Dr Raymond Tobler
ARC DAATSIA Fellow
School of Biological Sciences
Faculty of Sciences
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Appointments
Date Position Institution name 2019 ARC DECRA Fellow University of Adelaide 2016 - 2019 ARC DAATSIA Fellow University of Adelaide -
Research Interests
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Journals
Year Citation 2020 Lan, D., Tobler, R., Souilmi, Y., & Llamas, B. (2020). genozip: a fast and efficient compression tool for VCF files. Bioinformatics, 36(13), 4091-4092.
Scopus12020 Teixeira, J., Jacobs, G., Stringer, C., Tuke, J., Hudjashov, G., Purnomo, G., . . . Helgen, K. (2020). Introgression, hominin dispersal and megafaunal survival in Late Pleistocene Island Southeast Asia.
2020 Souilmi, Y., Tobler, R., Johar, A., Williams, M., Grey, S., Schmidt, J., . . . Cooper, A. (2020). Ancient human genomes reveal a hidden history of strong selection in Eurasia.
2019 Richards, S., Mitchell, K., Tobler, R., & Cooper, A. (2019). Recombinase Polymerase Amplification (RPA) versus PCR for ancient DNA library amplification.
2019 Barghi, N., Tobler, R., Nolte, V., Jakšić, A. M., Mallard, F., Otte, K. A., . . . Schlötterer, C. (2019). Genetic redundancy fuels polygenic adaptation in Drosophila. PLoS Biology, 17(2), 31 pages.
Scopus33 WoS34 Europe PMC162018 Kofler, R., Senti, K. -A., Nolte, V., Tobler, R., & Schlötterer, C. (2018). Molecular dissection of a natural transposable element invasion.. Genome research, 28(6), 824-835.
Scopus10 WoS12 Europe PMC102018 Mallard, F., Nolte, V., Tobler, R., Kapun, M., & Schlötterer, C. (2018). A simple genetic basis of adaptation to a novel thermal environment results in complex metabolic rewiring in Drosophila. Genome Biology, 19(1), 119-1-119-15.
Scopus18 WoS20 Europe PMC92018 Rohrlach, A. B., Bean, N., Glonek, G., Holland, B., Tobler, R., Tuke, J., & Cooper, A. (2018). Unsupervized Quantification of Demographic Structure for Single-copy Alignments.
2018 Barghi, N., Tobler, R., Nolte, V., Jaksic, A. M., Mallard, F., Otte, K. A., . . . Schlöetterer, C. (2018). Polygenic adaptation fuels genetic redundancy in Drosophila.
Europe PMC22017 Mallard, F., Nolte, V., Tobler, R., Kapun, M., & Schlötterer, C. (2017). A simple genetic basis of adaptation to a novel thermal environment results in complex metabolic rewiring in Drosophila.
Europe PMC12017 Tobler, R., Rohrlach, A., Soubrier, J., Bover, P., Llamas, B., Tuke, J., . . . Cooper, A. (2017). Aboriginal mitogenomes reveal 50,000 years of regionalism in Australia. Nature, 544(7649), 180-184.
Scopus73 WoS68 Europe PMC252017 Barghi, N., Tobler, R., Nolte, V., & Schlötterer, C. (2017). Drosophila simulans: a species with improved resolution in evolve and resequence studies. G3: Genes, Genomes, Genetics, 7(7), 2337-2343.
Scopus11 WoS10 Europe PMC72017 Tobler, R., Nolte, V., & Schlötterer, C. (2017). High rate of translocation-based gene birth on the Drosophila Y chromosome. Proceedings of the National Academy of Sciences of the United States of America, 114(44), 11721-11726.
Scopus10 WoS11 Europe PMC52016 Schlötterer, C., Kofler, R., Versace, E., Tobler, R., & Franssen, S. U. (2016). Erratum: Combining experimental evolution with next-generation sequencing: A powerful tool to study adaptation from standing genetic variation (Heredity (2015) 114 (431-440)). Heredity, 116(2), 248.
Scopus2 WoS2 Europe PMC12016 Bergland, A. O., Tobler, R., González, J., Schmidt, P., & Petrov, D. (2016). Secondary contact and local adaptation contribute to genome-wide patterns of clinal variation in Drosophila melanogaster. Molecular Ecology, 25(5), 1157-1174.
Scopus57 WoS57 Europe PMC462016 Nouhaud, P., Tobler, R., Nolte, V., & Schlötterer, C. (2016). Ancestral population reconstitution from isofemale lines as a tool for experimental evolution. Ecology and Evolution, 6(20), 7169-7175.
Scopus10 WoS11 Europe PMC52015 Franssen, S. U., Nolte, V., Tobler, R., & Schlötterer, C. (2015). Patterns of linkage disequilibrium and long range hitchhiking in evolving experimental Drosophila melanogaster populations.. Molecular biology and evolution, 32(2), 495-509.
Scopus46 WoS48 Europe PMC372015 Tobler, R., Hermisson, J., & Schlötterer, C. (2015). Parallel trait adaptation across opposing thermal environments in experimental Drosophila melanogaster populations.. Evolution; international journal of organic evolution, 69(7), 1745-1759.
Scopus16 WoS18 Europe PMC102015 Schlötterer, C., Kofler, R., Versace, E., Tobler, R., & Franssen, S. (2015). Combining experimental evolution with next-generation sequencing: a powerful tool to study adaptation from standing genetic variation. Heredity, 114(5), 431-440.
Scopus96 WoS102 Europe PMC702014 Schlötterer, C., Tobler, R., Kofler, R., & Nolte, V. (2014). Sequencing pools of individuals - mining genome-wide polymorphism data without big funding.. Nature reviews. Genetics, 15(11), 749-763.
Scopus293 WoS303 Europe PMC2152014 Tobler, R., Franssen, S. U., Kofler, R., Orozco-Terwengel, P., Nolte, V., Hermisson, J., & Schlötterer, C. (2014). Massive habitat-specific genomic response in D. melanogaster populations during experimental evolution in hot and cold environments.. Molecular biology and evolution, 31(2), 364-375.
Scopus85 WoS88 Europe PMC632014 Versace, E., Nolte, V., Pandey, R. V., Tobler, R., & Schlötterer, C. (2014). Experimental evolution reveals habitat-specific fitness dynamics among Wolbachia clades in Drosophila melanogaster.. Molecular ecology, 23(4), 802-814.
Scopus22 WoS21 Europe PMC172014 Bergland, A., Tobler, R., Gonzalez, J., Schmidt, P., & Petrov, D. (2014). Secondary contact and local adaptation contribute to genome-wide patterns of clinal variation in Drosophila melanogaster.
2013 Bastide, H., Betancourt, A., Nolte, V., Tobler, R., Stöbe, P., Futschik, A., & Schlötterer, C. (2013). A Genome-Wide, Fine-Scale Map of Natural Pigmentation Variation in Drosophila melanogaster. PLoS Genetics, 9(6), 8 pages.
Scopus78 WoS75 Europe PMC562010 Tobler, R., Pledger, S., & Linklater, W. (2010). No evidence for ovarian synchrony or asynchrony in hamadryas baboons. ANIMAL BEHAVIOUR, 80(5), 829-837.
WoS7— Richards, S. M., Mitchell, K. J., Tobler, R., & Cooper, A. (n.d.). Recombinase Polymerase Amplification (RPA) versus PCR for ancient DNA library amplification.
— Souilmi, Y., Lauterbur, M. E., Tobler, R., Huber, C. D., Johar, A. S., & Enard, D. (n.d.). An ancient coronavirus-like epidemic drove adaptation in East Asians from 25,000 to 5,000 years ago.
— Tobler, R., Johar, A., Huber, C., & Souilmi, Y. (n.d.). PolyLinkR: A linkage-sensitive gene set enrichment R package.
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Current Higher Degree by Research Supervision (University of Adelaide)
Date Role Research Topic Program Degree Type Student Load Student Name 2019 Co-Supervisor Using Genomes to Unravel the Demographic and Evolutionary History of First Peoples of Sahul Master of Philosophy Master Full Time Mr Divon Mordechai Lan 2018 Co-Supervisor Reconstructing the Population History of Wallacea and Sahul Doctor of Philosophy Doctorate Full Time Mr Gludhug Ariyo Purnomo 2018 Co-Supervisor Using Pangenome-Graph to improve multiple population genetics inferences Doctor of Philosophy Doctorate Full Time Mr Adrien Oliva 2017 Co-Supervisor Paleo Population Genetic History of Australia and the Near East Doctor of Philosophy Doctorate Full Time Mr Matthew Williams
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