| 2024 |
Michalski, H., Mattner, T., Balasuriya, S., & Binder, B. (2024). The effect of obstacle length and height in subcritical free-surface flow. Theoretical and Computational Fluid Dynamics, 38(4), 511-530.
DOI |
| 2023 |
Li, K., Gallo, A. J., Binder, B. J., & Green, J. E. F. (2023). A mathematical model for nutrient–limited uniaxial growth of a compressible tissue. Journal of Theoretical Biology, 575, 111631-1-111631-12.
DOI |
| 2023 |
Robbins, C., Blyth, M. G., MacLean, J., & Binder, B. J. (2023). A method to calculate inverse solutions for steady open channel free-surface flow. Journal of Fluid Mechanics, 977, 22 pages.
DOI Scopus1 |
| 2022 |
Tam, A. K. Y., Harding, B., Green, J. E. F., Balasuriya, S., & Binder, B. J. (2022). Thin-film lubrication model for biofilm expansion under strong adhesion. Physical Review E, 105(1), 1-15.
DOI Scopus3 Europe PMC1 |
| 2022 |
Brown, P. J., Green, J. E. F., Binder, B. J., & Osborne, J. M. (2022). Publisher Correction: A rigid body framework for multicellular modeling. Nature Computational Science, 2(1), 59.
DOI |
| 2021 |
Gallo, A. J., Tronnolone, H., Green, J. E., & Binder, B. J. (2021). Modelling uniaxial non-uniform yeast colony growth: comparing an agent-based model and continuum approximations. Journal of Theoretical Biology, 523, 110715-1-110715-13.
DOI Scopus1 |
| 2021 |
Brown, P. J., Green, J. E. F., Binder, B. J., & Osborne, J. M. (2021). A rigid body framework for multicellular modeling. Nature Computational Science, 1(11), 754-766.
DOI Scopus7 WoS4 Europe PMC2 |
| 2020 |
De Oliveira, A. L., & Binder, B. J. (2020). Discrete Manhattan and Chebyshev pair correlation functions in k dimensions. PHYSICAL REVIEW E, 102(1), 11 pages.
DOI Scopus3 WoS2 Europe PMC1 |
| 2019 |
Lai De Oliveira, A., & Binder, B. J. (2019). Modeling u8niaxial nonuniform cell proliferation. Bulletin of Mathematical Biology, 81(7), 2220-2238.
DOI Scopus3 WoS3 Europe PMC2 |
| 2019 |
Binder, B. J. (2019). Steady two-dimensional free-surface flow past disturbances in an open channel: Solutions of the Korteweg-de Vries equation and analysis of the weakly nonlinear phase space. Fluids, 4(1), 23 pages.
DOI Scopus9 WoS5 |
| 2019 |
Tam, A., Green, J. E. F., Balasuriya, S., Tek, E. L., Gardner, J. M., Sundstrom, J. F., . . . Binder, B. J. (2019). A thin-film extensional flow model for biofilm expansion by sliding motility. Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences, 475(2229), 20190175-1-20190175-21.
DOI Scopus10 WoS5 Europe PMC1 |
| 2018 |
Dini, S., Binder, B., & Green, J. (2018). Understanding interactions between populations: individual based modelling and quantification using pair correlation functions. Journal of Theoretical Biology, 439, 50-64.
DOI Scopus12 WoS11 Europe PMC8 |
| 2018 |
Tam, A., Green, J., Balasuriya, S., Tek, E., Gardner, J., Sundstrom, J., . . . Binder, B. (2018). Nutrient-limited growth with non-linear cell diffusion as a mechanism for floral pattern formation in yeast biofilms. Journal of Theoretical Biology, 448, 122-141.
DOI Scopus14 WoS11 Europe PMC5 |
| 2018 |
Tronnolone, H., Tam, A., Szenczi, Z., Green, J., Balasuriya, S., Tek, E., . . . Binder, B. (2018). Diffusion-limited growth of microbial colonies. Scientific Reports, 8(1), 5992-1-5992-11.
DOI Scopus26 WoS21 Europe PMC9 |
| 2018 |
Gontar, A., Tronnolone, H., Binder, B., & Bottema, M. (2018). Characterising shape patterns using features derived from best-fitting ellipsoids. Pattern Recognition, 83, 365-374.
DOI Scopus4 WoS3 |
| 2018 |
Gontar, A., Bottema, M. J., Binder, B. J., & Tronnolone, H. (2018). Characterizing the shape patterns of dimorphic yeast pseudohyphae. Royal Society Open Science, 5(10), 180820-1-180820-12.
DOI Scopus4 WoS3 |
| 2018 |
Keeler, J., Binder, B., & Blyth, M. (2018). Steady two-dimensional free-surface flow over semi-infinite and finite-length corrugations in an open channel. Physical Review Fluids, 3(11), 114804-1-114804-11.
DOI Scopus2 WoS2 |
| 2018 |
Tronnolone, H., Gardner, J., Sundstrom, J., Jiranek, V., Oliver, S., & Binder, B. (2018). TAMMiCol: tool for analysis of the morphology of microbial colonies. PLoS Computational Biology, 14(12), e1006629-1-e1006629-15.
DOI Scopus5 WoS4 Europe PMC3 |
| 2017 |
Newgreen, D., Zhang, D., Cheeseman, B., Binder, B., & Landman, K. (2017). Differential clonal expansion in an invading cell population: clonal advantage or dumb luck?. Cells Tissues Organs, 203(2), 105-113.
DOI Scopus9 WoS8 Europe PMC3 |
| 2017 |
Wade, S., Binder, B., Mattner, T., & Denier, J. (2017). Steep waves in free-surface flow past narrow topography. Physics of Fluids, 29(6), 062107-1-062107-6.
DOI Scopus7 WoS5 |
| 2017 |
Tronnolone, H., Gardner, J., Sundstrom, J., Jiranek, V., Oliver, S., & Binder, B. (2017). Quantifying the dominant growth mechanisms of dimorphic yeast using a lattice-based model. Journal of the Royal Society Interface, 14(134), 20170314-1-20170314-16.
DOI Scopus14 WoS14 Europe PMC8 |
| 2017 |
Keeler, J., Binder, B., & Blyth, M. (2017). On the critical free-surface flow over localised topography. Journal of Fluid Mechanics, 832, 73-96.
DOI Scopus10 WoS7 |
| 2016 |
Binder, B., & Simpson, M. (2016). Cell density and cell size dynamics during in vitro tissue growth experiments: implications for mathematical models of collective cell behaviour. Applied Mathematical Modelling, 40(4), 3438-3446.
DOI Scopus6 WoS6 |
| 2016 |
Johnston, S. T., Ross, J. V., Binder, B. J., Sean McElwain, D. L., Haridas, P., & Simpson, M. J. (2016). Quantifying the effect of experimental design choices for in vitro scratch assays. Journal of Theoretical Biology, 400, 19-31.
DOI Scopus34 WoS30 Europe PMC14 |
| 2016 |
Cui, X., Dini, S., Dai, S., Bi, J., Binder, B., Green, J., & Zhang, H. (2016). A mechanistic study on tumour spheroids formation in thermosensitive hydrogels: experiments and mathematical modelling. RSC Advances, 6(77), 73282-73291.
DOI Scopus26 WoS20 |
| 2016 |
Dini, S., Binder, B., Fischer, S., Mattheyer, C., Schmitz, A., Stelzer, E., . . . Green, J. (2016). Identifying the necrotic zone boundary in tumour spheroids with pair-correlation functions. Journal of the Royal Society Interface, 13(123), 20160649-1-20160649-11.
DOI Scopus24 WoS14 Europe PMC11 |
| 2015 |
Binder, B., Sundstrom, J., Gardner, J., Jiranek, V., & Oliver, S. (2015). Quantifying two-dimensional filamentous and invasive growth spatial patterns in yeast colonies. PLoS Computational Biology, 11(2), e1004070-1-e1004070-15.
DOI Scopus15 WoS12 Europe PMC7 |
| 2015 |
Binder, B. J., Landman, K. A., Newgreen, D. F., & Ross, J. V. (2015). Incomplete penetrance: the role of stochasticity in developmental cell colonization. Journal of Theoretical Biology, 380, 309-314.
DOI Scopus7 WoS7 Europe PMC4 |
| 2015 |
Binder, B., & Simpson, M. (2015). Spectral analysis of pair-correlation bandwidth: application to cell biology images. Royal Society Open Science, 2(2), 140494-1-140494-15.
DOI Scopus18 WoS17 Europe PMC8 |
| 2015 |
Binder, B., Blyth, M., & Balasuriya, S. (2015). Steady free-surface flow over spatially periodic topography. Journal of Fluid Mechanics, 781, R3-1-R3-14.
DOI Scopus4 WoS5 |
| 2015 |
Tam, A., Yu, Z., Kelso, R., & Binder, B. (2015). Predicting channel bed topography in hydraulic falls. Physics of Fluids, 27(11), 112106-1-112106-7.
DOI Scopus8 WoS7 |
| 2014 |
Wade, S., Binder, B., Mattner, T., & Denier, J. (2014). On the free-surface flow of very steep forced solitary waves. Journal of Fluid Mechanics, 739, 1-21.
DOI Scopus9 WoS6 |
| 2014 |
Cheeseman, B., Zhang, D., Binder, B., Newgreen, D., & Landman, K. (2014). Cell lineage tracing in the developing enteric nervous system: superstars revealed by experiment and simulation. Journal of the Royal Society. Interface, 11(93), 20130815-1-20130815-14.
DOI Scopus33 WoS31 Europe PMC21 |
| 2014 |
Agnew, D., Green, J., Brown, T., Simpson, M., & Binder, B. (2014). Distinguishing between mechanisms of cell aggregation using pair-correlation functions. Journal of Theoretical Biology, 352, 16-23.
DOI Scopus45 WoS41 Europe PMC22 |
| 2014 |
Davies, K., Green, J., Bean, N., Binder, B., & Ross, J. (2014). On the derivation of approximations to cellular automata models and the assumption of independence. Mathematical Biosciences, 253(1), 63-71.
DOI Scopus9 WoS6 Europe PMC3 |
| 2014 |
Ross, J. V., & Binder, B. J. (2014). Approximating spatially exclusive invasion processes. Physical Review E: Statistical, Nonlinear, and Soft Matter Physics, 89(5), 052709-1-052709-7.
DOI Scopus2 WoS2 |
| 2014 |
Treloar, K., Simpson, M., Binder, B., McElwain, D., & Baker, R. (2014). Assessing the role of spatial correlations during collective cell spreading. Science Reports, 4(1), 5713-1-5713-8.
DOI Scopus23 WoS22 Europe PMC15 |
| 2014 |
Binder, B., Blyth, M., & Balasuriya, S. (2014). Non-uniqueness of steady free-surface flow at critical Froude number. EPL, 105(4), 44003-1-44003-6.
DOI Scopus19 WoS18 |
| 2014 |
Balasuriya, S., & Binder, B. (2014). Nonautonomous analysis of steady Korteweg-de Vries waves under nonlocalised forcing. Physica D: Nonlinear Phenomena, 285, 28-41.
DOI Scopus7 WoS8 |
| 2014 |
Johnston, S., Simpson, M., McElwain, D., Binder, B., & Ross, J. (2014). Interpreting scratch assays using pair density dynamics and approximate Bayesian computation. Open Biology, 4(9), 140097-1-140097-9.
DOI Scopus37 WoS35 Europe PMC19 |
| 2014 |
Landman, K., Binder, B., & Newgreen, D. (2014). Modeling development and disease in the enteric nervous system. Journal of Cellular Automata, 9(2-3), 95-109.
Scopus1 WoS1 |
| 2013 |
Binder, B., & Simpson, M. (2013). Quantifying spatial structure in experimental observations and agent-based simulations using pair-correlation functions. Physical Review E. (Statistical, Nonlinear, and Soft Matter Physics), 88(2), 1-10.
DOI Scopus37 WoS35 Europe PMC18 |
| 2013 |
Binder, B., Blyth, M., & McCue, S. (2013). Free-surface flow past arbitrary topography and an inverse approach for wave-free solutions. IMA Journal of Applied Mathematics, 78(4), 685-696.
DOI Scopus24 WoS20 |
| 2013 |
Simpson, M., Binder, B., Haridas, P., Wood, B., Treloar, K., McElwain, D., & Baker, R. (2013). Experimental and modelling investigation of monolayer development with clustering. Bulletin of Mathematical Biology, 75(5), 871-889.
DOI Scopus37 Europe PMC28 |
| 2013 |
Simpson, M., Treloar, K., Binder, B., Haridas, P., Manton, K., Leavesley, D., . . . Baker, R. (2013). Quantifying the roles of cell motility and cell proliferation in a circular barrier assay. Journal of the Royal Society. Interface, 10(82), 1-11.
DOI Scopus83 WoS76 Europe PMC59 |
| 2012 |
Binder, B., & Blyth, M. (2012). Electrified free-surface flow of an inviscid liquid past topography. Physics of Fluids, 24(10), 1-17.
DOI Scopus8 WoS6 |
| 2012 |
Binder, B., HackettJones, E., Tuke, S., & Landman, K. (2012). A modified Pólya urn process and an index for spatial distributions with volume exclusion. The ANZIAM Journal, 53(2), 122-133.
DOI Scopus3 WoS3 |
| 2012 |
Lustri, C., McCue, S., & Binder, B. (2012). Free surface flow past topography: A beyond-all-orders approach. European Journal of Applied Mathematics, 23(4), 441-467.
DOI Scopus33 WoS26 |
| 2012 |
HackettJones, E., Davies, K., Binder, B., & Landman, K. (2012). Generalized index for spatial data sets as a measure of complete spatial randomness. Physical Review E. (Statistical, Nonlinear, and Soft Matter Physics), 85(6), 1-9.
DOI Scopus11 WoS11 Europe PMC6 |
| 2012 |
Binder, B., Landman, K., Newgreen, D., Simkin, J., Takahashi, Y., & Zhang, D. (2012). Spatial analysis of multi-species exclusion processes: Application to neural crest cell migration in the embryonic gut. Bulletin of Mathematical Biology, 74(2), 474-490.
DOI Scopus28 WoS28 Europe PMC16 |
| 2012 |
Binder, B., Ross, J., & Simpson, M. (2012). A hybrid model for studying spatial aspects of infectious diseases. The ANZIAM Journal, 54(1-2), 37-49.
DOI Scopus4 WoS3 |
| 2011 |
Ogilat, O., McCue, S., Turner, I., Belward, J., & Binder, B. (2011). Minimising wave drag for free surface flow past a two-dimensional stern. Physics of Fluids, 23(7), 072101-1-072101-11.
DOI Scopus14 WoS12 |
| 2011 |
Binder, B., & Vanden-Broeck, J. (2011). Hybrid free-surface flows in a two-dimensional channel. Physical Review E. (Statistical, Nonlinear, and Soft Matter Physics), 84(1), 016302-1-016302-10.
DOI Scopus7 WoS5 |
| 2011 |
Binder, B., & Landman, K. (2011). Quantifying evenly distributed states in exclusion and nonexclusion processes. Physical Review E. (Statistical, Nonlinear, and Soft Matter Physics), 83(4), 041914-1-041914-9.
DOI Scopus17 WoS17 Europe PMC9 |
| 2010 |
Zhang, D., Brinas, I., Binder, B., Landman, K., & Newgreen, D. (2010). Neural crest regionalisation for enteric nervous system formation: Implications for Hirschsprung's disease and stem cell therapy. Developmental Biology, 339(2), 280-294.
DOI Scopus55 Europe PMC39 |
| 2010 |
Binder, B. (2010). Steady free-surface flow at the stern of a ship. Physics of Fluids, 22(1), 012104-1-012104-5.
DOI Scopus9 WoS7 |
| 2010 |
Binder, B. (2010). Ghost rods adopting the role of withdrawn baffles in batch mixer designs. Physics Letters A, 374(34), 3483-3486.
DOI Scopus10 WoS9 |
| 2009 |
Newgreen, D., Zhang, D., Binder, B., Simpson, M., Landman, K., Enomoto, H., & Young, H. (2009). Social controls of migration and proliferation of neural crest-derived cells in the gut. Neurogastroenterology and Motility, 21(2), 223.
DOI |
| 2009 |
Binder, B., Vanden-Broeck, J., & Dias, F. (2009). On satisfying the radiation condition in free-surface flows. Journal of Fluid Mechanics, 624, 179-189.
DOI Scopus9 WoS8 |
| 2009 |
Binder, B., & Landman, K. (2009). Tissue growth and the Pólya distribution. Australasian Journal of Engineering Education, 15(2), 35-41. |
| 2009 |
Binder, B. (2009). A non-linear dynamical system: flow past a sluice gate. Australasian Journal of Engineering Education, 15(2), 27-34. |
| 2009 |
Binder, B., & Landman, K. (2009). Exclusion processes on a growing domain. Journal of Theoretical Biology, 259(3), 541-551.
DOI Scopus43 Europe PMC23 |
| 2008 |
Binder, B., Dias, F., & Vanden-Broeck, J. (2008). Influence of rapid changes in a channel bottom on free-surface flows. IMA Journal of Applied Mathematics, 73(1), 254-273.
DOI Scopus29 WoS23 |
| 2008 |
Binder, B., & Cox, S. (2008). A mixer design for the pigtail braid. Fluid Dynamics Research, 40(1), 34-44.
DOI Scopus14 WoS13 |
| 2008 |
Binder, B., Landman, K., Simpson, M., Mariani, M., & Newgreen, D. (2008). Modeling proliferative tissue growth: a general approach and an avian case study. Physical Review E. (Statistical, Nonlinear, and Soft Matter Physics), 78(3), 031912-1-031912-13.
DOI Scopus67 |
| 2007 |
Binder, B., & Vanden-Broeck, J. (2007). The effect of disturbances on the flows under a sluice gate and past an inclined plate. Journal of Fluid Mechanics, 576, 475-490.
DOI Scopus21 |
| 2006 |
Binder, B., Dias, F., & Vanden-Broeck, J. (2006). Steady free-surface flow past an uneven channel bottom. Theoretical and Computational Fluid Dynamics, 20(3), 125-144.
DOI Scopus34 |
| 2005 |
Binder, B., & Vanden-Broeck, J. (2005). Free surface flows past surfboards and sluice gates. European Journal of Applied Mathematics, 16(5), 601-619.
DOI Scopus22 |
| 2005 |
Binder, B., Vanden-Broeck, J., & Dias, F. (2005). Forced solitary waves and fronts past submerged obstacles. Chaos, 15(3), 37106-1-37106-13.
DOI Scopus51 |
| - |
Tam, A., Binder, B., Green, E., Balasuriya, S., Tek, E. L., Gardner, J., . . . Jiranek, V. (n.d.). A thin-film extensional flow model for biofilm expansion by sliding motility.
DOI |
