Dr Julien Soubrier

ARC Postdoctoral Research Associate

School of Biological Sciences

Faculty of Sciences

Career
Publications
Supervision
Contact

Appointments

Date	Position	Institution name
2016	Genome informatician	SA Pathology
2012 - 2016	ARC Research Associate	The University of Adelaide
2008 - 2009	Forensic technician	Institut National de Police Scientifique (INPS)

Language Competencies

Language Competency
English Can read, write, speak, understand spoken and peer review
French Can read, write, speak, understand spoken and peer review

Language	Competency
English	Can read, write, speak, understand spoken and peer review
French	Can read, write, speak, understand spoken and peer review

Education

Date	Institution name	Country	Title
2009 - 2012	The University of Adelaide	Australia	PhD
2006 - 2008	Claude Bernard University Lyon 1	France	Master's degree in Functional Genomics and Oncology
2004 - 2006	Claude Bernard University Lyon 1	France	Bachelor's degree in Biology of Organisms and Populations

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Journals

Year	Citation
2021	Leong, L. E. X., Soubrier, J., Turra, M., Denehy, E., Walters, L., Kassahn, K., . . . Lim, C. K. (2021). Whole-genome sequencing of sars-cov-2 from quarantine hotel outbreak. Emerging Infectious Diseases, 27(8), 2219-2221. DOI
2018	Feigin, C., Newton, A., Doronina, L., Schmitz, J., Hipsley, C., Mitchell, K., . . . Pask, A. (2018). Genome of the Tasmanian tiger provides insights into the evolution and demography of an extinct marsupial carnivore. Nature Ecology and Evolution, 2(1), 182-192. DOI Scopus36 WoS32 Europe PMC26
2017	Onar, V., Soubrier, J., Toker, N., van Loenen, A., Llamas, B., Siddiq, A., . . . Tokarska, M. (2017). Did the historical range of the European bison (Bison bonasus L.) extend further south? - a new finding from the Yenikapı Metro and Marmaray excavation, Turkey. Mammal Research, 62(1), 103-109. DOI Scopus2 WoS2
2017	Weyrich, L., Duchene, S., Soubrier, J., Arriola, L., Llamas, B., Breen, J., . . . Cooper, A. (2017). Neanderthal behaviour, diet, and disease inferred from ancient DNA in dental calculus. Nature, 544(7650), 357-361. DOI Scopus200 WoS182 Europe PMC92
2017	Tobler, R., Rohrlach, A., Soubrier, J., Bover Arbos, P., Llamas, B., Tuke, J., . . . Cooper, A. (2017). Aboriginal mitogenomes reveal 50,000 years of regionalism in Australia. Nature, 544(7649), 180-184. DOI Scopus88 WoS85 Europe PMC30
2016	Llamas, B., Fehren-Schmitz, L., Valverde, G., Soubrier, J., Mallick, S., Rohland, N., . . . Haak, W. (2016). Ancient mitochondrial DNA provides high-resolution time scale of the peopling of the Americas. Science Advances, 2(4), e1501385-1-e1501385-10. DOI Scopus175 WoS145 Europe PMC71
2016	Cruz-Dávalos, D. I., Llamas, B., Gaunitz, C., Fages, A., Gamba, C., Soubrier, J., . . . Orlando, L. (2016). Experimental conditions improving in-solution target enrichment for ancient DNA. Molecular Ecology Resources, 17(3), 508-522. DOI Scopus36 WoS29 Europe PMC17
2016	Soubrier, J., Gower, G., Chen, K., Richards, S., Llamas, B., Mitchell, K., . . . Cooper, A. (2016). Early cave art and ancient DNA record the origin of European bison. Nature Communications, 7(1), 13158-1-13158-7. DOI Scopus49 WoS46 Europe PMC16
2014	Clarke, L., Czechowski, P., Soubrier, J., Stevens, M., & Cooper, A. (2014). Modular tagging of amplicons using a single PCR for high-throughput sequencing. Molecular Ecology Resources, 14(1), 117-121. DOI Scopus24 WoS25 Europe PMC15
2014	Sheng, G., Soubrier, J., Liu, J., Werdelin, L., Llamas, B., Thomson, V., . . . Cooper, A. (2014). Pleistocene Chinese cave hyenas and the recent Eurasian history of the spotted hyena, Crocuta crocuta. Molecular Ecology, 23(3), 522-533. DOI Scopus25 WoS21 Europe PMC8
2014	Mitchell, K., Llamas, B., Soubrier, J., Rawlence, N., Worthy, T., Wood, J., . . . Cooper, A. (2014). Ancient DNA reveals elephant birds and kiwi are sister taxa and clarifies ratite bird evolution. Science, 344(6186), 898-900. DOI Scopus161 WoS152 Europe PMC80
2014	Der Sarkissian, C., Brotherton, P., Balanovsky, O., Templeton, J., Llamas, B., Soubrier, J., . . . Genographic Consortium. (2014). Mitochondrial genome sequencing in mesolithic North East Europe unearths a new sub-clade within the broadly distributed human haplogroup C1. PLoS One, 9(2), e87612-1-e87612-10. DOI Scopus14 WoS6 Europe PMC9
2014	Clarke, L., Soubrier, J., Weyrich, L., & Cooper, A. (2014). Environmental metabarcodes for insects: In silico PCR reveals potential for taxonomic bias. Molecular Ecology Resources, 14(6), 1160-1170. DOI Scopus162 WoS155 Europe PMC28
2013	Lee, M., Soubrier, J., & Edgecombe, G. (2013). Rates of phenotypic and genomic evolution during the Cambrian explosion. Current Biology, 23(19), 1889-1895. DOI Scopus97 WoS90 Europe PMC56
2013	Brotherton, P., Haak, W., Templeton, J., Soubrier, J., Adler, C., Richards, S., . . . Cooper, A. (2013). Neolithic mitochondrial haplogroup H genomes and the genetic origins of Europeans. Nature Communications, 4(1764), 1-11. DOI Scopus136 WoS130 Europe PMC78
2013	Austin, J., Soubrier, J., Prevosti, F., Prates, L., Trejo, V., Mena, F., & Cooper, A. (2013). The origins of the enigmatic Falkland Islands wolf. Nature Communications, 4(1), 1-7. DOI Scopus38 WoS29 Europe PMC8
2013	Templeton, J., Brotherton, P., Llamas, B., Soubrier, J., Haak, W., Cooper, A., & Austin, J. (2013). DNA capture and next-generation sequencing can recover whole mitochondrial genomes from highly degraded samples for human identification. Investigative Genetics, 4(26), 1-13. DOI Scopus71 Europe PMC34
2012	Soubrier, J., Steel, M., Lee, M., Dersarkissian, C., Guindon, S., Ho, S., & Cooper, A. (2012). The influence of rate heterogeneity among sites on the time dependence of molecular rates. Molecular Biology and Evolution, 29(11), 3345-3358. DOI Scopus99 WoS100 Europe PMC60
2011	Aplin, K., Suzuki, H., Chinen, A., Chesser, R., ten Have, J., Donnellan, S., . . . Cooper, A. (2011). Multiple geographic origins of commensalism and complex dispersal history of black rats. PLoS One, 6(11), 1-20. DOI Scopus175 WoS168 Europe PMC81
2011	Ho, S., Lanfear, R., Bromham, L., Phillips, M., Soubrier, J., Rodrigo, A., & Cooper, A. (2011). Time-dependent rates of molecular evolution. Molecular Ecology, 20(15), 3087-3101. DOI Scopus353 WoS342 Europe PMC240

Conference Items

Year	Citation
2019	Fletcher, J., Brion, K., Douglas, E., Dubowsky, A., Friend, K., Geoghagan, J., . . . Kassahn, K. (2019). Outcome of genomic testing in in South Australia: detection rate is not the same for all (virtual) panels. Poster session presented at the meeting of EUROPEAN JOURNAL OF HUMAN GENETICS. Gothenburg, SWEDEN: NATURE PUBLISHING GROUP.
2015	Miller, C., Franks, C., Breen, J., Weyrich, L., Soubrier, J., Llamas, B., . . . Cooper, A. (2015). Open access to ancient human DNA: An Australian Centre for Ancient DNA (ACAD) and University Libraries collaboration. Poster session presented at the meeting of Proceedings of eResearch Australasia 2016. Brisbane, Australia: eResearch Australasia.
2013	Haak, W., Brotherton, P., Templeton, J., Brandt, G., Soubrier, J., Adler, C. J., . . . Cooper, A. (2013). Neolithic human mitochondrial haplogroup H genomes and the genetic origins of Europeans. Poster session presented at the meeting of AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY. Knoxville, TN: WILEY-BLACKWELL.

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Past Higher Degree by Research Supervision (University of Adelaide)

Date	Role	Research Topic	Program	Degree Type	Student Load	Student Name
2013 - 2015	Co-Supervisor	Methodological Challenges To Study The Nuclear Evolutionary History Of An Ancient Bison Species	Master of Philosophy	Master	Full Time	Oliver Lomax-James Wooley

Position: ARC Postdoctoral Research Associate
Phone: 83135565
Email: julien.soubrier@adelaide.edu.au
Fax: 8313 4364
Campus: North Terrace
Building: Darling, floor 2
Room: 2 05c
Org Unit: Ecology and Evolutionary Biology

Dr Julien Soubrier

Appointments

Language Competencies

Education

Journals

Conference Items

Past Higher Degree by Research Supervision (University of Adelaide)

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