Manijeh Mohammadi Dehcheshmeh
School of Animal and Veterinary Science
Faculty of Sciences
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Appointments
Date Position Institution name 2016 University Postdoctoral Fellow Level A (Step 8) University of Adelaide, Adelaide 2014 - 2014 Casual Data Analyst University of South Australia -
Education
Date Institution name Country Title 2008 - 2014 University of Adelaide, Adelaide Australia PhD
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Journals
Year Citation 2020 Butcher, R. G., Pettett, L. M., Fabijan, J., Ebrahimie, E., Mohammadi-Dehcheshmeh, M., Speight, K. N., . . . Trott, D. J. (2020). Periodontal disease in free-ranging koalas (Phascolarctos cinereus) from the Mount Lofty Ranges, South Australia, and its association with koala retrovirus infection.. Australian veterinary journal, 98(5), 200-206.
Scopus4 WoS4 Europe PMC12020 Kidsley, A. K., O'Dea, M., Ebrahimie, E., Mohammadi Dehcheshmeh, M., Saputra, S., Jordan, D., . . . Trott, D. J. (2020). Genomic analysis of fluoroquinolone-susceptible phylogenetic group B2 extraintestinal pathogenic Escherichia coli causing infections in cats. Veterinary Microbiology, 245(-), 108685-1-108685-7.
Scopus2 WoS4 Europe PMC12020 Rahmatizadeh, F., Pashaei-Asl, F., Mohammadi Dehcheshmeh, M., Rahbar, S., Laleataei, M., Aziz, S. G. G., . . . Pashaiasl, M. (2020). Reduction in the viability of human cervical cancer hela cell line via indirect co-culture with amniotic fluid-derived mesenchymal stem cells. International Journal of Women's Health and Reproduction Sciences, 8(3), 319-327.
2019 Tahmasebi, A., Ebrahimie, E., Pakniyat, H., Ebrahimi, M., & Mohammadi Dehcheshmeh, M. (2019). Tissue-specific transcriptional biomarkers in medicinal plants: Application of large-scale meta-analysis and computational systems biology. Gene, 691, 114-124.
Scopus4 WoS2 Europe PMC12019 Alanazi, I. O., Al Shehri, Z. S., Ebrahimie, E., Giahi, H., & Mohammadi-Dehcheshmeh, M. (2019). Non-coding and coding genomic variants distinguish prostate cancer, castration-resistant prostate cancer, familial prostate cancer, and metastatic castration-resistant prostate cancer from each other. Molecular Carcinogenesis, 58(6), 13 pages.
Scopus5 WoS6 Europe PMC32019 Tahmasebi, A., Ebrahimie, E., Pakniyat, H., Ebrahimi, M., & Mohammadi-Dehcheshmeh, M. (2019). Insights from the Echinacea purpurea (L.) Moench transcriptome: Global reprogramming of gene expression patterns towards activation of secondary metabolism pathways. Industrial Crops and Products, 132, 365-376.
Scopus3 WoS32019 Speight, K. N., Houston-Francis, M., Mohammadi Dehcheshmeh, M., Ebrahimie, E., Saputra, S., & Trott, D. J. (2019). Oxalate-degrading bacteria, including Oxalobacter formigenes, colonise the gastrointestinal tract of healthy koalas (Phascolarctos cinereus) and those with oxalate nephrosis. Australian Veterinary Journal, 97(5), 166-170.
Scopus2 WoS32019 Ebrahimi, M., Mohammadi-Dehcheshmeh, M., Ebrahimie, E., & Petrovski, K. (2019). Comprehensive analysis of machine learning models for prediction of sub-clinical mastitis: Deep Learning and Gradient-Boosted Trees outperform other models. Computers in Biology and Medicine, 114, 9 pages.
Scopus30 WoS22 Europe PMC42019 Rahbar, S., Pashaiasl, M., Ezzati, M., Ahmadi AsrBadr, Y., Mohammadi Dehcheshmeh, M., Mohammadi, S. A., & Ghaffari Novin, M. (2019). MicroRNA-based regulatory circuit involved in sperm infertility.. Andrologia, 52(1), e13453.
Scopus5 WoS4 Europe PMC12018 Alanazi, I., AlYahya, S., Ebrahimie, E., & Mohammadi-Dehcheshmeh, M. (2018). Computational systems biology analysis of biomarkers in lung cancer; unravelling genomic regions which frequently encode biomarkers, enriched pathways, and new candidates. Gene, 659, 29-36.
Scopus4 WoS5 Europe PMC42018 Mohammadi Dehcheshmeh, M., Niazi, A., Ebrahimi, M., Tahsili, M., Nurollah, Z., Ebrahimi Khaksefidi, R., . . . Ebrahimie, E. (2018). Unified Transcriptomic Signature of Arbuscular Mycorrhiza Colonization in Roots of Medicago truncatula by Integration of Machine Learning, Promoter Analysis, and Direct Merging Meta-Analysis. Frontiers in Plant Science, 9, 24 pages.
Scopus9 WoS9 Europe PMC52016 Kargarfard, F., Sami, A., Mohammadi-Dehcheshmeh, M., & Ebrahimie, E. (2016). Novel approach for identification of influenza virus host range and zoonotic transmissible sequences by determination of host-related associative positions in viral genome segments. BMC Genomics, 17(1), 925-1-925-10.
Scopus11 WoS12 Europe PMC92015 Tavizi, A., Javaran, M., Moieni, A., Mohammadi-Dehcheshmeh, M., Mohebodini, M., & Ebrahimie, E. (2015). Root and shoot parts of strawberry: factories for production of functional human pro-insulin. Molecular Biology Reports, 42(5), 1013-1023.
Scopus2 WoS32014 Chiasson, D., Loughlin, P., Mazurkiewicz, D., Mohammadidehcheshmeh, M., Fedorova, E., Okamoto, M., . . . Kaiser, B. (2014). Soybean SAT1 (Symbiotic Ammonium Transporter 1) encodes a bHLH transcription factor involved in nodule growth and NH₄⁺ transport. Proceedings of the National Academy of Sciences of the United States of America, 111(13), 4814-4819.
Scopus44 WoS46 Europe PMC302014 Zinati, Z., Zamansani, F., Hossein KayvanJoo, A., Ebrahimi, M., Ebrahimi, M., Ebrahimie, E., & Mohammadi Dehcheshmeh, M. (2014). New layers in understanding and predicting α-linolenic acid content in plants using amino acid characteristics of omega-3 fatty acid desaturase. Computers in Biology and Medicine, 54, 14-23.
Scopus11 WoS9 Europe PMC62014 Mohammadi Dehcheshmeh, M., Ebrahimie, E., Tyerman, S., & Kaiser, B. (2014). A novel method based on combination of semi-in vitro and in vivo conditions in Agrobacterium rhizogenes-mediated hairy root transformation of Glycine species. In Vitro Cellular & Developmental Biology-plant, 50(2), 282-291.
Scopus8 WoS82012 Tahmasebi, A., Aram, F., Ebrahimi, M., Mohammadi Dehcheshmeh, M., & Ebrahimie, E. (2012). Genome-wide analysis of cytosolic and chloroplastic isoforms of glutathione reductase in plant cells. Plant Omics, 5(2), 94-102.
Scopus10 WoS92011 Tahrokh, E., Ebrahimi, M., Zamansani, F., Ebrahimi, M., Sarvestani, N., Mohammadi Dehcheshmeh, M., . . . Ebrahimie, E. (2011). Comparative study of ammonium transporters in different organisms by study of a large number of structural protein features via data mining algorithms. Genes and Genomics, 33(5), 565-575.
Scopus10 WoS102010 Ebrahimie, E., Mohammadi-Dehcheshmeh, M., Ebrahimi, M., & Ebrahimi, M. (2010). A study on functional modulations of genome in somatic embryogenesis pathway using EST analysis. NEW BIOTECHNOLOGY, 27, S43.
WoS22008 Mohammadi-Dehcheshmeh, M., Khalighi, A., Naderi, R., Sardari, M., & Ebrahimie, E. (2008). Petal: a reliable explant for direct bulblet regeneration of endangered wild populations of Fritillaria imperialis L.. Acta Physiologiae Plantarum, 30(3), 395-399.
Scopus17 WoS132007 Ebrahimie, E., Naghavi, M. R., Hosseinzadeh, A., Behamta, M. R., Mohammadi-Dehcheshmeh, M., Sarrafi, A., & Spangenberg, G. (2007). Induction and comparison of different in vitro morphogenesis pathways using embryo of cumin (Cuminum cyminum L.) as a model material. Plant Cell, Tissue and Organ Culture, 90(3), 293-311.
Scopus13 WoS122007 Ebrahimie, E., Hosseinzadeh, A., Nagavi, M. R., Ghannadha, M. R., & Mohammadie-Dehcheshmeh, M. (2007). Combined direct regeneration protocols in tissue culture of different cumin genotypes based on pre-existing meristems. Pakistan Journal of Biological Sciences, 10(9), 1360-1370.
2007 Mohammadi-Dehcheshmeh, M., Khalighi, A., Naderi, R., Ebrahimie, E., & Sardari, M. (2007). Indirect somatic embryogenesis from petal explant of endangered wild population of Fritillaria imperialis. Pakistan Journal of Biological Sciences, 10(11), 1875-1879.
Scopus112006 Ebrahimie, E., Habashy, A. A., Mohammadie-Dehcheshmeh, M., Ghannadha, M. R., Ghareyazie, B., & Yazdi-Amadi, B. (2006). Direct shoot regeneration from mature embryo as a rapid and genotype-independent pathway in tissue culture of heterogeneous diverse sets of cumin (Cuminum cyminum L.) genotypes. In Vitro Cellular and Developmental Biology - Plant, 42(5), 455-460.
Scopus20 WoS212003 Ebrahimie, E., Habashi, A. A., Ghareyazie, B., Ghannadha, M., & Mohammadie, M. (2003). A rapid and efficient method for regeneration of plantlets from embryo explants of cumin (Cuminum cyminum). Plant Cell, Tissue and Organ Culture, 75(1), 19-25.
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Conference Papers
Year Citation 2009 Ebrahimi, M., Ebrahimie, E., Ebrahimi, M., Deihimi, T., Delavari, A., & Mohammadi-Dehcheshmeh, M. (2009). Application of neural networks methods to define the most important features contributing to xylanase enzyme thermostability. In IEEE Congress on Evolutionary Computation, 2009. CEC '09 (pp. 2885-2891). USA: IEEE.
Scopus5 WoS12006 Mohammadi-Dehcheshmeh, M., Khalighi, A., Ebrahimie, E., Sardari, M., & Naderi, R. (2006). Direct bulblet regeneration from mature embryo: A rapid, efficient and genotype-independent in vitro morphogenesis pathway for preservation of endangered wild populations of Fritillaria imperialis and Fritillaria persica. In HORTSCIENCE Vol. 41 (pp. 1066). AMER SOC HORTICULTURAL SCIENCE.
WoS32006 Ebrahimie, E., Mohammadi-Dehcheshmeh, M., & Sardari, M. (2006). Fritillaria species are at risk of extinction in Iran: Study on effective factors and necessity of international attention. In HORTSCIENCE Vol. 41 (pp. 1002). AMER SOC HORTICULTURAL SCIENCE.
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