Julian Carosi

Mr Julian Carosi

School of Biological Sciences

College of Science

Eligible to supervise Masters and PhD as Principal Supervisor - email supervisor to discuss availability.


Autophagy is the body’s way of removing damaged waste – or junk – from cells to keep them healthy. It is a ‘waste-disposal’ pathway which eats damaged or unnecessary components that would otherwise accumulate inside cells.

During autophagy, an autophagosome captures and engulfs cellular junk and brings it to the lysosome where powerful enzymes break it down so that its building blocks can be recycled or used as fuel. Special “eat me” signals on damaged – but not healthy – cellular components earmark them for degradation by autophagy. Autophagy therefore serves important housekeeping and nutrient scavenging functions, and is activated in response to organelle damage, infection, and nutrient scarcity. 

 

Image from Vargas, 2023, Nat Rev Mol Cell Biol. PMID: 36302887

 

Autophagy plays important physiological roles such as adaptation to starvation, innate immunity, fetal development, and maintaining tissue health. When autophagy is disrupted, it can contribute to neurodegenerative diseases (e.g., Alzheimer’s and Parkinson’s disease), certain types of cancer (e.g., pancreatic), and accelerated ageing. As a result, there is increasing interest in developing drugs or interventions that target the autophagy pathway for health benefits.

 

My research focuses on:

  • understanding nutrient-sensing upstream of autophagy
  • understanding how types of damage serve as ‘eat me’ signals
  • understanding how selective autophagy facilitates cell-state transitions (e.g., senescence)
  • understanding how autophagy differs across tissues during ageing and in response to dietary changes
  • developing tools for human autophagy measurement (e.g., blood test, biomarkers & PET imaging)

Hear more about my research:

Remote video URL

Interested in autophagy research?

I’m always looking for enthusiastic and talented students (PhD, Honours, or undergraduate) to advance our research. If you’re interested in learning more, feel free to reach out to me by email.

Year Citation
2026 Umargamwala, R., Manning, J., Carosi, J. M., Denton, D., & Kumar, S. (2026). Ubiquitin ligase RCHY1 regulates autophagosome-lysosome fusion. Cell Death Discovery, 12(1), 150106-1-150106-10.
DOI
2025 Singh, S., Carosi, J. M., Dang, L., & Sargeant, T. J. (2025). Autophagy does not always decline with ageing. Nature Cell Biology, 27(5), 712-715.
DOI Scopus5 WoS5 Europe PMC4
2025 Carosi, J. M., Martin, A., Hein, L. K., Hassiotis, S., Hattersley, K. J., Turner, B. J., . . . Sargeant, T. J. (2025). Autophagy across tissues of aging mice. PLoS ONE, 20(6), e0325505-1-e0325505-17.
DOI Scopus5 WoS4 Europe PMC6
2025 Dang, L. V. P., Martin, A., Carosi, J. M., Gore, J., Singh, S., & Sargeant, T. J. (2025). Cell-Type-Specific Autophagy in Human Leukocytes. The FASEB Journal, 39(12), e70708-1-e70708-13.
DOI Scopus5 WoS4 Europe PMC5
2024 Carosi, J. M., Hein, L. K., Sandow, J. J., Dang, L. V. P., Hattersley, K., Denton, D., . . . Sargeant, T. J. (2024). Autophagy captures the retromer-TBC1D5 complex to inhibit receptor recycling. Autophagy, 20(4), 863-882.
DOI Scopus9 WoS9 Europe PMC13
2023 Carosi, J. M., & Sargeant, T. J. (2023). Rapamycin and Alzheimer disease: a hypothesis for the effective use of rapamycin for treatment of neurodegenerative disease.. Autophagy, 19(8), 1-5.
DOI Scopus35 WoS33 Europe PMC35
2023 Carosi, J. M., Denton, D., Kumar, S., & Sargeant, T. J. (2023). Receptor Recycling by Retromer. Molecular and Cellular Biology, 43(7), 317-334.
DOI Scopus26 WoS25 Europe PMC25
2022 Carosi, J. M., Fourrier, C., Bensalem, J., & Sargeant, T. J. (2022). The mTOR–lysosome axis at the centre of ageing. FEBS Open Bio, 12(4), 739-757.
DOI Scopus55 WoS52 Europe PMC54
2021 Carosi, J. M., Hein, L. K., van den Hurk, M., Adams, R., Milky, B., Singh, S., . . . Sargeant, T. J. (2021). Retromer regulates the lysosomal clearance of MAPT/tau. Autophagy, 17(9), 2217-2237.
DOI Scopus30 WoS34 Europe PMC38
2021 Carosi, J. M., Denton, D., Kumar, S., & Sargeant, T. J. (2021). Retromer dysfunction at the nexus of tauopathies. Cell Death and Differentiation, 28(3), 884-889.
DOI Scopus16 WoS14 Europe PMC18
2021 Klionsky, D. J., Abdel Aziz, A. K., Abdelfatah, S., Abdellatif, M., Kumar, S., & Tong, C. K. (2021). Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition). Autophagy, 17(1), 1-382.
DOI Scopus2398 WoS2036 Europe PMC2271
2021 Hattersley, K. J., Carosi, J. M., Hein, L. K., Bensalem, J., & Sargeant, T. J. (2021). PICALM regulates cathepsin D processing and lysosomal function.. Biochemical and biophysical research communications, 570, 103-109.
DOI Scopus10 WoS9 Europe PMC11
2021 Carosi, J. M., Nguyen, T. N., Lazarou, M., Kumar, S., & Sargeant, T. J. (2021). ATG8ylation of proteins: a way to cope with cell stress?. The Journal of Cell Biology, 220(11), 1-4.
DOI Scopus19 WoS18 Europe PMC26
2020 Bensalem, J., Hattersley, K. J., Hein, L. K., Tong Teong, X., Carosi, J. M., Hassiotis, S., . . . Sargeant, T. J. (2020). Measurement of autophagic flux in humans: an optimized method for blood samples.. Autophagy, 17(10), 3238-3255.
DOI Scopus54 WoS56 Europe PMC61
2019 Cui, Y., Carosi, J. M., Yang, Z., Ariotti, N., Kerr, M. C., Parton, R. G., . . . Teasdale, R. D. (2019). Retromer has a selective function in cargo sorting via endosome transport carriers. Journal of Cell Biology, 218(2), 615-631.
DOI Scopus120 WoS114 Europe PMC129
2019 Carosi, J. M., & Sargeant, T. J. (2019). Rapamycin and Alzheimer disease: a double-edged sword?. Autophagy, 15(8), 1460-1462.
DOI Scopus96 WoS91 Europe PMC85
2019 Carosi, J. M., Hattersley, K. J., Cui, Y., Yang, Z., Teasdale, R. D., & Sargeant, T. J. (2019). Subcellular Fractionation of Hela Cells for Lysosome Enrichment Using a Continuous Percoll-Density Gradient. Bio Protocol, 9(18), 9 pages.
DOI Scopus10 WoS10 Europe PMC11
2018 Hassiotis, S., Manavis, J., Blumbergs, P. C., Hattersley, K. J., Carosi, J. M., Kamei, M., & Sargeant, T. J. (2018). Lysosomal LAMP1 immunoreactivity exists in both diffuse and neuritic amyloid plaques in the human hippocampus. European Journal of Neuroscience, 47(9), 1043-1053.
DOI Scopus39 WoS37 Europe PMC36

Year Citation
2025 Tousian, H., Protzman, R. A., Sargeant, T. J., & Carosi, J. M. (2025). SenLect: a genetically encoded system to purify senescent cells.
DOI
2024 Carosi, J., Martin, A., Hein, L., Hassiotis, S., Hattersley, K., Turner, B., . . . Sargeant, T. (2024). Autophagy across tissues of aging mice.
DOI
2024 Dang, L. V. P., Martin, A., Carosi, J., Gore, J., Singh, S., & Sargeant, T. (2024). Cell-type specific autophagy in human leukocytes.
DOI

2024-26: Ideas Grant, NHMRC

“Imaging lysosomal function in the brain” 

Value: AUD $1,187,854

Position: CIC

2023-25: THRF EMCR Fellowship, The Hospital Research Foundation Group

“How do nutrients regulate autophagy and ageing?” 

Value: AUD $390,000

Position: CIA

2022-24: Ideas Grant, NHMRC

“Measuring healthy ageing: finding an autophagy biomarker for a scalable clinical test” 

Value: AUD $818,964

Position: CIB

2019: Research Degree Excellence Grant, University of South Australia

Value: AUD $10,000

Position: CIA

2017-20: Research Training Stipend, Australian Government 

Value: AUD $94,500

Position: CIA

2017-20: Commonwealth Scholarship, Australian Government 

Value: AUD $17,000

Position: CIA

2017: Asia-Pacific Alumni Professional Development Grant, Golden Key International Honour Society 

Value: AUD $1,000

Position: CIA

Date Role Research Topic Program Degree Type Student Load Student Name
2025 Co-Supervisor Creating a system to profile the molecular landscape of selective autophagy Doctor of Philosophy Doctorate Full Time Miss Sona Gopinathan
2024 Co-Supervisor Regulation of autophagy in cell and tissue homeostasis Doctor of Philosophy Doctorate Full Time Ruchi Umargamwala
2023 Co-Supervisor Lysosomal function in cellular senescence Doctor of Philosophy Doctorate Full Time Dr Hourieh Tousianshandiz

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