ardekani, B., Ashburner, J., Avants, B., Chiang, M., . . . Parsey, R. (2009). Evaluation of 14 nonlinear deformation algorithms applied to human brain MRI registration. NeuroImage, 46(3), 786-802.
    DOI Scopus1253 WoS1162 Europe PMC862
    2009 Sun, D., Stuart, G., Jenkinson, M., Wood, S., McGorry, P., Velakoulis, D., . . . Pantelis, C. (2009). Brain surface contraction mapped in first-episode schizophrenia: A longitudinal magnetic resonance imaging study. Molecular Psychiatry, 14(10), 976-986.
    DOI Scopus90 WoS79 Europe PMC63
    2008 Brooks, J., Beckmann, C., Miller, K., Wise, R., Porro, C., Tracey, I., & Jenkinson, M. (2008). Physiological noise modelling for spinal functional magnetic resonance imaging studies. NeuroImage, 39(2), 680-692.
    DOI Scopus126 WoS118 Europe PMC95
    2008 Harvey, A., Pattinson, K., Brooks, J., Mayhew, S., Jenkinson, M., & Wise, R. (2008). Brainstem functional magnetic resonance imaging: Disentangling signal from physiological noise. Journal of Magnetic Resonance Imaging, 28(6), 1337-1344.
    DOI Scopus94 WoS87 Europe PMC71
    2007 Smith, S., Jenkinson, M., Beckmann, C., Miller, K., & Woolrich, M. (2007). Meaningful design and contrast estimability in FMRI. NeuroImage, 34(1), 127-136.
    DOI Scopus40 WoS38 Europe PMC31
    2007 Smith, S., Rao, A., De Stefano, N., Jenkinson, M., Schott, J., Matthews, P., & Fox, N. (2007). Longitudinal and cross-sectional analysis of atrophy in Alzheimer's disease: Cross-validation of BSI, SIENA and SIENAX. NeuroImage, 36(4), 1200-1206.
    DOI Scopus86 WoS85 Europe PMC67
    2007 Douaud, G., Smith, S., Jenkinson, M., Behrens, T., Johansen-Berg, H., Vickers, J., . . . James, A. (2007). Anatomically related grey and white matter abnormalities in adolescent-onset schizophrenia. Brain, 130(9), 2375-2386.
    DOI Scopus439 WoS424 Europe PMC350
    2007 Smith, S., Johansen-Berg, H., Jenkinson, M., Nichols, T., Miller, K., Klein, J., . . . Behrens, T. (2007). Acquisition and voxelwise analysis of multi-subject diffusion data with tract-based spatial statistics. Nature Protocols, 2(3), 499-503.
    DOI Scopus418 WoS400 Europe PMC340
    2007 Bartsch, A., Homola, G., Biller, A., Smith, S., Weijers, H., Wiesbeck, G., . . . Bendszus, M. (2007). Manifestations of early brain recovery associated with abstinence from alcoholism. Brain, 130(1), 36-47.
    DOI Scopus141 WoS116 Europe PMC91
    2007 Smith, S., Johansen-Berg, H., Jenkinson, M., Rueckert, D., Nichols, T., Miller, K., . . . Behrens, T. (2007). Erratum: Acquisition and voxelwise analysis of multi-subject diffusion data with Tract-Based Spatial Statistics (Nature Protocols (2007) (499-503) 10.1038/nprot.2007.45). Nature Protocols, 2(3).
    2007 Zarei, M., Johansen-Berg, H., Jenkinson, M., Ciccarelli, O., Thompson, A., & Matthews, P. (2007). Two-dimensional population map of cortical connections in the human internal capsule. Journal of Magnetic Resonance Imaging, 25(1), 48-54.
    DOI Scopus44 WoS44 Europe PMC34
    2007 Bannister, P., Michael Brady, J., & Jenkinson, M. (2007). Integrating temporal information with a non-rigid method of motion correction for functional magnetic resonance images. Image and Vision Computing, 25(3), 311-320.
    DOI Scopus16 WoS13
    2006 Beckmann, C., Jenkinson, M., Woolrich, M., Behrens, T., Flitney, D., Devlin, J., & Smith, S. (2006). Applying FSL to the FIAC data: Model-based and model-free analysis of voice and sentence repetition priming. Human Brain Mapping, 27(5), 380-391.
    DOI Scopus44 WoS42 Europe PMC36
    2006 Drobnjak, I., Gavaghan, D., Süli, E., Pitt-Francis, J., & Jenkinson, M. (2006). Development of a functional magnetic resonance imaging simulator for modeling realistic rigid-body motion artifacts. Magnetic Resonance in Medicine, 56(2), 364-380.
    DOI Scopus52 WoS51 Europe PMC36
    2006 Behrens, T., Jenkinson, M., Robson, M., Smith, S., & Johansen-Berg, H. (2006). A consistent relationship between local white matter architecture and functional specialisation in medial frontal cortex. NeuroImage, 30(1), 220-227.
    DOI Scopus46 WoS42 Europe PMC36
    2006 Smith, S., Jenkinson, M., Johansen-Berg, H., Rueckert, D., Nichols, T., Mackay, C., . . . Behrens, T. (2006). Tract-based spatial statistics: Voxelwise analysis of multi-subject diffusion data. NeuroImage, 31(4), 1487-1505.
    DOI Scopus3655 WoS3511 Europe PMC2892
    2005 Smith, S., Beckmann, C., Ramnani, N., Woolrich, M., Bannister, P., Jenkinson, M., . . . McGonigle, D. (2005). Variability in fMRI: A re-examination of inter-session differences. Human Brain Mapping, 24(3), 248-257.
    DOI Scopus135 WoS122 Europe PMC93
    2005 Österbauer, R., Matthews, P., Jenkinson, M., Beckmann, C., Hansen, P., & Calvert, G. (2005). Color of scents: Chromatic stimuli modulate odor responses in the human brain. Journal of Neurophysiology, 93(6), 3434-3441.
    DOI Scopus97 WoS88 Europe PMC40
    2005 Bridge, H., Clare, S., Jenkinson, M., Jezzard, P., Parker, A., & Matthews, P. (2005). Independent anatomical and functional measures of the V1/V2 boundary in human visual cortex. Journal of Vision, 5(2), 93-102.
    DOI Scopus79 WoS75 Europe PMC56
    2004 Woolrich, M., Jenkinson, M., Brady, J., & Smith, S. (2004). Fully Bayesian Spatio-Temporal Modeling of FMRI Data. IEEE Transactions on Medical Imaging, 23(2), 213-231.
    DOI Scopus179 WoS171 Europe PMC80
    2004 Jenkinson, M., Wilson, J., & Jezzard, P. (2004). Perturbation method for magnetic field calculations of nonconductive objects. Magnetic Resonance in Medicine, 52(3), 471-477.
    DOI Scopus45 WoS40 Europe PMC32
    2004 Woolrich, M., Behrens, T., Beckmann, C., Jenkinson, M., & Smith, S. (2004). Multilevel linear modelling for FMRI group analysis using Bayesian inference. NeuroImage, 21(4), 1732-1747.
    DOI Scopus886 WoS867 Europe PMC735
    2004 Bannister, P., Michael Brady, J., & Jenkinson, M. (2004). TIGER - A new model for spatio-temporal realignment of FMRI data. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 3117, 292-303.
    Scopus5 WoS5
    2004 Freire, L., Orchard, J., Jenkinson, M., & Mangin, J. (2004). Reducing Activation-Related Bias in FMRI Registration. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 3150, 278-285.
    Scopus3 WoS2
    2003 Parry, A., Clare, S., Jenkinson, M., Smith, S., Palace, J., & Matthews, P. (2003). MRI brain T1 relaxation time changes in MS patients increase over time in both the white matter and the cortex. Journal of Neuroimaging, 13(3), 234-239.
    DOI Scopus34 WoS32 Europe PMC28
    2003 Wilson, J., Jenkinson, M., & Jezzard, P. (2003). Protocol to determine the optimal intraoral passive shim for minimisation of susceptibility artifact in human inferior frontal cortex. NeuroImage, 19(4), 1802-1811.
    DOI Scopus20 WoS21 Europe PMC13
    2003 Walters, N., Egan, G., Kril, J., Kean, M., Waley, P., Jenkinson, M., & Watson, J. (2003). In vivo identification of human cortical areas using high-resolution MRI: An approach to cerebral structure-function correlation. Proceedings of the National Academy of Sciences of the United States of America, 100(5), 2981-2986.
    DOI Scopus122 WoS114 Europe PMC91
    2003 Freire, L., & Jenkinson, M. (2003). A gradient-informed robust motion correction method for FMRI. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 2717, 377-386.
    Scopus1 WoS1
    2003 Beckmann, C., Jenkinson, M., & Smith, S. (2003). General multilevel linear modeling for group analysis in FMRI. NeuroImage, 20(2), 1052-1063.
    DOI Scopus962 WoS946 Europe PMC779
    2003 Jenkinson, M. (2003). Fast, automated, N-dimensional phase-unwrapping algorithm. Magnetic Resonance in Medicine, 49(1), 193-197.
    DOI Scopus448 WoS429 Europe PMC337
    2003 Behrens, T., Woolrich, M., Jenkinson, M., Johansen-Berg, H., Nunes, R., Clare, S., . . . Smith, S. (2003). Characterization and Propagation of Uncertainty in Diffusion-Weighted MR Imaging. Magnetic Resonance in Medicine, 50(5), 1077-1088.
    DOI Scopus1762 WoS1675 Europe PMC1323
    2002 Wilson, J., Jenkinson, M., & Jezzard, P. (2002). Optimization of static field homogeneity in human brain using diamagnetic passive shims. Magnetic Resonance in Medicine, 48(5), 906-914.
    DOI Scopus76 WoS72 Europe PMC63
    2002 Jenkinson, M., & Brady, M. (2002). A saliency-based hierarchy for local symmetries. Image and Vision Computing, 20(2), 85-101.
    DOI Scopus5 WoS5
    2002 Parry, A., Clare, S., Jenkinson, M., Smith, S., Palace, J., & Matthews, P. (2002). White matter and lesion T1 relaxation times increase in parallel and correlate with disability in multiple sclerosis. Journal of Neurology, 249(9), 1279-1286.
    DOI Scopus78 WoS67 Europe PMC58
    2002 Jenkinson, M., Bannister, P., Brady, M., & Smith, S. (2002). Improved optimization for the robust and accurate linear registration and motion correction of brain images. NeuroImage, 17(2), 825-841.
    DOI Scopus5240 WoS5107 Europe PMC4282
    2002 Wilson, J., Jenkinson, M., De Araujo, I., Kringelbach, M., Rolls, E., & Jezzard, P. (2002). Fast, fully automated global and local magnetic field optimization for fMRI of the human brain. NeuroImage, 17(2), 967-976.
    DOI Scopus126 WoS122 Europe PMC101
    2002 Smith, S., Zhang, Y., Jenkinson, M., Chen, J., Matthews, P., Federico, A., & De Stefano, N. (2002). Accurate, robust, and automated longitudinal and cross-sectional brain change analysis. NeuroImage, 17(1), 479-489.
    DOI Scopus1265 WoS1217 Europe PMC963
    2001 Smith, S., De Stefano, N., Jenkinson, M., & Matthews, P. (2001). Normalized accurate measurement of longitudinal brain change. Journal of Computer Assisted Tomography, 25(3), 466-475.
    DOI Scopus362 WoS345 Europe PMC259
    2001 Jenkinson, M., & Smith, S. (2001). A global optimisation method for robust affine registration of brain images. Medical Image Analysis, 5(2), 143-156.
    DOI Scopus3718 WoS3591 Europe PMC2931
    2000 Reddy, H., Narayanan, S., Arnoutelis, R., Jenkinson, M., Antel, J., Matthews, P., & Arnold, D. (2000). Evidence for adaptive functional changes in the cerebral cortex with axonal injury from multiple sclerosis. Brain, 123(11), 2314-2320.
    DOI Scopus242 WoS227 Europe PMC154
    2000 Jenkinson, M., & Smith, S. (2000). Global optimisation for robust affine registration. NeuroImage, 11(5 PART II).
    Scopus3
    2000 Matthews, P., Piniero, R., Johannssen-Berg, H., Pendlebury, S., Lee, M., Reddy, H., . . . Arnold, D. (2000). Adaptive local reorganisation of primary motor cortex after brain injury. NeuroImage, 11(5 PART II).
    2000 Lee, M., Reddy, H., Johansen-Berg, H., Pendlebury, S., Jenkinson, M., Smith, S., . . . Matthews, P. (2000). The motor cortex shows adaptive functional changes to brain injury from multiple sclerosis. Annals of Neurology, 47(5), 606-613.
    DOI Scopus238 WoS217 Europe PMC149
    1997 MonWilliams, M., Wann, J., Jenkinson, M., & Rushton, K. (1997). Synaesthesia in the normal limb. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 264(1384), 1007-1010.
    DOI WoS62
    1994 DANBURY, R., & JENKINSON, M. (1994). SYNCHRONIZED SERVOMECHANISMS - THE SCALAR-FIELD APPROACH. IEE PROCEEDINGS-CONTROL THEORY AND APPLICATIONS, 141(4), 261-273.
    DOI WoS7
  • Books

    Year Citation
    2017 Arbel, T., Cardoso, M., Chung, A., Jenkinson, M., Ribbens, A., & Wells, W. (2017). Medical Computer Vision and Bayesian and Graphical Models for Biomedical Imaging: MICCAI 2016 International Workshops, MCV and BAMBI, Athens, Greece, October 21, 2016, Revised Selected Papers (Vol. 10081 LNCS). H. Muller, B. Kelm, T. Arbel, W. CaI, M. Cardoso, G. Langs, . . . A. Ribbens (Eds.), Springer International Publishing AG.
    2017 Arbel, T., Cardoso, M., Chung, A., Jenkinson, M., Ribbens, A., & Wells, W. (2017). Medical Computer Vision and Bayesian and Graphical Models for Biomedical Imaging: MICCAI 2016 International Workshops, MCV and BAMBI, Athens, Greece, October 21, 2016, Revised Selected Papers (Vol. 10081 LNCS). H. Muller, B. Kelm, T. Arbel, W. CaI, M. Cardoso, G. Langs, . . . A. Ribbens (Eds.), Springer International Publishing AG.
  • Book Chapters

    Year Citation
    2012 Jenkinson, M. (2012). Registration, atlases and cortical flattening. In Functional Magnetic Resonance Imaging: An Introduction to Methods.
    DOI
    2001 Jenkinson, M., & Smith, S. (2001). The role of registration in functional magnetic resonance imaging. In Medical Image Registration (pp. 183-198).
    Scopus4
  • Conference Papers

    Year Citation
    2018 Saillant, A., Platsch, G., Shah, V., Zuehlsdorff, S., Jenkinson, M., & Chappell, M. (2018). Reliability of myocardial blood flow estimates in abnormal scans. In JOURNAL OF NUCLEAR MEDICINE Vol. 59 (pp. 2 pages). Philadelphia, PA: SOC NUCLEAR MEDICINE INC.
    2017 Saillant, A., Saint, K., Memmott, M., Armstrong, I., Shah, V., Zuehlsdorff, S., . . . Chappell, M. (2017). Estimation and reliability of myocardial blood flow after motion correction with dynamic PET using a Bayesian framework. In EUROPEAN JOURNAL OF NUCLEAR MEDICINE AND MOLECULAR IMAGING Vol. 44 (pp. S356). SPRINGER.
    2016 Battaglini, M., Jenkinson, M., & De Stefano, N. (2016). SIENA-XL for the assessment of gray matter and white matter volume changes in clinical studies of patients with multiple sclerosis.. In MULTIPLE SCLEROSIS JOURNAL Vol. 22 (pp. 841). London, ENGLAND: SAGE PUBLICATIONS LTD.
    2016 Bozek, J., Fitzgibbon, S., Wright, R., Rueckert, D., Jenkinson, M., & Robinson, E. (2016). Construction of a neonatal cortical surface atlas using multimodal surface matching. In Proceedings - International Symposium on Biomedical Imaging Vol. 2016-June (pp. 775-778). online: IEEE.
    DOI Scopus7 WoS4
    2016 Arya, Z., Griffanti, L., Mackay, C., & Jenkinson, M. (2016). Iterative dual LDA: A novel classification algorithm for resting state fMRI. In Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) Vol. 10019 LNCS (pp. 279-286). Netherlands: Springer.
    DOI
    2015 Battaglini, M., Jenkinson, M., & De Stefano, N. (2015). Improving measurement errors in the assessment of GM and WM volume changes using a new sienax procedure. In MULTIPLE SCLEROSIS JOURNAL Vol. 21 (pp. 495). Barcelona, SPAIN: SAGE PUBLICATIONS LTD.
    2015 Zamboni, G., Griffanti, L., Bonifacio, G., Mazzucco, S., Khan, A., Pendlebury, S., . . . Rothwell, P. (2015). Association between macroscopic and microstructural white matter damage and cognition in vascular cognitive impairment. In INTERNATIONAL JOURNAL OF STROKE Vol. 10 (pp. 381). WILEY-BLACKWELL.
    2015 Griffanti, L., Zamboni, G., Khan, A., Bonifacio, G., Li, L., Mazzucco, S., . . . Jenkinson, M. (2015). Validation of automated segmentation of white matter hyperintensities on MRI: Correlation with cognitive function after TIA and stroke. In INTERNATIONAL JOURNAL OF STROKE Vol. 10 (pp. 62). WILEY-BLACKWELL.
    2014 Matthews, L., Kolind, S., Brazier, A., Leite, M., Brooks, J., Jenkinson, M., . . . Palace, J. (2014). Inflammation does not cause chronic global neurodegeneration in NMO? A longitudinal multimodel quantitative MRI study comparing NMO and MS. In MULTIPLE SCLEROSIS JOURNAL Vol. 20 (pp. 282). Boston, MA: SAGE PUBLICATIONS LTD.
    2013 Battaglini, M., Jenkinson, M., Giorgio, A., Rocca, M., Filippi, M., Palace, J., & De Stefano, N. (2013). Improved MRI-derived assessment of grey and white matter volumes by using SIENAX. In MULTIPLE SCLEROSIS JOURNAL Vol. 19 (pp. 424-425). Copenhagen, DENMARK: SAGE PUBLICATIONS LTD.
    2013 Arun, T., Tomassini, V., Sbardella, E., de Ruiter, M., Matthews, L., Leite, M., . . . Palace, J. (2013). ASIC1 Blockade in Primary Progressive Multiple Sclerosis: Evidence of Neuroprotection with Amiloride. In NEUROLOGY Vol. 80 (pp. 1 page). San Diego, CA: LIPPINCOTT WILLIAMS & WILKINS.
    2013 Heinrich, M., Jenkinson, M., Papiez, B., Glesson, F., Brady, S., & Schnabel, J. (2013). Edge- and detail-preserving sparse image representations for deformable registration of chest MRI and CT volumes. In Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) Vol. 7917 LNCS (pp. 463-474). Germany.
    DOI Scopus13 Europe PMC3
    2013 Heinrich, M., Jenkinson, M., Papiez, B., Brady, S., & Schnabel, J. (2013). Towards realtime multimodal fusion for image-guided interventions using self-similarities. In K. Mori, I. Sakuma, Y. Sato, C. Barillot, & N. Navab (Eds.), Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) Vol. 8149 LNCS (pp. 187-194). Nagoya Univ, Nagoya, JAPAN: SPRINGER-VERLAG BERLIN.
    DOI Scopus69 WoS55 Europe PMC4
    2013 Bhushan, M., Schnabel, J., Chappell, M., Gleeson, F., Anderson, M., Franklin, J., . . . Jenkinson, M. (2013). The impact of heterogeneity and uncertainty on prediction of response to therapy using dynamic MRI data. In K. Mori, I. Sakuma, Y. Sato, C. Barillot, & N. Navab (Eds.), Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) Vol. 8149 LNCS (pp. 316-323). Nagoya Univ, Nagoya, JAPAN: SPRINGER-VERLAG BERLIN.
    DOI Scopus3 WoS2
    2012 Heinrich, M., Jenkinson, M., Brady, S., & Schnabel, J. (2012). Globally optimal deformable registration on a minimum spanning tree using dense displacement sampling. In N. Ayache, H. Delingette, P. Golland, & K. Mori (Eds.), Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) Vol. 7512 LNCS (pp. 115-122). Nice, FRANCE: SPRINGER-VERLAG BERLIN.
    DOI Scopus26 WoS17 Europe PMC1
    2012 Heinrich, M., Jenkinson, M., Brady, S., & Schnabel, J. (2012). Textural mutual information based on cluster trees for multimodal deformable registration. In Proceedings - International Symposium on Biomedical Imaging (pp. 1471-1474). Barcelona, SPAIN: IEEE.
    DOI Scopus6 WoS3
    2012 Gunn, R. N., Jenkinson, M., Rabinner, E. A., Behrens, T., Shotbolt, P., Long, C., . . . Tziortzi, A. C. (2012). Quantification of dopamine release within the connectivity-derived functional subdivision of striatum. In JOURNAL OF CEREBRAL BLOOD FLOW AND METABOLISM Vol. 32 (pp. S166). Baltimore, MD: NATURE PUBLISHING GROUP.
    2012 Matthews, L., Marasco, R., Jenkinson, M., Kuker, W., Leite, M., Giorgio, A., . . . Palace, J. (2012). Neuromyelitis optica spectrum disorder and multiple sclerosis can be distinguished on the basis of MRI brain lesion characteristics. In MULTIPLE SCLEROSIS JOURNAL Vol. 18 (pp. 9-10). Lyon, FRANCE: SAGE PUBLICATIONS LTD.
    2012 Fabes, J., Matthews, L., Fillipini, N., Talbot, K., Jenkinson, M., & Turner, M. R. (2012). Quantitative Analysis of FLAIR Images in ALS Has Diagnostic Potential. In ANNALS OF NEUROLOGY Vol. 72 (pp. S79). Boston, MA: WILEY-BLACKWELL.
    2011 Matthews, L., Kolind, S., Jenkinson, M., Leite, M., Johansen-Berg, H., & Palace, J. (2011). Distinction of aquaporin-4 antibody positive neuromyelitis optica from multiple sclerosis using diffusion tensor and myelin water imaging. In MULTIPLE SCLEROSIS JOURNAL Vol. 17 (pp. S165). SAGE PUBLICATIONS LTD.
    2011 Tziortzi, A., Searle, G., Long, C., Shotbolt, P., Rabiner, E., Jenkinson, M., & Gunn, R. (2011). A diffusion tensor imaging (DTI) and [11C]PHNO PET study to measure dopamine release in the functional subdivisions of the basal ganglia. In JOURNAL OF NUCLEAR MEDICINE Vol. 52 (pp. 2 pages). SOC NUCLEAR MEDICINE INC.
    2011 de Ruiter, M., Tomassini, V., Arun, T., Jbabdi, S., Matthews, L., Sbardella, E., . . . Palace, J. (2011). Acid-sensing ion channel 1 blockade preserves brain microstructural integrity in patients with multiple sclerosis. In MULTIPLE SCLEROSIS JOURNAL Vol. 17 (pp. S205). SAGE PUBLICATIONS LTD.
    2011 Bhushan, M., Schnabel, J., Risser, L., Heinrich, M., Brady, J., & Jenkinson, M. (2011). Motion correction and parameter estimation in dceMRI sequences: Application to colorectal cancer. In G. Fichtinger, A. Martel, & T. Peters (Eds.), Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) Vol. 6891 LNCS (pp. 476-483). Toronto, CANADA: SPRINGER-VERLAG BERLIN.
    DOI Scopus32 WoS29 Europe PMC3
    2011 Tziortzi, A., Searle, G., Tsoumpas, C., Long, C., Shotbolt, P., Rabiner, E., . . . Gunn, R. (2011). MR-DTI and PET multimodal imaging of dopamine release within subdivisions of basal ganglia. In Journal of Physics: Conference Series Vol. 317 (pp. 3 pages). CYPRUS: IOP PUBLISHING LTD.
    DOI Scopus2 WoS1
    2011 Heinrich, M., Jenkinson, M., Bhushan, M., Matin, T., Gleeson, F., Brady, J., & Schnabel, J. (2011). Non-local shape descriptor: A new similarity metric for deformable multi-modal registration. In G. Fichtinger, A. Martel, & T. Peters (Eds.), Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) Vol. 6892 LNCS (pp. 541-548). Toronto, CANADA: SPRINGER-VERLAG BERLIN.
    DOI Scopus17 WoS15
    2010 Bishopy, C., Jenkinson, M., Declerck, J., & Merhof, D. (2010). Evaluation of hippocampal segmentation methods for healthy and pathological subjects. In EG VCBM 2010 - Eurographics Workshop on Visual Computing for Biology and Medicine (pp. 17-24).
    DOI Scopus3
    2010 Arun, T., Smith, S., Weir, A., Palace, J., & Jenkinson, M. (2010). DIRECT COMPARISON OF MULTIPLE NONLESIONAL IMAGING MEASURES TO ASSESS THEIR POWER TO MEASURE TREATMENT EFFECTS OVER 1 YEAR IN PRIMARY PROGRESSIVE MULTIPLE SCLEROSIS. In JOURNAL OF NEUROLOGY NEUROSURGERY AND PSYCHIATRY Vol. 81 (pp. E52-E53). Bournemouth, ENGLAND: B M J PUBLISHING GROUP.
    DOI
    2010 Tarunya, A., Smith, S., Jenkinson, M., Palace, J., & Beckmann, C. (2010). PREDICTING BRAIN ATROPHY AT 1 YEAR BY BASELINE MULTIMODAL MRI DATA. In JOURNAL OF NEUROLOGY NEUROSURGERY AND PSYCHIATRY Vol. 81 (pp. E42). Bournemouth, ENGLAND: B M J PUBLISHING GROUP.
    DOI
    2010 Tziortzi, A. C., Douaud, G., Shotbolt, P., Bishop, C., Searle, G., Laruelle, M., . . . Gunn, R. N. (2010). A combined diffusion tensor imaging (DTI) and [11C]-(+)-PHNO positron emission tomography (PET) study to quantify dopamine D3/D2 receptors in pallidum. In NEUROIMAGE Vol. 52 (pp. S23). Glasgow, SCOTLAND: ACADEMIC PRESS INC ELSEVIER SCIENCE.
    DOI WoS6
    2009 Poynton, C., Jenkinson, M., & Wells, W. (2009). Atlas-based improved prediction of magnetic field inhomogeneity for distortion correction of EPI data. In G. Yang, D. Hawkes, D. Rueckert, A. Nobel, & C. Taylor (Eds.), Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) Vol. 5762 LNCS (pp. 951-959). Imperial Coll, London, ENGLAND: SPRINGER-VERLAG BERLIN.
    DOI Scopus6 WoS6 Europe PMC2
    2009 Petrović, A., Smith, S., Menke, R., & Jenkinson, M. (2009). Methods for tractography-driven surface registration of brain structures. In G. Yang, D. Hawkes, D. Rueckert, A. Nobel, & C. Taylor (Eds.), Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) Vol. 5761 LNCS (pp. 705-712). Imperial Coll, London, ENGLAND: SPRINGER-VERLAG BERLIN.
    DOI Scopus6 WoS4
    2008 Babalola, K., Patenaude, B., Aljabar, P., Schnabel, J., Kennedy, D., Crum, W., . . . Rueckert, D. (2008). Comparison and evaluation of segmentation techniques for subcortical structures in brain MRI. In D. Metaxas, L. Axel, G. Fichtinger, & G. Szekely (Eds.), Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) Vol. 5241 LNCS (pp. 409-416). New York, NY: SPRINGER-VERLAG BERLIN.
    DOI Scopus55 WoS44 Europe PMC6
    2008 Poynton, C., Jenkinson, M., Whalen, S., Golby, A., & Wells, W. (2008). Fieldmap-free retrospective registration and distortion correction for EPI-based functional imaging. In D. Metaxas, L. Axel, G. Fichtinger, & G. Szekely (Eds.), Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) Vol. 5242 LNCS (pp. 271-279). New York, NY: SPRINGER-VERLAG BERLIN.
    DOI Scopus5 WoS3
    2008 Glahn, D. C., Jenkinson, M., Monkul, E. S., Robinson, J. L., Bearden, C. E., Escamilla, M. A., . . . Patenaude, B. (2008). Amygdala enlargement and shape distortion in bipolar disorder. In BIOLOGICAL PSYCHIATRY Vol. 63 (pp. 232S-233S). Washington, DC: ELSEVIER SCIENCE INC.
    WoS1
    2007 Zöllei, L., Jenkinson, M., Timoner, S., & Wells, W. (2007). A marginalized MAP approach and EM optimization for pair-wise registration. In N. Karssemeijer, & B. Lelieveldt (Eds.), Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) Vol. 4584 LNCS (pp. 662-674). Kerkrade, NETHERLANDS: SPRINGER-VERLAG BERLIN.
    DOI Scopus10 WoS4 Europe PMC1
    2006 Patenaude, B., Smith, S., & Jenkinson, M. (2006). A Bayesian cost function applied to model-based registration of sub-cortical brain structures. In J. Pluim, B. Likar, & F. Gerritsen (Eds.), Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) Vol. 4057 LNCS (pp. 9-17). Utrecht Univ, Utrecht, NETHERLANDS: SPRINGER-VERLAG BERLIN.
    DOI
    2006 Babalola, K., Cootes, T., Patenaude, B., Rao, A., & Jenkinson, M. (2006). Comparing the similarity of statistical shape models using the bhattacharya metric. In R. Larsen, M. Nielsen, & J. Sporring (Eds.), Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) Vol. 4190 LNCS - I (pp. 142-150). Copenhagen, DENMARK: SPRINGER-VERLAG BERLIN.
    DOI Scopus6 WoS5
    2005 Crum, W., Camara, O., Rueckert, D., Bhatia, K., Jenkinson, M., & Hill, D. (2005). Generalised overlap measures for assessment of pairwise and groupwise image registration and segmentation. In J. Duncan, & G. Gerig (Eds.), Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) Vol. 3749 LNCS (pp. 99-106). Palm Springs, CA: SPRINGER-VERLAG BERLIN.
    DOI Scopus26 WoS24 Europe PMC6
    2004 Bannister, P., Brady, J., & Jenkinson, M. (2004). Non-rigid motion estimation and spatiooral realignment in FMRI. In IEEE Computer Society Conference on Computer Vision and Pattern Recognition Workshops Vol. 2004-January.
    DOI
    2004 Loftus, C., Jenkinson, M., & Egan, G. (2004). High resolution boundary element forward models for sensor arrays: An application to electroencephalography. In M. Palaniswami, B. Krishnamachari, & S. Challa (Eds.), Proceedings of the 2004 Intelligent Sensors, Sensor Networks and Information Processing Conference, ISSNIP '04 (pp. 599-604). Melbourne, AUSTRALIA: IEEE.
    2004 Smith, S., Jenkinson, M., Woolrich, M., Beckmann, C., Behrens, T., Johansen-Berg, H., . . . Matthews, P. (2004). Advances in functional and structural MR image analysis and implementation as FSL. In NeuroImage Vol. 23 (pp. S208-S219). Univ Calif Los Angeles, Inst Pure & Appl Math, Los Angeles, CA: ACADEMIC PRESS INC ELSEVIER SCIENCE.
    DOI Scopus6844 WoS6150 Europe PMC4853
    2004 Crum, W., Rueckert, D., Jenkinson, M., Kennedy, D., & Smith, S. (2004). A framework for detailed objective comparison of non-rigid registration algorithms in neuroimaging. In C. Barillot, D. Haynor, & P. Hellier (Eds.), Lecture Notes in Computer Science Vol. 3216 (pp. 679-686). St Malo, FRANCE: SPRINGER-VERLAG BERLIN.
    Scopus47 WoS26
    2003 Jenkinson, M., Wilson, J., & Jezzard, P. (2003). Modelling B0 induced artifacts in fMRI using perturbation calculations. In AUSTRALIAN JOURNAL OF PSYCHOLOGY Vol. 55 (pp. 21). AUSTRALIAN PSYCHOLOGICAL SOC.
    WoS1
    2003 Loftus, C., Jenkinson, M., Wright, M., Sergejew, A., & Egan, G. (2003). Recovering simulated EEG source time series using independent component analysis. In AUSTRALIAN JOURNAL OF PSYCHOLOGY Vol. 55 (pp. 23). AUSTRALIAN PSYCHOLOGICAL SOC.
    2002 Walters, N., Jenkinson, M., Kean, M., Watson, J., & Egan, G. (2002). Development of in vivo high resolution individual based neuroanatomical atlases using magnetic resonance imaging. In L. Wang, J. Rajapakse, K. Fukushima, S. Lee, & X. Yao (Eds.), ICONIP 2002 - Proceedings of the 9th International Conference on Neural Information Processing: Computational Intelligence for the E-Age Vol. 1 (pp. 193-196). SINGAPORE, SINGAPORE: NANYANG TECHNOLOGICAL UNIV.
    DOI Scopus1
    2001 Smith, S., Zhang, Y., Jenkinson, M., Matthews, P., & De Stefano, N. (2001). SIENA: Single and multiple time point brain atrophy analysis. In NEUROIMAGE Vol. 13 (pp. S250). ACADEMIC PRESS INC.
    2001 Jenkinson, M. (2001). Improved unwarping of EPI images using regularised B0 maps. In NEUROIMAGE Vol. 13 (pp. S165). ACADEMIC PRESS INC.
    WoS16
    2001 Hall, D., Goncalves, M., Smith, S., Jezzard, P., Jenkinson, M., & Haggard, M. (2001). Venous contribution to high magnitude BOLD contrast activation. In NEUROIMAGE Vol. 13 (pp. S143). ACADEMIC PRESS INC.
    2001 Bannister, P., & Jenkinson, M. (2001). Robust affine motion correction in fMRI time series. In NEUROIMAGE Vol. 13 (pp. S70). ACADEMIC PRESS INC.
    WoS6
    2001 Bannister, P., Beckmann, C., & Jenkinson, M. (2001). Exploratory motion analysis in fMRI using ICA. In NEUROIMAGE Vol. 13 (pp. S69). ACADEMIC PRESS INC.
    WoS2
    2001 Smith, S., Bannister, P., Beckmann, C., Brady, M., Clare, S., Flitney, D., . . . Zhang, Y. (2001). FSL: New tools for functional and structural brain image analysis. In NEUROIMAGE Vol. 13 (pp. S249). ACADEMIC PRESS INC.
    WoS17
    1999 Smith, S., & Jenkinson, M. (1999). Accurate robust symmetry estimation. In C. Taylor, & A. Colchester (Eds.), Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) Vol. 1679 (pp. 308-317). CAMBRIDGE, ENGLAND: SPRINGER-VERLAG BERLIN.
    Scopus23 WoS12
    1997 Jenkinson, M., & Brady, M. (1997). Feature saliency from noise variations in invariants. In Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) Vol. 1352 (pp. 41-48).
  • Conference Items

    Year Citation
    2019 Gentile, G., Battaglini, M., Luchetti, L., Giorgio, A., Griffanti, L., Sundaresan, V., . . . De Stefano, N. (2019). BIANCA for an automatic detection of multiple sclerosis lesions using machine learning. Poster session presented at the meeting of MULTIPLE SCLEROSIS JOURNAL. Stockholm, SWEDEN: SAGE PUBLICATIONS LTD.
    2019 Messina, S., Mariano, R., Roca-Fernandez, A., Cavey, A., Everett, R., Reeve, S., . . . Palace, J. (2019). Normal appearing white matter and lesional integrity in MOG-Ab disease and MS: a diffusion-weighted imaging study. Poster session presented at the meeting of MULTIPLE SCLEROSIS JOURNAL. Stockholm, SWEDEN: SAGE PUBLICATIONS LTD.
  • 2019        Wellcome Trust Collaborative Award (co-investigator) - Integrative imaging of brain structure and function in populations and individuals (total funds £3.8m)
  • 2017        Wellcome Trust Centre for Integrative Neuroimaging (co-investigator) - Wellcome Trust Centre Grant (total funds £11m)
  • 2013        Cancer Research UK - Oxford Cancer Imaging Centre (applicants in the Image Analysis Programme: Mike Brady, Michael Chappell, Vicente Grau, Mark Jenkinson, Peter Jezzard, and Julia Schnabel) (total funds of £16m across 6 Programmes)
  • 2012        Wellcome Trust Strategic Award (co-investigator) - Integrated multimodal brain imaging for neuroscience research and clinical practice (total funds £2m)
  • 2011        NERC Grant (co-investigator) - Constraining the response of the hydrological cycle, land surface and regional weather to global change (HYDRA) (total funds £121K)
  • 2010        NIH Grant (co-investigator) - Mapping the Human Connectome: Structure, Function and Heritability (total funds US$30m)
  • 2009        EPSRC Grant (co-applicant) - New Tools for Understanding White Matter Disease using Diffusion MRI (total funds £555K)
  • 2006        GlaxoSmithKline Grant (co-applicant) - Integrated structural and diffusion imaging for Alzheimer's (total funds £121K)
  • 2005        David Phillips Fellowship (principal investigator) from the UK BBSRC (total funds £395K)
  • 2005        DTI Grant (co-applicant) - Functional brain imaging: Relating patient data to the population (total funds £150K)
  • 2004        EPSRC Grant (co-applicant) - Integrated Brain Image Modelling (total funds £750K)
  • 2003        EPSRC Grant (co-author) - Information eXtraction from Images (total funds £555K)
  • 2002        GlaxoSmithKline Grant (co-author) - FMRI Group Statistics (total funds £190K)
  • International: FSL Courses
  • University of Oxford: MRI Graduate Programme
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  • Committee Memberships

    Date Role Committee Institution Country
    2015 - ongoing Member INCF Human Atlas Working Group INCF United States
    2005 - 2008 Member ISMRM Scientific Annual Meeting Program Committee ISMRM United States
    2004 - 2007 Member NIH Data Format Working Group (NIfTI) NIH United States
  • Position: Professor of Neuroimaging
  • Phone: 83131118
  • Email: mark.jenkinson@adelaide.edu.au
  • Campus: North Terrace
  • Building: Ingkarni Wardli, floor 5
  • Org Unit: Australian Institute for Machine Learning

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