Stefan Hiendleder

School of Animal and Veterinary Science

Faculty of Sciences, Engineering and Technology

Stefan Hiendleder studied Animal Science 1982-1987 at Justus-Liebig University (JLU) of Giessen, Germany where he obtained a PhD (Dr.agr.) working on sheep endocrinology and cellular metabolism in 1989. He was appointed Assistant Professor Animal Breeding and Genetics at JLU in 1990. After sabbaticals at the Academy of Sciences, Kazakhstan (1991) and the University of Saskatchewan, Canada (1993) he obtained a habilitation degree in Animal Genetics (Dr.agr.habil.) with a thesis on 'Isolation and Characterization of QTL Candidates in Ruminants' in 1996. He worked at JLU as Associate Professor until joining the Molecular Animal Breeding and Biotechnology Group at the Gene Center of the Ludwig Maximilian University (LMU) in Munich, Germany in 2001. Dr. Hiendleder focused on the emerging field of Epigenetics and completed a second habilitation degree in Reproductive Biotechnology and Functional Genomics (Dr.med.vet.habil.) with the thesis ‘Non-Mendelian Effects in Animal Biotechnology'. He was appointed JS Davies Professorial Fellow 2005-2020 and investigates non-mendelian genetic and epigenetic effects in the School of Animal and Veterinary Sciences, Davies Research Centre and the Robinson Research Institute.

My Research
Career
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Teaching
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My research covers Functional Genomics and Reproductive Biology and Biotechnology in animals and humans with a special focus on non-mendelian inheritance and large animal models for human medicine.

Awards and Achievements

Date	Type	Title	Institution Name	Country	Amount
2015	Award	Visiting Professor Award	The University of Sassari	Italy	-
2004	Award	Research Award Molecular Animal Breeding	Academy for Animal Health	Germany	-
1999	Award	H. Wilhelm Schaumann Foundation Award Biotechnology in Animal Breeding	H. Wilhelm Schaumann Foundation	Germany	-
1990	Award	Dissertation Award	Justus Liebig University	Germany	-

Research Interests

Animal Growth and Development Animal Physiology _ Systems Biotechnology Conservation and Biodiversity Genetics Genome Structure and Regulation Population, Ecological and Evolutionary Genetics Reproduction Reproductive Biology

Journals

Year	Citation
2024	MacPhillamy, C., Chen, T., Hiendleder, S., Williams, J. L., Alinejad-Rokny, H., & Low, W. Y. (2024). DNA methylation analysis to differentiate reference, breed, and parent-of-origin effects in the bovine pangenome era. Gigascience, 13, giae061-1-giae061-18. DOI Scopus3 Europe PMC4
2023	Ren, Y., Tseng, E., Smith, T. P. L., Hiendleder, S., Williams, J. L., & Low, W. Y. (2023). Long read isoform sequencing reveals hidden transcriptional complexity between cattle subspecies.. BMC genomics, 24(1), 15 pages. DOI Scopus3 Europe PMC6
2023	MacPhillamy, C., Ren, Y., Chen, T., Hiendleder, S., & Low, W. Y. (2023). MicroRNA breed and parent-of-origin effects provide insights into biological pathways differentiating cattle subspecies in fetal liver. Frontiers in Genetics, 14, 13 pages. DOI Scopus1 Europe PMC1
2023	Estrella, C. A. S., Gatford, K. L., Xiang, R., Javadmanesh, A., Ghanipoor-Samami, M., Nattrass, G. S., . . . Kind, K. L. (2023). Asymmetric growth-limiting development of the female conceptus. Frontiers in Endocrinology, 14, 1306513-1-1306513-14. DOI Scopus5 Europe PMC3
2022	Low, W. Y., Rosen, B. D., Ren, Y., Bickhart, D. M., To, T. -H., Martin, F. J., . . . Smith, T. P. L. (2022). Gaur genome reveals expansion of sperm odorant receptors in domesticated cattle.. BMC genomics, 23(1), 15 pages. DOI Scopus8 WoS1 Europe PMC6
2021	Kronenberg, Z. N., Rhie, A., Koren, S., Concepcion, G. T., Peluso, P., Munson, K. M., . . . Kingan, S. B. (2021). Extended haplotype-phasing of long-read de novo genome assemblies using Hi-C.. Nature communications, 12(1), 1935. DOI Scopus77 WoS32 Europe PMC78
2021	Marsh, L., Hutchinson, M., McLaughlan, C., Musolino, S., Hebart, M. L., Terry, R., . . . Whittaker, A. (2021). Evaluation of miRNA as biomarkers of emotional valence in pigs. Animals, 7(7), 1-19. DOI Scopus5 WoS2 Europe PMC3
2021	Liu, R., Tearle, R., Low, W. Y., Chen, T., Thomsen, D., Smith, T. P. L., . . . Williams, J. L. (2021). Distinctive gene expression patterns and imprinting signatures revealed in reciprocal crosses between cattle sub-species. BMC Genomics, 22(1), 1-10. DOI Scopus9 Europe PMC6
2021	Bebbere, D., Ulbrich, S. E., Giller, K., Zakhartchenko, V., Reichenbach, H. D., Reichenbach, M., . . . Hiendleder, S. (2021). Mitochondrial DNA Depletion in Granulosa Cell Derived Nuclear Transfer Tissues. Frontiers in Cell and Developmental Biology, 9, 13 pages. DOI Scopus4 WoS3 Europe PMC4
2020	Camp, A., Croxford, A. E., Ford, C. S., Baumann, U., Clements, P. R., Hiendleder, S., . . . Wilkinson, M. J. (2020). Dual-locus DNA metabarcoding reveals southern hairy-nosed wombats (Lasiorhinus latifrons Owen) have a summer diet dominated by toxic invasive plants.. PLoS One, 15(3), e0229390. DOI Scopus10 WoS8 Europe PMC7
2020	Low, W. Y., Tearle, R., Liu, R., Koren, S., Rhie, A., Bickhart, D. M., . . . Williams, J. L. (2020). Haplotype-resolved genomes provide insights into structural variation and gene content in Angus and Brahman cattle. Nature communications, 11(1), 1-14. DOI Scopus88 WoS60 Europe PMC82
2020	Latimer-Marsh, L., Terry, R., Whittaker, A., Hiendleder, S., & Ralph, C. (2020). Pronounced inter-individual variation in plasma cortisol response to fluoxetine hydrochloride in the pig. Animals, 10(3), 504-1-504-6. DOI Scopus1
2020	Hiendleder, S., Bottema, C. D. K., & Brunner, R. M. (2020). Nuclear mitochondrial pseudogenes in the cattle genome. Animal Genetics, 51(1), 148-149. DOI Scopus1 WoS2 Europe PMC1
2019	Liu, R., Low, W. Y., Tearle, R., Koren, S., Ghurye, J., Rhie, A., . . . Williams, J. L. (2019). New insights into mammalian sex chromosome structure and evolution using high-quality sequences from bovine X and Y chromosomes.. BMC Genomics, 20(1), 1000. DOI Scopus28 WoS20 Europe PMC22
2019	Liu, R., Low, W. Y., Tearle, R., Koren, S., Ghurye, J., Rhie, A., . . . Williams, J. L. (2019). New Insights into Mammalian Sex Chromosome Structure and Evolution from High-quality Bovine X and Y Chromosome Sequences. DOI
2019	Liu, R., Low, W. Y., Tearle, R., Koren, S., Ghurye, J., Rhie, A., . . . Williams, J. L. (2019). New Insights into Mammalian Sex Chromosome Structure and Evolution from High-quality Bovine X and Y Chromosome Sequences. DOI
2019	Liu, R., Low, W. Y., Tearle, R., Koren, S., Ghurye, J., Rhie, A., . . . Williams, J. L. (2019). New Insights into Mammalian Sex Chromosome Structure and Evolution from High-quality Bovine X and Y Chromosome Sequences. DOI
2018	Ghanipoor-Samami, M., Javadmanesh, A., Burns, B., Thomsen, D., Nattrass, G., Estrella, C., . . . Hiendleder, S. (2018). Atlas of tissue- and developmental stage specific gene expression for the bovine insulin-like growth factor (IGF) system. PLoS ONE, 13(7), e0200466. DOI Scopus24 WoS13 Europe PMC13
2018	Burns, B., Hiendleder, S., Laing, A., Fordyce, G., & Herring, A. (2018). Ultrasonographic measurements in first trimester concepti identify predictors of birth weight and postnatal development in cattle. Journal of Animal Science, 96(10), 4186-4194. DOI Scopus5 WoS3 Europe PMC2
2018	Koren, S., Rhie, A., Walenz, B. P., Dilthey, A. T., Bickhart, D. M., Kingan, S. B., . . . Phillippy, A. M. (2018). De novo assembly of haplotype-resolved genomes with trio binning. Nature biotechnology, 36(12), 1174-1182. DOI Scopus314 WoS193 Europe PMC316
2017	Estrella, C. A. S., Kind, K. L., Derks, A., Xiang, R., Faulkner, N., Mohrdick, M., . . . Hiendleder, S. (2017). Remodelling of the bovine placenta: Comprehensive morphological and histomorphological characterization at the late embryonic and early accelerated fetal growth stages. Placenta, 55, 37-46. DOI Scopus7 WoS4 Europe PMC2
2015	Kleemann, D., Kelly, J., Rudiger, S., McMillen, I., Morrison, J., Zhang, S., . . . Walker, S. (2015). Effect of periconceptional nutrition on the growth, behaviour and survival of the neonatal lamb. Animal Reproduction Science, 160, 12-22. DOI Scopus19 WoS16 Europe PMC10
2014	Fariello, M., Servin, B., Tosser-Klopp, G., Rupp, R., Moreno, C., Cristobal, M., . . . Whan, V. (2014). Selection signatures in worldwide sheep populations. PLoS One, 9(8), e103813-1-e103813. DOI Scopus133
2014	Brien, F. D., Cloete, S. W. P., Fogarty, N. M., Greeff, J. C., Hebart, M. L., Hiendleder, S., . . . Miller, D. R. (2014). A review of the genetic and epigenetic factors affecting lamb survival. Animal Production Science, 54(6), 667-693. DOI Scopus52 WoS44
2014	Xiang, R., Lee, A., Eindorf, T., Javadmanesh, A., Ghanipoor-Samami, M., Gugger, M., . . . Hiendleder, S. (2014). Widespread differential maternal and paternal genome effects on fetal bone phenotype at mid-gestation. Journal of Bone and Mineral Research, 29(11), 2392-2404. DOI Scopus10 WoS5 Europe PMC8
2013	Heaton, M., & Hiendleder, S. (2013). Genetic testing for TMEM154 mutations associated with lentivirus susceptibility in sheep. PLoS One, 8(2), e55490-1-e55490-11. DOI
2013	Bebbere, D., Bauersachs, S., Furst, R., Reichenbach, H., Reichenbach, M., Medugorac, I., . . . Hiendleder, S. (2013). Tissue-specific and minor inter-individual variation in imprinting of IGF2R is a common feature of Bos taurus Concepti and not correlated with fetal weight. PLoS One, 8(4), 1-7. DOI Scopus13 WoS10 Europe PMC7
2013	Xiang, R., Ghani Poor Samami, M., Johns, W., Eindorf, T., Rutley, D., Kruk, Z., . . . Hiendleder, S. (2013). Maternal and paternal genomes differentially affect myofibre characteristics and muscle weights of bovine fetuses at midgestation. PLoS One, 8(1), 1-15. DOI Scopus12 WoS7 Europe PMC11
2012	Buckberry, S., Bianco-Miotto, T., Hiendleder, S., & Roberts, C. (2012). Quantitative allele-specific expression and DNA methylation analysis of H19, IGF2 and IGF2R in the human placenta across gestation reveals H19 imprinting plasticity. PLoS One, 7(12), 1-11. DOI Scopus29 WoS23 Europe PMC23
2012	Kijas, J. W., Lenstra, J. A., Hayes, B., Boitard, S., Neto, L. R. P., San Cristobal, M., . . . Dalrymple, B. (2012). Genome-Wide Analysis of the World's Sheep Breeds Reveals High Levels of Historic Mixture and Strong Recent Selection. PLOS BIOLOGY, 10(2), 14 pages. DOI WoS547 Europe PMC498
2011	Anand Ivell, R., Hiendleder, S., Vinoles, C., Martin, G., Fitzsimmons, C., Eurich, A., . . . Ivell, R. (2011). INSL3 in the ruminant: A powerful indicator of gender- and genetic-specific feto-maternal dialogue. PLoS One, 6(5), 1-7. DOI Scopus47 WoS38 Europe PMC25
2011	Meadows, J., Hiendleder, S., & Kijas, J. (2011). Haplogroup relationships between domestic and wild sheep resolved using a mitogenome panel. Heredity, 106(4), 700-706. DOI Scopus107 WoS85 Europe PMC62
2011	Ulbrich, S., Meyer, S., Zitta, K., Hiendleder, S., Sinowatz, F., Bauersachs, S., . . . Meyer, H. (2011). Bovine endometrial metallopeptidases MMP14 and MMP2 and the metallopeptidase inhibitor TIMP2 participate in maternal preparation of pregnancy. Molecular and Cellular Endocrinology, 332(1-2), 48-57. DOI Scopus58 WoS51 Europe PMC42
2010	de Montera, B., El Zeihery, D., Muller, S., Jammes, H., Brem, G., Reichenbach, H., . . . Hiendleder, S. (2010). Quantification of leukocyte genomic 5-methylcytosine levels reveals epigenetic plasticity in healthy adult cloned cattle. Cellular Reprogramming, 12(2), 175-181. DOI Scopus25 WoS19 Europe PMC12
2010	Novakovic, B., Wong, N., Sibson, M., Ng, H., Morley, R., Manuelpillai, U., . . . Saffery, R. (2010). DNA methylation-mediated Down-regulation of DNA methyltransferase-1 (DNMT1) is coincident with, but not essential for, global hypomethylation in human placenta. Journal of Biological Chemistry, 285(13), 9583-9593. DOI Scopus84 WoS71 Europe PMC69
2010	Lash, G., Burton, G., Chamley, L., Clifton, V., Constancia, M., Crocker, I., . . . Roberts, C. (2010). IFPA Meeting 2009 Workshops Report. Placenta, 31(Suppl), S4-S20. DOI Scopus11 WoS19 Europe PMC10
2010	Ng, H., Novakovic, B., Hiendleder, S., Craig, J., Roberts, C., & Saffery, R. (2010). Distinct patterns of gene-specific methylation in mammalian placentas: Implications for placental evolution and function. Placenta, 31(4), 259-268. DOI Scopus29 WoS23 Europe PMC22
2010	Ulbrich, S., Zitta, K., Hiendleder, S., & Wolf, E. (2010). In vitro systems for intercepting early embryo-maternal cross-talk in the bovine oviduct. Theriogenology, 73(6), 802-816. DOI Scopus61 WoS54 Europe PMC41
2009	Bovine Genome Sequencing and Analysis Consortium., Elsik, C., Tellam, R., & Worley, K. (2009). The genome sequence of Taurine cattle: a window to ruminant biology and evolution. Science, 324(5926), 522-528. DOI Scopus986 WoS885 Europe PMC762
2008	Hiendleder, S., Lewalski, H., & Janke, A. (2008). Complete mitochondrial genomes of Bos taurus and Bos indicus provide new insights into intraspecies variation taxonomy and domestication. Cytogenetic and Genome Research, 120(1-2), 150-156. DOI Scopus108 WoS86 Europe PMC79
2007	Hiendleder, S., Bebbere, D., Ulbrich, S. E., Zakhartchenko, V., Weppert, M., Reichenbach, H. -D., . . . Wolf, E. (2007). Evidence for a novel perturbation in cloned fetuses: Mitochondrial DNA depletion. REPRODUCTION FERTILITY AND DEVELOPMENT, 19(1), 216. DOI
2007	Bebbere, D., Ulbrich, S. E., Zakhartchenko, V., Weppert, M., Reichenbach, H. -D., Meyer, H. H. D., . . . Hiendleder, S. (2007). Phenotypic characteristics and tissue-specific <i>IGF2R/IGF2</i> expression partition bovine fetal overgrowth associated with <i>in vitro</i> fertilization and somatic cell nuclear transfer cloning. REPRODUCTION FERTILITY AND DEVELOPMENT, 19(1), 247. DOI WoS1
2007	Ulbrich, S. E., Gross, K., Schmidt, S., Blum, H., Rottmayer, R., Hiendleder, S., . . . Bauersachs, S. (2007). Does estradiol-17β cause cycle-dependent modulations of uterine milk protein in bovine endometrium?. REPRODUCTION FERTILITY AND DEVELOPMENT, 19(1), 202-203. DOI WoS1
2006	Wolf, E., Hiendleder, S., Bauersachs, S., Frohlich, T., Sinowatz, F., Blum, H., & Arnold, G. (2006). Methods for transcriptome and proteome research: applications for studying the biology of reproduction in cattle. Berliner und Munchener Tierarztliche Wochenschrift, 119(1-2), 7-16. Scopus4 WoS4 Europe PMC1
2006	Wolf, E., Arnold, G., Bauersachs, S., Blum, H., Frohlich, T., Hiendleder, S., . . . Reichenbach, H. (2006). Functional genome research - new strategies to improve fertility in cattle. Zuchtungskunde, 78(6), 428-439. Scopus2 WoS2
2006	Rottmayer, R., Ulbrich, S., Kolle, S., Prelle, K., Neumueller, C., Sinowatz, F., . . . Hiendleder, S. (2006). A bovine oviduct epithelial cell suspension culture system suitable for studying embryo-maternal interactions: morphological and functional characterization. Reproduction, 132(4), 637-648. DOI Scopus85 WoS73 Europe PMC57
2006	Hiendleder, S., Wirtz, M., Mund, C., Klempt, M., Reichenbach, H., Stojkovic, M., . . . Wolf, E. (2006). Tissue-specific effects of in vitro fertilization procedures on genomic cytosine methylation levels in overgrown and normal sized bovine fetuses. Biology of Reproduction, 75(1), 17-23. DOI Scopus64 WoS55 Europe PMC45
2006	Ulbrich, S., Rehfeld, S., Bauersachs, S., Wolf, E., Rottmayer, R., Hiendleder, S., . . . Einspanier, R. (2006). Region-specific expression of nitric oxide synthases in the bovine oviduct during the oestrous cycle and in vitro. Journal of Endocrinology, 188(2), 205-213. DOI Scopus23 WoS23 Europe PMC17
2005	Flisikowski, K., Hiendleder, S., & Zwierzchowski, L. (2005). Nucleotide Sequence Variation in the Transcription Factor STAT5A 5'-noncoding Region in Bos taurus and Bos indicus Cattle. Biochemical Genetics, 43(7-8), 459-464. DOI Scopus2 WoS2
2005	Hiendleder, S., Zakhartchenko, V., & Wolf, E. (2005). Mitochondria and the success of somatic cell nuclear transfer cloning: from nuclear–mitochondrial interactions to mitochondrial complementation and mitochondrial DNA recombination. Reproduction Fertility and Development, 17(2), 69-83. DOI Scopus47 WoS38 Europe PMC29
2005	Hiendleder, S., Bauersachs, S., Boulesteix, A., Blum, H., Arnold, G., Frohlich, T., & Wolf, E. (2005). Functional genomics: tools for improving farm animal health and welfare. Revue Scientifique et Technique de l Office International des Epizooties, 24(1), 355-377. DOI Scopus24 WoS20 Europe PMC8
2005	Flisikowski, K., Maj, A., Zwierzchowski, L., Adamowicz, T., Świtoński, M., Hiendleder, S., & Pareek, C. (2005). Nucleotide sequence and variation of IGF2 gene exon 6 in Bos taurus and Bos indicus cattle. Animal Biotechnology, 16(2), 203-208. DOI Scopus6 WoS6 Europe PMC4
2004	Hiendleder, S., Mund, C., Reichenbach, H., Wenigerkind, Z., Lyko, F., & Wolf, E. (2004). Tissue-specific elevated genomic cytosine methylation levels are associated with an overgrowth phenotype of bovine fetuses derived by in vitro techniques. Biology of Reproduction, 71(1), 217-223. DOI Scopus94 WoS82 Europe PMC67
2004	Hiendleder, S., Bebbere, D., Zakhartchenko, V., Reichenbach, H., Wenigerkind, H., Ledda, S., & Wolf, E. (2004). Maternal-fetal transplacental leakage of mitochondrial DNA in bovine nuclear transfer pregnancies: potential implications for offspring and recipients. Cloning and Stem Cells, 6(2), 150-156. DOI Scopus25 WoS23 Europe PMC20
2004	Tamassia, M., Nuttinck, F., May-Panloup, P., Reynier, P., Heyman, Y., Charpigny, G., . . . Chastant-Maillard, S. (2004). In vitro embryo production efficiency in cattle and its association with oocyte adenosine triphosphate content, quantity of mitochondrial DNA, and mitochondrial DNA haplogroup. Biology of Reproduction, 71(2), 697-704. DOI Scopus100 WoS89 Europe PMC79
2004	Hiendleder, S., Prelle, K., Bruggerhoff, K., Reichenbach, H., Wenigerkind, H., Bebbere, D., . . . Wolf, E. (2004). Nuclear-cytoplasmic interactions affect in utero developmental capacity, phenotype, and cellular metabolism of bovine nuclear transfer fetuses. Biology of Reproduction, 70(4), 1196-1205. DOI Scopus41 WoS34 Europe PMC23
2003	Bennewitz, J., Reinsch, N., Grohs, C., Leveziel, H., Malafosse, A., Thomsen, H., . . . Kalm, E. (2003). Combined analysis of data from two granddaughter designs: A simple strategy for QTL confirmation and increasing experimental power in dairy cattle. Genetics Selection Evolution, 35(3), 319-338. DOI Scopus73 WoS66 Europe PMC46
2003	Kuhn, C., Bennewitz, J., Reinsch, N., Xu, N., Thomsen, H., Looft, C., . . . Kalm, E. (2003). Quantitative trait loci mapping of functional traits in the German Holstein cattle population. Journal of Dairy Science, 86(1), 360-368. DOI Scopus142 WoS133 Europe PMC91
2003	Wolf, E., Arnold, G., Bauersachs, S., Beier, H., Blum, H., Einspanier, R., . . . Sinowatz, F. (2003). Embryo-Maternal Communication in Bovine – Strategies for Deciphering a Complex Cross-Talk. Reproduction in Domestic Animals, 38(4), 276-289. DOI Scopus151 WoS136 Europe PMC104
2003	Hiendleder, S., & Wolf, E. (2003). The mitochondrial genome in embryo technologies. Reproduction in Domestic Animals, 38(4), 290-304. DOI Scopus28 WoS23 Europe PMC17
2003	Hiendleder, S., Thomsen, H., Reinsch, N., Bennewitz, J., Leyhe-Horn, B., Looft, C., . . . Erhardt, G. (2003). Mapping of QTL for body conformation and behavior in cattle.. Journal of Heredity, 94(6), 496-506. DOI Scopus88 WoS73 Europe PMC46
2003	Hiendleder, S., Zakhartchenko, V., Wenigerkind, H., Reichenbach, H., Bruggerhoff, K., Prelle, K., . . . Wolf, E. (2003). Heteroplasmy in bovine fetuses produced by intra and inter subspecific somatic cell nuclear transfer: Neutral segregation of nuclear donor mitochondrial DNA in various tissues and evidence for recipient cow mitochondria in fetal blood.. Biology of Reproduction, 68(1), 159-166. DOI Scopus77 WoS70 Europe PMC55
2002	Bruggerhoff, K., Zakhartchenko, V., Wenigerkind, H., Reichenbach, H., Prelle, K., Schernthaner, W., . . . Wolf, E. (2002). Bovine somatic cell nuclear transfer using recipient oocytes recovered by ovum pick up. Effect of maternal lineage of oocyte donors.. Biology of Reproduction, 66(2), 367-373. DOI Scopus63 WoS54 Europe PMC42
2002	Hiendleder, S., Reiner, G., Gelderman, H., & Dzapo, V. (2002). SNPs in the porcine INHA gene and linkage mapping to SSC15. Animal Genetics, 33(3), 247-248. DOI Scopus9 WoS9 Europe PMC6
2002	Thomsen, H., Reinsch, N., Xu, N., Looft, C., Grupe, S., Kuhn, C., . . . Kalm, E. (2002). Mapping of the bovine blood group systems J, N', R', and Z show evidence for oligo-genetic inheritance. Animal Genetics, 33(2), 107-117. DOI Scopus6 WoS5 Europe PMC3
2002	Hiendleder, S., Kaupe, B., Wassmuth, R., & Janke, A. (2002). Molecular analysis of wild and domestic sheep questions current nomenclature and provides evidence for domestication from two different subspecies. Proceedings of the Royal Society of London Series B-Biological Sciences, 269(1494), 893-904. DOI Scopus233 WoS196 Europe PMC100
2001	Leyhe-Horn, B., Ziron, C., Prinzenberg, E. M., Barendse, W., Hiendleder, S., & Erhardt, G. (2001). Rapid communication: Mapping of Oxytocin (OXT) to the central region of bovine chromosome 13 by linkage analysis using SSCP. Journal of Animal Science, 79(3), 777-778. DOI Scopus1 WoS1
2001	Leyhe-Horn, B., Ziron, C., Prinzenberg, E., Barendse, W., Hiendleder, S., & Erhardt, G. (2001). Mapping of oxytocin (OXT) to the central region of bovine chromosome 13 by linkage analysis using SSCP. Journal of Animal Science, 79(3), 777-778.
2001	Thomsen, H., Reinsch, N., Xu, N., Looft, C., Grupe, S., Kuhn, C., . . . Kalm, E. (2001). Comparison of estimated breeding values, daughter yield deviations and de-regressed proofs within a whole genome scan for QTL. Journal of Animal Breeding and Genetics-zeitschrift fur Tierzuchtung und Zuchtungsbiologie, 118(6), 357-370. DOI Scopus42 WoS37
2001	Thomsen, H., Reinsch, N., Xu, N., Bennewitz, J., Looft, C., Grupe, S., . . . Kalm, E. (2001). A whole genome scan for differences in recombination rates among three Bos taurus breeds. Mammalian Genome, 12(9), 724-728. DOI Scopus13 WoS12 Europe PMC11
2001	Maddox, J., Davies, K., Crawford, A., Hulme, D., Vaiman, D., Cribiu, E., . . . van Hest, B. (2001). An enhanced linkage map of the sheep genome comprising more than 1000 loci. Genome Research, 11(7), 1275-1289. DOI Scopus223 WoS203 Europe PMC145
2001	Hiendleder, S., Janke, A., & Wassmuth, R. (2001). Molecular data on wild sheep genetic resources and domestic sheep evolution. Archiv fur Tierzucht-Archives of Animal Breeding, 44(SUPPL. 2), 271-279. Scopus1
2001	Wassmuth, R., Beuing, R., & Hiendleder, S. (2001). Some problems and perspectives of sheep breeding research. Archiv fur Tierzucht-Archives of Animal Breeding, 44(SUPPL. 2), 249-257. Scopus1
2001	Wassmuth, R., Hiendleder, S., Mendel, C., & Erhardt, G. (2001). Biochemical polymorphisms and major mtDNA haplotypes in Bergschaf breeds and Waldschaf as contribution to descent of domestic sheep. Journal of Animal Breeding and Genetics, 118(5), 327-340. DOI Scopus3 WoS3
2000	Lühken, G., Hiendleder, S., Prinzenberg, E. M., & Erhardt, G. (2000). Rapid communication: A single-strand conformation polymorphism in the ovine interleukin-2 (IL-2) gene. Journal of Animal Science, 78(10), 2754-2755. DOI Scopus6 WoS4 Europe PMC4
2000	Weimann, C., Hiendleder, S., Vaiman, D., & Erhardt, G. (2000). Rapid communication: genetic linkage mapping of a caprine microsatellite derived from a genomic clone containing the INHA gene.. Journal of Animal Science, 78(9), 2481-2482. DOI Scopus1 WoS1 Europe PMC1
2000	Hiendleder, S., Dodds, K. G., & Wassmuth, R. (2000). Linkage mapping of the ovine α-inhibin (INHA), β(A)-inhibin/activin (INHBA), and β(B)-inhibin/activin (INHBB) genes. Journal of Heredity, 91(4), 343-345. DOI Scopus5 WoS4 Europe PMC2
2000	Thomsen, H., Reinsch, N., Xu, N., Looft, C., Grupe, S., Kühn, C., . . . Kalm, E. (2000). A male bovine linkage map for the ADR granddaughter design. Journal of Animal Breeding and Genetics, 117(5), 289-306. DOI Scopus33 WoS32
1999	Lühken, G., Hiendleder, S., & Erhardt, G. (1999). Molecular characterization of the ovine interleukin 2 (IL-2) gene. Archiv fur Tierzucht, 42, 106-108.
1999	Reinsch, N., Thomsen, H., Xu, N., Brink, M., Looft, C., Kalm, E., . . . Averdunk, G. (1999). A QTL for the degree of spotting in cattle shows synteny with the KIT locus on chromosome 6. Journal of Heredity, 90(6), 629-634. DOI Scopus49 WoS44 Europe PMC24
1999	Hiendleder, S., Döring, C., Weimann, C., & Erhardt, G. (1999). Rapid Communication: Human Melanocortin Receptor Sequences Reveal a Sad Restriction Fragment Length Polymorphism at the Porcine Adrenocorticotropic Hormone Receptor (MC2R) Locus. Journal of Animal Science, 77(8), 2313-2314. DOI
1999	Hiendleder, S., Phua, S. H., & Hecht, W. (1999). A diagnostic assay discriminating between two major Ovis aries mitochondrial DNA haplogroups. Animal Genetics, 30(3), 211-213. DOI Scopus22 WoS15 Europe PMC3
1999	Hiendleder, S., Schmutz, S. M., Erhardt, G., Green, R. D., & Plante, Y. (1999). Transmitochondrial differences and varying levels of heteroplasmy in nuclear transfer cloned cattle. Molecular Reproduction and Development, 54(1), 24-31. DOI Scopus115 WoS105 Europe PMC79
1998	Hiendleder, S., Lewalski, H., Wassmuth, R., & Janke, A. (1998). The complete mitochondrial DNA sequence of the domestic sheep (Ovis aries) and comparison with the other major ovine haplotype. Journal of Molecular Evolution, 47(4), 441-448. DOI Scopus170 WoS147 Europe PMC94
1998	Hiendleder, S. (1998). A low rate of replacement substitutions in two major Ovis aries mitochondrial genomes. Animal Genetics, 29(2), 116-122. DOI Scopus24 WoS21 Europe PMC13
1998	Hiendleder, S., Mainz, K., Plante, Y., & Lewalski, H. (1998). Analysis of mitochondrial DNA indicates that domestic sheep are derived from two different ancestral maternal sources: No evidence for contributions from urial and argali sheep. Journal of Heredity, 89(2), 113-120. DOI Scopus215 WoS166 Europe PMC98
1998	Hiendleder, S. (1998). A divergent mitochondrial cytochrome b sequence in domestic sheep does not originate from Arkal (Ovis vignei arkal). Archiv Fur Tierzucht, 41(1-2), 123-128. Scopus1 WoS1
1997	Prinzenberg, E. M., Hiendleder, S., Ikonen, T., & Erhardt, G. (1997). Molecular genetic characterization of new bovine kappa-casein alleles CSN3(F) and CSN3(G) and genotyping by PCR-RFLP (vol 27, pg 347, 1996). ANIMAL GENETICS, 28(1), 72.
1997	Prinzenberg, E., Hiendleder, S., Ikonen, T., & Erhardt, G. (1997). Erratum: Molecular genetic characterization of new bovine kappa-casein alleles CSN3(F) and CSN3(G) and genotyping by PCR-RFLP (Animal Genetics (1996) 27: (347-349)). Animal Genetics, 28(1), 72.
1997	Prinzenberg, E. M., Hiendleder, S., & Erhardt, G. (1997). A trinucleotide repeat polymorphism is present in bovine CSN1S1. Animal Genetics, 28(5), 379-380. DOI Scopus2 Europe PMC1
1997	Hiendleder, S. (1997). Rapid communication: nucleotide sequence of ovine mitochondrial genes for tRNA glycine and cytochrome c-oxidase subunit III.. Journal of Animal Science, 75(8), 2284. DOI
1996	Prinzenberg, E. M., Hiendleder, S., Ikonen, T., & Erhardt, G. (1996). Molecular genetic characterization of new bovine kappa-casein alleles CSN3F and CSN3G and genotyping by PCR-RFLP. Animal Genetics, 27(5), 347-349. DOI Scopus30 WoS22 Europe PMC7
1996	Hiendleder, S., Weimann, C., Leyhe, B., Muller-Schlosser, F., & Erhardt, G. (1996). A PstI RFLP at the bovine INHBA locus. Animal Genetics, 27(3), 212. DOI
1996	Anastassiadis, C., Leyhe, B., Olsaker, I., Friedl, R., Rottmann, O., Hiendleder, S., & Erhardt, G. (1996). Three polymorphic microsatellites for bovine chromosomes 7, 12 and 19.. Animal Genetics, 27(2), 125-126. Scopus4 WoS5 Europe PMC2
1996	Hiendleder, S. (1996). Molecular characterization of the sheep mitochondrial genome. JOURNAL OF ANIMAL BREEDING AND GENETICS, 113(4-5), 293-302. DOI WoS9
1996	Hiendleder, S., Leyhe, B., Jaeger, C., Erhardt, G., & Wassmuth, R. (1996). Molecular characterization of ovine alpha-, beta(A)- and beta(B)-inhibin/activin alleles. JOURNAL OF ANIMAL BREEDING AND GENETICS, 113(4-5), 363-372. DOI WoS6
1995	Hiendleder, S., Herrmann, M., Dzapo, V., & Wassmuth, R. (1995). Mitochondrial respiratory metabolism and growth performance of lambs .1. Respiratory-chain enzyme activities. JOURNAL OF ANIMAL BREEDING AND GENETICS, 112(5-6), 373-380. WoS1
1995	Hiendleder, S., Herrmann, M., & Waßmuth, R. (1995). Mitochondrial respiratory metabolism and growth performance of lambs. II. Oxygen consumption and oxidative phosphorylation. Journal of Animal Breeding and Genetics, 112(1-6), 381-390. DOI Scopus5 WoS5
1995	Goldammer, T., Brunner, R. M., Hiendleder, S., & Schwerin, M. (1995). Comparative mapping of sheep inhibin subunits α (INHA) and βBINHBB to Chromosome 2 in goat by FISH. Mammalian Genome, 6(9), 685-686. DOI Scopus8 WoS7
1995	Weimann, C., Jäger, C., Grandke, R., & Hiendleder, S. (1995). A BglII polymorphism at the porcine INHBB locus. Animal Genetics, 26(3), 212. DOI Scopus1
1995	Goldammer, T., Brunner, R. M., Hiendleder, S., & Schwerin, M. (1995). Comparative mapping of sheep inhibin subunit βb to chromosome 2 in sheep and cattle by fluorescence in situ hybridization. Animal Genetics, 26(3), 199-200. DOI Scopus9 WoS11 Europe PMC4
1995	Hiendleder, S., Jannaber, U., Weimann, C., & Grandke, R. (1995). RFLP markers for the porcine INHA locus. Animal Genetics, 26(2), 131-132. DOI Scopus1 WoS2 Europe PMC2
1995	Hiendleder, S., Weimann, C., & Grandke, R. (1995). A TaqI RFLP at the bovine INHA locus. Animal Genetics, 26(2), 125. DOI WoS1
1995	Brunner, R. M., Goldammer, T., Hiendleder, S., Jäger, C., & Schwerin, M. (1995). Comparative mapping of the gene coding for Inhibin-α (INHA) to Chromosome 2 in sheep and cattle. Mammalian Genome, 6(4), 309. DOI Scopus4 WoS5 Europe PMC2
1995	Brunner, R. M., Goldammer, T., Hiendleder, S., Jäger, C., & Schwerin, M. (1995). Mapping of the gene encoding for Inhibin-βA (INHBA) to Chromosome 4q26 in sheep. Mammalian Genome, 6(4), 308-309. DOI Scopus6 WoS6 Europe PMC3
1995	WEIMANN, C., JAGER, C., GRANDKE, R., & HIENDLEDER, S. (1995). A BG/II POLYMORPHISM AT THE PORCINE INHBB LOCUS. ANIMAL GENETICS, 26(3), 212. WoS2
1995	Hiendleder, S. (1995). Sequence variation in the ovine cytochrome‐b gene. Journal of Animal Breeding and Genetics, 112(1-6), 75-80. DOI Scopus2 WoS4
1994	Leyhe, B., Hiendleder, S., Jaeger, C., & Wassmuth, R. (1994). Pronounced differences in the frequency of TaqI βA‐inhibin alleles between sheep breeds with different reproductive performance. Animal Genetics, 25(1), 41-43. DOI Scopus14 WoS13 Europe PMC5
1993	HIENDLEDER, S. (1993). DETAILED RESTRICTION MAP OF SHEEP MITOCHONDRIAL-DNA. ARCHIV FUR TIERZUCHT-ARCHIVES OF ANIMAL BREEDING, 36(5), 511-517. WoS4
1993	Schmahl, G., Leyhe, B., Hiendleder, S., & Wassmuth, R. (1993). An Eco RI polymorphism at the ovine enolase 1 (ENOl) locus. Animal Genetics, 24(1), 70. DOI Scopus1 WoS1
1992	Hiendleder, S., Jaeger, C., Leyhe, B., & Wassmuth, R. (1992). Mendelian inheritance of a Taq I polymorphism at the ovine βB‐Inhibin (INHBB) locus. Journal of Animal Breeding and Genetics, 109(1-6), 320. DOI Scopus3 WoS4
1992	HIENDLEDER, S., LEYHE, B., JAEGER, C., & WASSMUTH, R. (1992). A TaqI polymorphism at the ovine βA‐inhibin (INHBA) locus. Animal Genetics, 23(3), 291. DOI Scopus6 WoS7 Europe PMC2
1992	HIENDLEDER, S., HECHT, W., DZAPO, V., & WASSMUTH, R. (1992). Ovine mitochondrial DNA: restriction enzyme analysis, mapping and sequencing data. Animal Genetics, 23(2), 151-160. DOI Scopus13 WoS2 Europe PMC2
1991	Hiendleder, S., Hecht, W., & Wassmuth, R. (1991). Restriction enzyme analysis of cytoplasmic genetic variation in sheep. Journal of Animal Breeding and Genetics, 108(1-6), 290-298. DOI Scopus7 WoS10

Book Chapters

Year	Citation
2007	Hiendleder, S. (2007). Mitochondrial DNA Inheritance after SCNT. In P. Sutovsky (Ed.), Advances in experimental medicine and biology: somatic cell nuclear transfer (Vol. 591, pp. 103-116). LLC, 233 Spring St, New York, New York 10013, USA: Springer. DOI Scopus22 WoS20 Europe PMC14

Conference Papers

Year	Citation
2010	Burns, B. M., Herring, A. D., Laing, A., Fordyce, G., Bertram, J., Grant, T., & Hiendleder, S. (2010). Unrecognized variation in gestation length and birth weight of Droughtmaster calves produced through fixed-time AI. In M. C. Lucy, J. L. Pate, M. F. Smith, & T. E. Spencer (Eds.), REPRODUCTION IN DOMESTIC RUMINANTS VII Vol. 67 (pp. 585). Anchorage, AK: NOTTINGHAM UNIVERSITY PRESS.
2009	Kleemann, D., Kelly, J., Rudiger, S., Morrison, J., McMillen, I., Zhang, S., . . . Walker, S. (2009). Periconception nutrition: effects on gestation length, lamb survival, body and organ growth. In Y. Chilliard, F. Glasser, Y. Faulconnier, F. Bocquier, I. Veissier, & M. Doreau (Eds.), Ruminant physiology: Digestion, Metabolism and Effects of Nutrition on Reproduction and Welfare : Proceedings of the XIth International Symposium on Ruminant Physiology (pp. 746-747). France: Wageningen Academic Publishers.
2009	de Montera, B., El Zeihery, D., Mueller, S., Jammes, H., Brem, G., Reichenbach, H. -D., . . . Hiendleder, S. (2009). HIGHLY VARIABLE EPIGENOMES IN HEALTHY ADULT BOVINE CLONES. In REPRODUCTION FERTILITY AND DEVELOPMENT Vol. 21 (pp. 114). CSIRO PUBLISHING. DOI WoS1
2008	Richterich, P., Meerkamp, K., Hiendleder, S., Weppert, M., Reichenbach, H. D., Hoffmann, B., & Schuler, G. (2008). Expression of insulin-like growth factor (IGF) system components in bovine Placentomes from normal and LOS pregnancies. In REPRODUCTION IN DOMESTIC ANIMALS Vol. 43 (pp. 26-27). Gieben, GERMANY: WILEY-BLACKWELL.
2008	Fitzsimmons, C., Kruk, Z., Lines, D., Roberts, C., & Hiendleder, S. (2008). Identification of contrasted phenotypes in the bovine from repeated <i>in vivo</i> and <i>in vitro</i> embryo production following superovulation. In REPRODUCTION FERTILITY AND DEVELOPMENT Vol. 20 (pp. 131). CSIRO PUBLISHING. DOI WoS1
2007	Fitzsimmons, C., Kruk, Z., Lines, D., Feldmann, R., Truran, S., Bottema, C., . . . Hiendleder, S. (2007). Intrauterine development in a naturally occurring bovine large offspring model. In EARLY HUMAN DEVELOPMENT Vol. 83 (pp. S144). ELSEVIER IRELAND LTD. DOI
1991	WASSMUTH, R., GLAHNLUFT, B., ERHARDT, G., PASZTHY, G., HIENDLEDER, S., LEWALSKI, H., . . . KROGMEIER, D. (1991). BOOROOLA-F-GENE ACTIVITY REPORT. In J. M. ELSEN, L. BODIN, & J. THIMONIER (Eds.), MAJOR GENES FOR REPRODUCTION IN SHEEP Vol. 57 (pp. 53-55). TOULOUSE, FRANCE: INST NATL RECHERCHE AGRONOMIQUE.
1991	HIENDLEDER, S., ERHARDT, G., LEWALSKI, H., HERLINGER, D., GLAHNLUFT, B., & WASSMUTH, R. (1991). BIOCHEMICAL, MOLECULAR GENETIC AND CYTOGENETIC METHODS EMPLOYED TO CHARACTERIZE F-GENE CARRIERS AND NONCARRIERS. In J. M. ELSEN, L. BODIN, & J. THIMONIER (Eds.), MAJOR GENES FOR REPRODUCTION IN SHEEP Vol. 57 (pp. 281-287). TOULOUSE, FRANCE: INST NATL RECHERCHE AGRONOMIQUE.

Conference Items

Year	Citation
2016	Estrella, C. A. S., Kind, K. L., Ghanipoor-Samami, M., Javadmanesh, A., Roberts, C. T., & Hiendleder, S. (2016). Polar overdominance and maternal genome effects in placenta drive heterosis in utero. Poster session presented at the meeting of JOURNAL OF ANIMAL SCIENCE. OXFORD UNIV PRESS INC. DOI
2014	Xiang, R., Estrella, C. A., Fitzsimmons, C. J., Kruk, Z. A., Thomsen, D. A., Rutley, D. L., . . . Hiendleder, S. (2014). 97 magnitude and specificity of effects of maternal and paternal genomes on the feto-placental unit.. Poster session presented at the meeting of Reproduction, fertility, and development. Australia: CSIRO Publishing. DOI
2008	Krebs, S., Bauersachs, S., Reichenbach, H. D., Weppert, M., Hiendleder, S., Blum, H., & Wolf, E. (2008). Transcriptome analysis of bovine Day 150 fetal liver and cotyledon reveals genes involved in fetal growth. Poster session presented at the meeting of Proceedings of the Annual Conference of the International Embryo Transfer Society, Denver, Colorado, USA, 5-9 January 2008: Full Papers and Abstracts for Poster Presentation, as published in Reproduction, Fertility and Development. Denver, CO.: CSIRO Publishing. DOI WoS1

Datasets

Year	Citation
-	Ghanipoor-Samami, M., Javadmanesh, A., Burns, B., Thomsen, D., Nattrass, G., Estrella, C., . . . Hiendleder, S. (n.d.). Data Ghanipoor-Samami and Javadmanesh et al. for PLoS ONE 2018.xlsx. DOI

Past 10 years

Since 2018, ACLAM Foundation Grant 'MicroRNA’s as a Novel Laboratory Animal Welfare Assessment Tool' Whittaker A, Hiendleder S, Tilbrook A, Ralph C
Since 2017, APL Grant 'Novel biomarkers of animal welfare in pigs; MicroRNA, immunobiology and on farm application' Ralph C, Doyle R, Hazel S, Hiendleder S, Hutchinson M, Nattrass G, Plush K, Loup Ralut J, Tilbrook A
2014 - 2017, ARC Linkage, ‘Epigenetic modifications in bovid adaptation to environmental change' A Cooper, CM Suter, M Wilkinson, S Hiendleder, B Llamas, JR Stephen, JF Taylor, DH Densham
2011 - 2013, NHMRC, ‘Preventing insulin resistance and obesity following fetal growth restriction' JA Owens, M DeBlasio, K Gatford, S Hiendleder
2008 - 2012, Qld Government Reinvestment Fund, Department of Primary Industries and Fisheries ‘Precision beef cattle production through an alternative genetic approach' B Burns, S Hiendleder, A Herring
2007 - 2009, NHMRC, ‘Metabolic and molecular determinants of embryo viability' M Lane, S Hiendleder, M Mitchell
2006 - 2008, EU, 6th Framework Program, ‘Cutting Edge Genomics for Sustainable Animal Breeding' S Hiendleder, E Wolf
2006 - 2008, DFG, ‘Co-culture experiments for the study of early embryo-maternal communication' S Hiendleder, M Boelhauve

Teaching Interests

Genetics and Epigentics
Experimental Genetics
Conservation Genetics
Reproductive Biotechnology
Reproductive Physiology

Past Higher Degree by Research Supervision (University of Adelaide)

Date	Role	Research Topic	Program	Degree Type	Student Load	Student Name
2017 - 2022	Co-Supervisor	Exploration of microRNAs as biomarkers of affective state in the pig	Doctor of Philosophy	Doctorate	Full Time	Ms Laura Emma Marsh
2017 - 2022	Principal Supervisor	Effects of mitochondrial DNA haplotype on conceptus phenotype in cattle at midgestation	Doctor of Philosophy	Doctorate	Full Time	Mrs Hanh Thi Hong Nguyen
2016 - 2021	Co-Supervisor	Sex and Parental Genome Effects on Bovine Fetal Development	Doctor of Philosophy	Doctorate	Full Time	Ms Cynthia Liu
2014 - 2020	Principal Supervisor	Clinico-Chemical Parameters of Fetal Fluids and Maternal Blood in the Bovine Model: Effects of Genetics and Sex and Relationships with Feto-Placental Phenotype	Doctor of Philosophy	Doctorate	Full Time	Entesar Shuaib
2012 - 2016	Principal Supervisor	Effects of Fetal Sex and Genetics on the Bovine Placenta - From Baseline Data to Fetal Programming and Heterosis	Doctor of Philosophy	Doctorate	Full Time	Ms Consuelo Amor Estrella
2011 - 2015	Co-Supervisor	Omega-3 Fatty Acids in the Early Origins of Metabolic Syndrome	Doctor of Philosophy	Doctorate	Full Time	Miss Jing Zhou
2009 - 2014	Principal Supervisor	Differential maternal and paternal genome effects on placental and fetal phenotype and gene expression at midgestation	Doctor of Philosophy	Doctorate	Full Time	Mr Ruidong Xiang
2009 - 2014	Principal Supervisor	Contribution of insulin-like growth factor system and growth hormone-insulin-like growth factor 1 axis genes to heterosis in a bovine fetus model	Doctor of Philosophy	Doctorate	Full Time	Mr Ali Javadmanesh
2009 - 2013	Principal Supervisor	Imprinted Gene Expression and Phenotype of Bovine Concepti with Bos taurus and Bos indicus Genetics	Doctor of Philosophy	Doctorate	Full Time	Dr Mani Ghani Poor Samami

Memberships

Date	Role	Membership	Country
2006 - ongoing	Member	Society for Reproductive Biology (SRB)	Australia
2001 - ongoing	Member	International Embryo Technology Society (IETS)	United States
1996 - ongoing	Member	Deutsche Gesellschaft für Züchtungskunde e.V. (DGfZ)	Germany
1996 - ongoing	Member	Gesellschaft fuer Tierzuchtwissenschaft (GfT)	Germany
1990 - ongoing	Member	International Society for Animal Genetics (ISAG)	United States

Email: stefan.hiendleder@adelaide.edu.au