Dr John Maclean
Lecturer
School of Mathematical Sciences
College of Science
Eligible to supervise Masters and PhD - email supervisor to discuss availability.
I am a Lecturer in Data Science and Statistics, with chief interests in Data Assimilation and numerical multiscale methods. For access to preprints, please follow the arXiv link below `External Profiles', at the bottom of the page.
Prospective students are encouraged to contact me directly, but may find some inspiration in the following:
Data Assimilation (DA) - the mathematical and statistical question of how to combine an uncertain model forecast with data. I am interested in:
- Coherent structure DA, that is, employing low-dimensional structures in the DA update in place of the original data. Research questions here may tend towards statistics (how do measurement errors in data create measurement errors in coherent structures?) or applied maths (from the oceanographic/atmospheric sciences literature; how should we employ coherent structures, and on what scales?).
- Projected DA, that is, employing projections to split one DA problem into several. The advantage is that one can use a DA method with high accuracy on key parts of the DA problem, and use a DA method suited to high-dimensional inference on the remainder of the DA problem. Some overlap with coherent structures; the key in projected DA is translating dynamical information to statistical information.
- Non-Gaussian problems; DA algorithms are often founded on the assumption that measurement errors are distributed normally. However there are counter-examples, and work has shown that DA methods constructed for non-Gaussian measurement errors are promising. (This would be a new research area for me - based on work by Craig Bishop.)
- Surrogate DA, the design of DA methods where a statistical surrogate is trained to empower a large ensemble of forecasts to be approximated from a small number of computationally intensive runs of the physical model. Many open questions - see my preprint with A/Prof. Elaine Spiller.
Numerical Multiscale Methods - key focus is on Projective Integration, that accelerates simulation of stiff systems, and patch dynamics, that accelerates simulation of systems with fine and coarse spatial components.
- Projective Integration for stochastic systems; there is a wealth of literature on this topic, but to my view two questions remain. First is how to implement an accurate, fast PI solver for stochastic systems with unknown slow and fast variables. Second is how to modify such methods to nonstandard slow-fast systems of the sort discussed in http://dx.doi.org/10.1137/19M1242677
- Patch dynamics; recent work has developed an adaptive moving patch scheme. The scheme can simulate moving fine-scale meshes that come together to form shocks at unknown locations in the spatial domain. A project here might focus on extending and applying the moving patch dynamics to travelling wave problems.
Thanks for coming this far! Please accept a beautiful picture of adaptive moving patches simulating a problem with heterogeneous advection and diffusion terms; the inset shows details of the little black box.

| Date | Position | Institution name |
|---|---|---|
| 2021 - ongoing | Lecturer | University of Adelaide |
| 2018 - 2021 | Postdoc | University of Adelaide |
| 2015 - 2018 | Postdoc | Univerity of North Carolina at Chapel Hill |
| Date | Institution name | Country | Title |
|---|---|---|---|
| 2011 - 2014 | University of Sydney | Australia | PhD |
| Year | Citation |
|---|---|
| 2025 | Xiourouppa, A. H., Mikhin, D., Humphries, M., & Maclean, J. (2025). Theoretical Insights for Bearings-Only Tracking in Log-Polar Coordinates. IEEE Transactions on Aerospace and Electronic Systems, 61(4), 1-12. Scopus1 WoS1 |
| 2025 | Blake, L., Maclean, J., & Balasuriya, S. (2025). Rigorous convergence bounds for stochastic differential equations with application to uncertainty quantification. Physica D: Nonlinear Phenomena, 481, 134742-1-134742-19. |
| 2025 | Shorten, D. P., Humphries, M., Maclean, J., Yang, Y., & Roughan, M. (2025). Optimal proposal particle filters for detecting anomalies and manoeuvres from two line element data. Acta Astronautica, 228, 709-723. WoS1 |
| 2024 | Morris, D., Maclean, J., & Black, A. J. (2024). Computation of random time-shift distributions for stochastic population models.. Journal of mathematical biology, 89(3), 33. |
| 2024 | Loch, A., Sexton, S., Maclean, J., O’Connor, P., Adamson, D., & Scholz, G. (2024). Increased monetary equity and health wellbeing benefits for marginal urban socioeconomic groups from access to green space. Urban Forestry and Urban Greening, 102, 128576-1-128576-10. Scopus5 WoS5 |
| 2024 | Maclean, J., & Van Vleck, E. S. (2024). DECOMPOSITION OF LIKELIHOODS AND TECHNIQUES FOR MULTI-SCALE DATA ASSIMILATION. DISCRETE AND CONTINUOUS DYNAMICAL SYSTEMS-SERIES B, 0(0), 24 pages. |
| 2024 | Shermon, S., Maclean, J., Shim, R., & Kim, C. H. (2024). Neuropsychiatric Side Effects After Lumbosacral Epidural Steroid Injections: A Prospective Cohort Study. PAIN PHYSICIAN, 27(3), 12 pages. |
| 2024 | Maclean, J., Remick, S., Shim, W. J., Chakravorty, A., & Kim, C. (2024). Electronic Cigarette (E-Cig) Use in the Chronic Pain Population. PAIN PHYSICIAN, 27(2), 6 pages. |
| 2024 | O’loughlin, L., Maclean, J., & Black, A. (2024). Neural Likelihood Approximation for Integer Valued Time Series Data. Transactions on Machine Learning Research, 2024. |
| 2023 | Robbins, C., Blyth, M. G., MacLean, J., & Binder, B. J. (2023). A method to calculate inverse solutions for steady open channel free-surface flow. Journal of Fluid Mechanics, 977, 22 pages. Scopus2 WoS2 |
| 2023 | O'Loughlin, L., Maclean, J., & Black, A. (2023). Neural Likelihood Approximation for Integer Valued Time Series Data. |
| 2023 | Shorten, D. P., Yang, Y., Maclean, J., & Roughan, M. (2023). Wide-Scale Monitoring of Satellite Lifetimes: Pitfalls and a Benchmark Dataset. Journal of Spacecraft and Rockets, 60(6), 1-5. Scopus5 |
| 2022 | Albarakati, A., Budišić, M., Crocker, R., Glass-Klaiber, J., Iams, S., Maclean, J., . . . Van Vleck, E. S. (2022). Model and data reduction for data assimilation: Particle filters employing projected forecasts and data with application to a shallow water model. Computers and Mathematics with Applications, 116, 194-211. Scopus16 WoS13 |
| 2022 | Maclean, J., Bunder, J. E., Kevrekidis, I. G., & Roberts, A. J. (2022). Adaptively Detect and Accurately Resolve Macro-scale Shocks in an Efficient Equation-Free Multiscale Simulation. SIAM Journal on Scientific Computing, 44(4), A2557-A2581. Scopus2 WoS2 |
| 2022 | Johnson, S., Maclean, J., Vozzo, R. F., Koerber, A., & Humphries, M. A. (2022). Don't throw the student out with the bathwater: online assessment strategies your class won't hate. International Journal of Mathematical Education in Science and Technology, 53(3), 1-12. Scopus3 WoS2 |
| 2021 | Maclean, J., & Spiller, E. T. (2021). A surrogate-based approach to nonlinear, non-Gaussian joint state-parameter data assimilation. Foundations of Data Science, 3(3), 589-614. |
| 2021 | Maclean, J., Bunder, J. E., Kevrekidis, I. G., & Roberts, A. J. (2021). An Equation Free algorithm accurately simulates macroscale shocks arising from heterogeneous microscale systems. IEEE Journal on Multiscale and Multiphysics Computational Techniques, 6, 8-15. Scopus3 WoS3 |
| 2021 | Maclean, J., & Van Vleck, E. S. (2021). Particle filters for data assimilation based on reduced-order data models. Quarterly Journal of the Royal Meteorological Society, 147(736), 1892-1907. Scopus9 WoS9 |
| 2021 | Maclean, J., Bunder, J. E., & Roberts, A. J. (2021). A toolbox of equation-free functions in Matlab/Octave for efficient system level simulation. Numerical Algorithms, 87(4), 1729-1748. Scopus9 WoS7 |
| 2020 | Maclean, J., Bunder, J. E., Roberts, A. J., & Kevrekidis, I. G. (2020). A multiscale scheme accurately simulates macroscale shocks in an equation-free framework. |
| 2020 | Zhang, H., Lapointe, B. T., Anthony, N., Azevedo, R., Cals, J., Correll, C. C., . . . Barr, K. (2020). Discovery of <i>N</i>-(Indazol-3-yl)piperidine-4-carboxylic Acids as RORγt Allosteric Inhibitors for Autoimmune Diseases. ACS MEDICINAL CHEMISTRY LETTERS, 11(2), 114-119. WoS20 |
| 2017 | Maclean, J., Santitissadeekorn, N., & Jones, C. K. (2017). A coherent structure approach for parameter estimation in Lagrangian Data Assimilation. Physica D: Nonlinear Phenomena, 360, 36-45. Scopus13 WoS12 |
| 2015 | Maclean, J., & Gottwald, G. (2015). On convergence of higher order schemes for the projective integration method for stiff ordinary differential equations. Journal of Computational and Applied Mathematics, 288, 44-69. Scopus7 WoS7 |
| 2015 | Maclean, J. (2015). A note on implementations of the Boosting Algorithm and Heterogeneous Multiscale Methods. SIAM Journal on Numerical Analysis, 53(5), 2472-2487. Scopus2 WoS2 |
| 2015 | Bethapudi, S., Ritchie, D., Bongale, S., Gordon, J., MacLean, J., & Mendl, L. (2015). Data analysis and review of radiology services at Glasgow 2014 Commonwealth Games. SKELETAL RADIOLOGY, 44(10), 1477-1483. WoS8 |
| 2014 | Maclean, J., & Gottwald, G. (2014). On convergence of the projective integration method for stiff ordinary differential equations. Communications in Mathematical Sciences, 12(2), 235-255. Scopus4 WoS4 |
| Year | Citation |
|---|---|
| 2023 | Johnson, S., Maclean, J., Vozzo, R. F., Koerber, A., & Humphries, M. A. (2023). Don't throw the student out with the bathwater: online assessment strategies your class won't hate. In Takeaways from Teaching through a Pandemic (pp. 69-80). Routledge. DOI |
| 2019 | Budhiraja, A., Friedlander, E., Guider, C., Jones, C. K., & Maclean, J. (2019). Assimilating Data into Models. In A. E. Gelfand, M. Fuentes, J. A. Hoeting, & R. L. Smith (Eds.), Handbook of Environmental and Ecological Statistics (1 ed., pp. 687-708). Florida; USA: CRC Press. |
| Year | Citation |
|---|---|
| 2022 | Piyevsky, B., Maclean, J., Li, A., Rhodes, S., Prunty, M., Jesse, E., . . . Callegari, M. (2022). IMPACT AND IMPLICATIONS OF THE COVID-19 PANDEMIC ON UROLOGIC TRAINING. In JOURNAL OF UROLOGY Vol. 207 (pp. E513-E514). LIPPINCOTT WILLIAMS & WILKINS. |
| 2017 | Pesnot, T., Mahale, S., MacFaul, P., Maclean, J., Phillips, C., Bingham, M., . . . Armer, R. (2017). Development of 2" generation indoleamine 2,3-dioxygenase 1 (IDO1) selective inhibitors. In CANCER RESEARCH Vol. 77 (pp. 2 pages). DC, Washington: AMER ASSOC CANCER RESEARCH. DOI |
| 2015 | Khudoley, A., Chamberlain, K., Ershova, V., Sears, J., Prokopiev, A., MacLean, J., . . . Chipley, D. (2015). Proterozoic supercontinental restorations: Constraints from provenance studies of Mesoproterozoic to Cambrian clastic rocks, eastern Siberian Craton. In PRECAMBRIAN RESEARCH Vol. 259 (pp. 78-94). RUSSIA, Moscow: ELSEVIER. DOI WoS77 |
| 1984 | MACLEAN, J., & BECKER, R. (1984). THE IMPACT OF THE INTRODUCTION OF GERIATRIC ASSESSMENT BEDS INTO A LONG-TERM CARE UNIT. In GERONTOLOGIST Vol. 24 (pp. 121). GERONTOLOGICAL SOCIETY AMER. |
| Year | Citation |
|---|---|
| 2022 | Loch, A., Sexton, S., Scholz, G., Maclean, J., & O'Connor, P. (2022). Willingness to Pay and Avoided Health Costs associated with Metropolitan Parks. Adelaide, SA: South Australian Department for Environment and Water. |
| Year | Citation |
|---|---|
| 2024 | Blake, L., Maclean, J., & Balasuriya, S. (2024). Unifying Lyapunov exponents with probabilistic uncertainty quantification. |
| 2024 | Xiourouppa, A. H., Mikhin, D., Humphries, M., & Maclean, J. (2024). An insightful approach to bearings-only tracking in log-polar coordinates. |
| 2023 | Shorten, D. P., Maclean, J., Humphries, M., Yang, Y., & Roughan, M. (2023). Optimal Proposal Particle Filters for Detecting Anomalies and Manoeuvres from Two Line Element Data. |
| 2023 | Blake, L., Maclean, J., & Balasuriya, S. (2023). The convergence of stochastic differential equations to their linearisation in small noise limits. |
| Date | Role | Research Topic | Program | Degree Type | Student Load | Student Name |
|---|---|---|---|---|---|---|
| 2025 | Co-Supervisor | Predicting bottom topography underneath free-surface flow | Master of Philosophy | Master | Full Time | Miss Caitlin Lydia Anchor |
| 2025 | Co-Supervisor | Methods for inference and forecasting in mechanistic models with unresolved processes | Doctor of Philosophy | Doctorate | Full Time | Mr Liam Andrew Alex Blake |
| 2025 | Co-Supervisor | A Stochastic Framework for Quantifying and Reducing Uncertainty in Crop Model Predictions through Bayesian Inference and Model Error Diagnosis | Doctor of Philosophy | Doctorate | Full Time | Mr Haochi Wang |
| 2024 | Principal Supervisor | Scalable algorithms for non-linear target tracking | Doctor of Philosophy | Doctorate | Full Time | Miss Athena Helena Xiourouppa |
| 2023 | Co-Supervisor | Predicting Clinical Need During Dispatch to Guide Ambulance Response | Doctor of Philosophy | Doctorate | Part Time | Mr Trevor Paul Matthews |
| 2021 | Co-Supervisor | Modelling and Quantification of Food Deserts | Doctor of Philosophy under a Jointly-awarded Degree Agreement with | Doctorate | Part Time | Miss Tayla Paige Broadbridge |
| Date | Role | Research Topic | Program | Degree Type | Student Load | Student Name |
|---|---|---|---|---|---|---|
| 2023 - 2025 | Co-Supervisor | Geolocation with Latent Variable Models | Master of Philosophy | Master | Full Time | Miss Vivienne Mei-Larn Niejalke |
| 2022 - 2024 | Co-Supervisor | Computable Characterisations of Uncertainty in Differential Equations | Master of Philosophy | Master | Full Time | Mr Liam Andrew Alex Blake |
| 2022 - 2024 | Co-Supervisor | An Analysis of Bias in Australian Television Media | Master of Philosophy | Master | Full Time | Miss Irulan Claire Prowse Murphy |
| 2022 - 2023 | Co-Supervisor | Likelihood-Free Inference for Discrete Time Series Data Using Machine Learning | Master of Philosophy | Master | Full Time | Mr Luke Phillip O'Loughlin |
| 2021 - 2023 | Co-Supervisor | A Modelling Framework for Estimating the Risk of Importation of a Novel Disease | Master of Philosophy | Master | Full Time | Mr Antonio Max Parrella |
| 2019 - 2021 | Co-Supervisor | Lagrangian Coherent Data Assimilation for Chaotic Geophysical Systems | Master of Philosophy | Master | Full Time | Ms Rose Joy Crocker |
| Date | Title | Engagement Type | Institution | Country |
|---|---|---|---|---|
| 2021 - 2021 | Colloquium Organiser | Scientific Community Engagement | University of Adelaide | - |
| 2021 - ongoing | Outreach Committee | Scientific Community Engagement | University of Adelaide | - |