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Li, X., Liu, L., Li, J., & Le, T. D. (2025). Stable Breast Cancer Prognosis. IEEE Transactions on Computational Biology and Bioinformatics, 22(2), 721-731. DOI |
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Helal, S., Li, J., Liu, L., Ebrahimie, E., Dawson, S., Murray, D., & Long, Q. (2018). Predicting academic performance by considering student heterogeneity. Knowledge-Based Systems, 161, 134-146. DOI Scopus164 WoS111 |
| 2018 |
Helal, S., Li, J., Liu, L., Ebrahimie, E., Dawson, S., & Murray, D. J. (2018). Identifying key factors of student academic performance by subgroup discovery. International Journal of Data Science and Analytics, 7(3), 227-245. DOI Scopus39 WoS29 |
| 2018 |
Thuyen, T., Suriyanarayanan, T., Zeng, G., Le, T. D., Liu, L., Li, J., . . . Seneviratne, C. J. (2018). Use of haploid model of Candida albicans to uncover mechanism of action of a novel antifungal agent. Frontiers In cellular and infection microbiology, 8(164), 1-14. DOI Scopus15 WoS14 Europe PMC12 |
| 2018 |
Hoang, T., Liu, J., Pratt, N., Zheng, V. W., Chang, K. C., Roughead, E., & Li, J. (2018). Authenticity and credibility aware detection of adverse drug events from social media. International journal of medical informatics, 120, 157-171. DOI Scopus5 WoS4 Europe PMC6 |
| 2018 |
Xu, T., Su, N., Liu, L., Zhang, J., Wang, H., Zhang, W., . . . Le, T. D. (2018). miRBaseConverter: an R/Bioconductor package for converting and retrieving miRNA name, accession, sequence and family information in different versions of miRBase. BMC Bioinformatics, 19(514), 1-10. DOI Scopus60 WoS53 Europe PMC64 |
| 2018 |
Reynolds, C., Agrawal, M., Lee, I., Zhan, C., Li, J., Taylor, P., . . . Roos, G. (2018). A sub-national economic complexity analysis of Australia's states and territories. Regional studies, 52(5), 715-726. DOI Scopus44 WoS38 |
| 2018 |
Zhang, J., Liu, L., Li, J., & Le, T. D. (2018). LncmiRSRN: identification and analysis of long non-coding RNA related miRNA sponge regulatory network in human cancer. Bioinformatics (Oxford, England), 34(24), 4232-4240. DOI Scopus60 WoS55 Europe PMC53 |
| 2018 |
Le, T., Hoang, T., Li, J., Liu, L., Liu, H., & Hu, S. (2018). A fast PC algorithm for high dimensional causal discovery with multi-core PCs. IEEE/ACM Transactions on Computational Biology and Bioinformatics, 16(5), 1483-1495. DOI Scopus106 WoS91 Europe PMC17 |
| 2018 |
Zhang, Z., Wang, H., Liu, L., & Li, J. (2018). Multi-label relational classification via node and label correlation. Neurocomputing, 292, 72-81. DOI Scopus10 WoS9 |
| 2018 |
Liu, J., Zhang, X., Fung, B. C. M., Li, J., & Iqbal, F. (2018). Opportunistic mining of top-n high utility patterns. Information Sciences, 441, 171-186. DOI Scopus17 |
| 2018 |
Zhang, J., Le, T. D., Liu, L., & Li, J. (2018). Inferring and analyzing module-specific lncRNA-mRNA causal regulatory networks in human cancer. Briefings in Bioinformatics, 20(4), 1403-1419. DOI Scopus45 WoS41 Europe PMC38 |
| 2018 |
Zhang, W., Le, T. D., Liu, L., & Li, J. (2018). Estimating heterogeneous treatment effect by balancing heterogeneity and fitness. BMC Bioinformatics, 19(Suppl 19), 12 pages. DOI Scopus5 WoS4 Europe PMC1 |
| 2017 |
Le, T. D., Zhang, J., Liu, L., & Li, J. (2017). Computational methods for identifying miRNA sponge interactions. Briefings in Bioinformatics, 18(4), 577-590. DOI Scopus76 WoS67 Europe PMC70 |
| 2017 |
Liu, H., Liu, L., Le, T. D., Lee, I., Sun, S., & Li, J. (2017). Nonparametric Sparse Matrix Decomposition for Cross-View Dimensionality Reduction. IEEE Transactions on Multimedia, 19(8), 1848-1859. DOI Scopus18 WoS18 |
| 2017 |
Xu, T., Le, T. D., Liu, L., Su, N., Wang, R., Sun, B., . . . Li, J. (2017). CancerSubtypes: An R/Bioconductor package for molecular cancer subtype identification, validation and visualization. Bioinformatics, 33(19), 3131-3133. DOI Scopus191 WoS189 Europe PMC178 |
| 2017 |
Zhang, W., Le, T. D., Liu, L., Zhou, Z. H., & Li, J. (2017). Mining heterogeneous causal effects for personalized cancer treatment. Bioinformatics, 33(15), 2372-2378. DOI Scopus35 WoS33 Europe PMC9 |
| 2017 |
Zhang, J., Le, T. D., Liu, L., & Li, J. (2017). Inferring miRNA sponge co-regulation of protein-protein interactions in human breast cancer. BMC Bioinformatics, 18(1), 12 pages. DOI Scopus23 WoS20 Europe PMC15 |
| 2017 |
Zhang, J., Le, T. D., Liu, L., & Li, J. (2017). Identifying miRNA sponge modules using biclustering and regulatory scores. BMC Bioinformatics, 18(Suppl 3), 12 pages. DOI Scopus18 WoS16 Europe PMC12 |
| 2017 |
Li, J., Ma, S., Le, T., Liu, L., & Liu, J. (2017). Causal Decision Trees. IEEE transactions on knowledge and data engineering, 29(2), 257-271. DOI Scopus57 WoS41 |
| 2017 |
Li, J., Liu, L., Liu, J., & Green, R. (2017). Building Diversified Multiple Trees for classification in high dimensional noisy biomedical data. Health information science and systems, 5(5), 1-10. DOI Scopus5 WoS4 Europe PMC2 |
| 2017 |
Li, J., & Zhang, K. (2017). Guest Editorial: Special Issue on Causal Discovery 2017. International journal of data science and analytics, 3(2), 79-80. DOI |
| 2016 |
Hoang, T., Liu, J., Pratt, N., Zheng, V. W., Chang, K. C., Roughead, E., & Li, J. (2016). Detecting signals of detrimental prescribing cascades from social media. Artificial Intelligence in Medicine, 71, 43-56. DOI Scopus15 WoS13 Europe PMC7 |
| 2016 |
Jamali, A., Ferdousi, R., Razzaghi, S., Li, J., Safdari, R., & Ebrahimie, E. (2016). DrugMiner: comparative analysis of machine learning algorithms for prediction of potential druggable proteins. Drug Discovery Today, 21(5), 718-724. DOI Scopus85 WoS77 Europe PMC60 |
| 2016 |
Li, J., Le, T. D., Liu, L., Liu, J., Jin, Z., Sun, B., & Ma, S. (2016). From observational studies to causal rule mining. ACM transactions on intelligent systems and technology, 7(2, article no. 14), 1-27. DOI Scopus39 WoS16 |
| 2016 |
Ma, S., Li, J., Liu, L., & Le, T. D. (2016). Mining combined causes in large data sets. Knowledge Based Systems, 92, 104-111. DOI Scopus18 WoS13 |
| 2016 |
Zhang, W., Le, T. D., Liu, L., Zhou, Z. H., & Li, J. (2016). Predicting miRNA targets by integrating gene Regulatory knowledge with Expression profiles. Plos One, 11(4), 19 pages. DOI Scopus16 WoS22 Europe PMC11 |
| 2016 |
Xu, T., Le, T. D., Liu, L., Wang, R., Sun, B., & Li, J. (2016). Identifying cancer subtypes from miRNA-TFmRNA regulatory networks and expression data. Plos One, 11(4), 20 pages. DOI Scopus64 WoS52 Europe PMC39 |
| 2016 |
Masud Karim, S. M., Liu, L., Le, T. D., & Li, J. (2016). Identification of miRNA-mRNA regulatory modules by exploring collective group relationships. BMC Genomics, 17(1), 14 pages. DOI Scopus27 WoS22 Europe PMC17 |
| 2016 |
Zhang, J., Le, T. D., Liu, L., He, J., & Li, J. (2016). A novel framework for inferring condition-specific TF and miRNA co-regulation of protein-protein interactions. Gene, 577(1), 55-64. DOI Scopus9 WoS10 Europe PMC8 |
| 2016 |
Zhang, J., Duy Le, T., Liu, L., He, J., & Li, J. (2016). Identifying miRNA synergistic regulatory networks in heterogeneous human data via network motifs. Molecular Biosystems, 12(2), 454-463. DOI Scopus11 WoS10 Europe PMC11 |
| 2016 |
Deng, K., Li, J., Pang, C., & Zhou, X. (2016). Access time oracle for planar graphs. IEEE transactions on knowledge and data engineering, 28(8), 1959-1970. DOI Scopus1 |
| 2016 |
Zhang, K., Li, J., Bareinboim, E., Schoelkopf, B., & Pearl, J. (2016). Preface to the ACM TIST special issue on causal discovery and inference. ACM transactions on intelligent systems and technology, 7(2, article no. 17), 1-3. DOI |
| 2016 |
Li, J., Baig, M. M., Sarowar Sattar, A. H. M., Ding, X., Liu, J., & Vincent, M. W. (2016). A hybrid approach to prevent composition attacks for independent data releases. Information Sciences, 367-368, 324-336. DOI Scopus29 WoS19 |
| 2015 |
Le, T. D., Zhang, J., Liu, L., & Li, J. (2015). Ensemble methods for miRNA target prediction from expression data. Plos One, 10(6), 19 pages. DOI Scopus27 WoS21 Europe PMC23 |
| 2015 |
Sun, Y., Li, J., Liu, J., Chow, C., Sun, B., & Wang, R. (2015). Using causal discovery for feature selection in multivariate numerical time series. Machine Learning, 101(1-3), 377-395. DOI Scopus85 WoS65 |
| 2015 |
Le, T. D., Zhang, J., Liu, L., Liu, H., & Li, J. (2015). miRLAB: An R Based Dry Lab for Exploring miRNA-mRNA Regulatory Relationships. PLOS One, 10(12), 1-15. DOI Scopus28 WoS23 Europe PMC22 |
| 2015 |
Xia, W., Heatherly, R., Ding, X., Li, J., & Malin, B. A. (2015). R-U policy frontiers for health data de-identification. Journal of the American Medical Informatics Association, 22(5), 1029-1041. DOI Scopus20 Europe PMC15 |
| 2014 |
Sun, B. Y., Wang, H. L., Li, W. B., Wang, H. J., Li, J., & Du, Z. Q. (2014). Constructing and combining orthogonal projection vectors for ordinal regression. Neural Processing Letters, 41(1), 139-155. DOI Scopus7 |
| 2014 |
Sun, Y., Li, J., Liu, J., Sun, B., & Chow, C. (2014). An improvement of symbolic aggregate approximation distance measure for time series. Neurocomputing, 138, 189-198. DOI Scopus138 WoS105 |
| 2014 |
Zhang, J., Thuc, D., Liu, L., Liu, B., He, J., Goodall, G., & Li, J. (2014). Inferring condition-specific miRNA activity from matched miRNA and mRNA expression data. Bioinformatics, 30(21), 3070-3077. DOI Scopus22 WoS19 Europe PMC18 |
| 2014 |
Zhang, J., Thuc, D., Liu, L., Liu, B., He, J., Goodall, G., & Li, J. (2014). Identifying direct miRNA-mRNA causal regulatory relationships in heterogeneous data. Journal of Biomedical Informatics, 52, 438-447. DOI Scopus27 WoS25 Europe PMC24 |
| 2014 |
Le, T. D., Liu, L., Zhang, J., Liu, B., & Li, J. (2014). From miRNA regulation to miRNA-TF co-regulation: Computational approaches and challenges. Briefings in Bioinformatics, 16(3), 475-496. DOI Scopus39 WoS34 Europe PMC26 |
| 2014 |
Li, J., Liu, J., Toivonen, H., Satou, K., Sun, Y., & Sun, B. (2014). Discovering statistically non-redundant subgroups. Knowledge Based Systems, 67, 315-327. DOI Scopus18 WoS17 |
| 2014 |
Sarowar Sattar, A. H. M., Li, J., Liu, J., Heatherly, R., & Malin, B. (2014). A probabilistic approach to mitigate composition attacks on privacy in non-coordinated environments. Knowledge Based Systems, 67, 361-372. DOI Scopus26 WoS18 Europe PMC1 |
| 2014 |
Zhang, Z., Li, J., Pan, L., Ye, Y., Zeng, X., Song, T., . . . Wang, E. K. (2014). A novel visualization of DNA sequences, reflecting GC-content. Match: communications in mathematical and in computer chemistry, 72(2), 533-550. Scopus9 |
| 2014 |
Liu, B., Li, J., & Cairns, M. J. (2014). Identifying miRNAs, targets and functions. Briefings in bioinformatics, 15(1), 1-19. DOI Scopus485 WoS488 Europe PMC399 |
| 2013 |
Jiao, H., Liu, J., Li, J., & Liu, C. (2013). A two-layer multi-dimensional trustworthiness metric for web service composition. Web Technologies and Applications: 15th Asia-Pacific Web Conference, APWeb 2013, Sydney, Australia, April 2013. Proceedings, 7808 LNCS, 151-162. DOI |
| 2013 |
Sarowar Sattar, A. H. M., Li, J., Ding, X., Liu, J., & Vincent, M. (2013). A general framework for privacy preserving data publishing. Knowledge Based Systems, 54, 276-287. DOI Scopus32 WoS24 |
| 2013 |
Liu, H., Li, J., Liu, L., Liu, J., Lee, I., & Zhao, J. (2013). Exploring groups from heterogeneous data via sparse learning. Lecture notes in computer science, 7818 LNAI(PART 1), 556-567. DOI Scopus1 |
| 2013 |
Li, J., Liu, J., Toivonen, H., & Yong, J. (2013). Effective pruning for the discovery of conditional functional dependencies. Computer Journal, 56(3), 378-392. DOI Scopus21 WoS10 |
| 2013 |
Liu, J., Ye, F., Li, J., & Wang, J. (2013). On discovery of functional dependencies from data. Data and Knowledge Engineering, 86, 146-159. DOI Scopus6 WoS6 |
| 2013 |
Liu, B., Liu, L., Tsykin, A., Goodall, G., Cairns, M., & Li, J. (2013). Discovering functional microRNAmRNA regulatory modules in heterogeneous data. Advances in Experimental Medicine and Biology, 774, 267-290. DOI Scopus3 |
| 2013 |
Le, T., Liu, L., Liu, B., Tsykin, A., Goodall, G., Satou, K., & Li, J. (2013). Inferring microRNA and transcription factor regulatory networks in heterogeneous data. BMC Bioinformatics, 14(article no. 92), 1-13. DOI Scopus39 WoS40 Europe PMC32 |
| 2013 |
Le, T., Liu, L., Tsykin, A., Goodall, G., Liu, B., Sun, B., & Li, J. (2013). Inferring microRNA-mRNA causal regulatory relationships from expression data. Bioinformatics, 29(6), 765-771. DOI Scopus72 WoS70 Europe PMC50 |
| 2012 |
Sun, X., Wang, H., Li, J., & Zhang, Y. (2012). An approximate microaggregation approach for microdata protection. Expert systems with applications, 39(2), 2211-2219. DOI Scopus12 WoS11 |
| 2012 |
Sun, X., Wang, H., Li, J., & Zhang, Y. (2012). Satisfying privacy requirements before data anonymization. Computer journal, 55(4), 422-437. DOI Scopus53 WoS41 |
| 2012 |
Baig, M. M., Li, J., Liu, J., Ding, X., & Wang, H. (2012). Data privacy against composition attack. Lecture notes in computer science, 7238 LNCS(PART 1), 320-334. DOI Scopus11 |
| 2012 |
Liu, J., Li, J., Liu, C., & Chen, Y. (2012). Discover dependencies from data - A review. IEEE Transactions on Knowledge and Data Engineering, 24(2), 251-264. DOI Scopus130 WoS82 |
| 2012 |
Zhang, J., Liu, B., Jianfeng, H., Ma, L., & Li, J. (2012). Inferring functional miRNA-mRNA regulatory modules in epithelial-mesenchymal transition with a probabilistic topic model. Computers in biology and medicine, 42(4), 428-437. DOI Scopus8 WoS8 Europe PMC6 |
| 2012 |
Tran, V. A., Clemente, J. C., Nguyen, D. T., Li, J., Dang, X. T., Le, T. T. K., . . . Satou, K. (2012). IMPACT: a novel clustering algorithm based on attraction. Journal of computers, 7(3), 653-665. DOI |
| 2012 |
Zhang, Q., Zhang, J., Gao, J., Jianfeng, H., Yan, X., Ma, L., . . . Li, J. (2012). A study of the single point mutation loci in the Hepatitis B Virus sequences via optimal risk and preventive sets with weights. Lecture notes in computer science, 7235, 460-471. DOI |
| 2012 |
Natarajan, K., Li, J., & Koronios, A. (2012). Detecting data inconsistencies by multiple target rules. International Journal of Business and Systems Research, 6(3), 296-312. DOI Scopus2 |
| 2012 |
Zhao, Y., Li, J., Christen, P., & Kennedy, P. J. (2012). Preface. Conferences in Research and Practice in Information Technology Series, 134, vii. |
| 2011 |
Sun, B. Y., Zhu, Z. H., Li, J., & Linghu, B. (2011). Combined feature selection and cancer prognosis using support vector machine regression. IEEE - ACM Transactions on Computational Biology and Bioinformatics, 8(6, article no. 5654498), 1671-1677. DOI Scopus36 Europe PMC12 |
| 2011 |
Zhang, J., Jianfeng, H., Ma, L., & Li, J. (2011). ORPSW: A new classifier for gene expression data based on optimal risk and preventive patterns. Journal of computers, 6(6), 1198-1205. DOI Scopus1 |
| 2011 |
Li, J., Liu, J., Baig, M., & Wong, R. C. W. (2011). Information based data anonymization for classification utility. Data and Knowledge Engineering, 70(12), 1030-1045. DOI Scopus38 WoS28 |
| 2011 |
Zhang, Z., Liu, L., Li, J., & Zhang, Z. (2011). Spectral representation of protein sequences. Journal of computational and theoretical nanoscience, 8(7), 1335-1339. DOI Scopus7 WoS6 |
| 2011 |
Sun, X., Wang, H., Li, J., & Zhang, Y. (2011). Injecting Purpose and Trust into Data Anonymisation. Computers and security, 30(5), 332-345. DOI Scopus36 WoS32 |
| 2011 |
Sun, X., Wang, H., Li, J., & Pei, J. (2011). Publishing anonymous survey rating data. Data mining and knowledge discovery, 23(3), 379-406. DOI Scopus49 WoS37 |
| 2010 |
Liu, B., Liu, L., Tsykin, A., Goodall, G., Green, J., Zhu, M., . . . Li, J. (2010). Identifying functional miRNA-mRNA regulatory module with correspondence latent dirichlet allocation. Bioinformatics, 26(24), 3105-3111. DOI Scopus88 WoS84 Europe PMC50 |
| 2010 |
Sun, B. Y., Li, J., Wu, D. D., Zhang, X. M., & Li, W. B. (2010). Kernel discriminant learning for ordinal regression. IEEE transactions on knowledge and data engineering, 22(6), 906-910. DOI Scopus136 |
| 2010 |
Sun, B. Y., Zhang, X. M., Li, J., & Mao, X. M. (2010). Feature fusion using locally linear embedding for classification. IEEE transactions on neural networks, 21(1), 163-168. DOI Scopus73 Europe PMC5 |
| 2010 |
Zhang, F., Li, J., Hu, H., & Zhou, H. (2010). A robust ensemble classification method analysis. Advances in Experimental Medicine and Biology, 680, 149-155. DOI |
| 2010 |
Li, J., Christen, P., & Kennedy, P. J. (2010). Preface. Conferences in Research and Practice in Information Technology Series, 121. |
| 2009 |
Li, J., Fu, A. W., & Fahey, P. (2009). Efficient discovery of risk patterns in medical data. Artificial intelligence in medicine, 45(1), 77-89. DOI Scopus45 Europe PMC12 |
| 2009 |
Khalil, F., Li, J., & Wang, H. (2009). An integrated model for next page access prediction. International Journal of Knowledge and Web Intelligence, 1(1/2), 48-80. DOI |
| 2009 |
Wong, R., Li, J., Fu, A. W., & Wang, K. (2009). (a, k)-anonymous data publishing. Journal of Intelligent Information Systems, 33(2), 210-234. DOI |
| 2009 |
Liu, B., Li, J., Tsykin, A., Liu, L., Gaur, A., & Goodall, G. (2009). Exploring complex miRNA-mRNA interactions with Bayesian networks by splitting-averaging strategy. BMC Bioinformatics, 10(408), 1-19. DOI Scopus74 WoS60 Europe PMC61 |
| 2009 |
Liu, B., Li, J., & Tsykin, A. (2009). Discovery of functional miRNA-mRNA regulatory modules with computational methods. Journal of Biomedical Informatics, 42(4), 685-691. DOI Scopus48 WoS44 Europe PMC34 |
| 2008 |
Sun, X., Wang, H., Li, J., & Truta, T. M. (2008). Enhanced P-sensitive K-anonymity models for privacy preserving data publishing. Transactions on data privacy. Foundations and technologies, 1(2), 53-66. WoS49 |
| 2008 |
Li, J., Chi Wing, W. R., Wai Chee, F. A., & Pei, J. (2008). Anonymization by local recoding in data with attribute hierarchical taxonomies. IEEE transactions on knowledge and data engineering, 20(9), 1181-1194. DOI Scopus45 |
| 2008 |
Leng, J., Li, J., & Jain, L. (2008). A role-orientated BDI framework for real-time multiagent teaming. Intelligent decision technologies, 2(4), 205-217. DOI Scopus1 |
| 2008 |
Li, J., Wang, H., Jin, H., & Yong, J. (2008). Current development of k-Anonymous data releasing. Electronic journal of health informatics, 3(1), 1-9. |
| 2008 |
Leng, J., Li, J., & Jain, L. (2008). A role-oriented BDI framework for real-time multiagent teaming. Intelligent Decision Technologies, 2(4), 205-217. DOI |
| 2006 |
Li, J. (2006). On optimal rule discovery. IEEE transactions on knowledge and data engineering. DOI |
| 2006 |
Li, J. (2006). Robust rule-based prediction. IEEE transactions on knowledge and data engineering, 18(8), 1043-1054. DOI |
| 2006 |
Li, J., & Jones, J. (2006). Using multiple and negative target rules to make classifiers more understandable. Knowledge-Based Systems, 19(6), 438-444. DOI |
| 2004 |
Li, J., Shen, H., & Topor, R. (2004). Mining informative rule set for prediction. Journal of Intelligent Information Systems, 22(2), 155-174. DOI Scopus12 |
| 2002 |
Li, J., Shen, H., & Topor, R. (2002). Mining the optimal class association rule set. Knowledge-Based Systems, 15(7), 399-405. DOI Scopus55 |