2024 |
Morton, M., Fiene, G., Ahmed, H. I., Rey, E., Abrouk, M., Angel, Y., . . . Julkowska, M. M. (2024). Deciphering salt stress responses in Solanum pimpinellifolium through high-throughput phenotyping. Plant Journal, 119(5), 2514-2537. DOI |
2023 |
Ngo, H. T. T., Cavagnaro, T. R., Jewell, N., Brien, C. J., Berger, B., & Watts-Williams, S. J. (2023). High-throughput shoot phenotyping reveals temporal growth responses to nitrogen and inorganic and organic phosphorus sources in tomato. AoB Plants, 15(2), plad011-1-plad011-11. DOI Scopus2 Europe PMC1 |
2023 |
Bicharanloo, B., Salomon, M. J., Cavagnaro, T. R., Keitel, C., Brien, C., Jewell, N., . . . Dijkstra, F. A. (2023). Arbuscular mycorrhizae are important for phosphorus uptake and root biomass, and exudation for nitrogen uptake in tomato plants grown under variable water conditions. Plant and Soil, 490(1-2), 325-342. DOI Scopus1 WoS1 |
2022 |
Watts-Fawkes, S., Gill, A. R., Jewell, N., Brien, C. J., Berger, B., Tran, B. T. T., . . . Cavagnaro, T. R. (2022). Enhancement of sorghum grain yield and nutrition: A role for arbuscular mycorrhizal fungi regardless of soil phosphorus availability. Plants, People, Planet, 4(2), 143-156. DOI Scopus16 WoS7 |
2022 |
Dunlevy, J. D., Blackmore, D. H., Betts, A., Jewell, N., Brien, C., Berger, B., . . . Walker, A. R. (2022). Investigating the effects of elevated temperature on salinity tolerance traits in grapevine rootstocks using high‐throughput phenotyping. Australian Journal of Grape and Wine Research, 28(2), 276-291. DOI Scopus6 WoS3 |
2022 |
Tanner, F., Tonn, S., de Wit, J., Van den Ackerveken, G., Berger, B., & Plett, D. (2022). Sensor-based phenotyping of above-ground plant-pathogen interactions.. Plant methods, 18(1), 18 pages. DOI Scopus19 WoS8 Europe PMC8 |
2022 |
Asif, M. A., Garcia, M., Tilbrook, J., Brien, C., Dowling, K., Berger, B., . . . Pearson, A. S. (2022). Corrigendum to: Identification of salt tolerance QTL in a wheat RIL mapping population using destructive and non-destructive phenotyping. Functional Plant Biology, 49(7), 672. DOI Scopus2 Europe PMC1 |
2022 |
Ball, K. R., Liu, H., Brien, C., Berger, B., Power, S. A., & Pendall, E. (2022). Hyperspectral imaging predicts yield and nitrogen content in grass-legume polycultures. PRECISION AGRICULTURE, 23(6), 2270-2288. DOI Scopus7 WoS2 |
2022 |
Lethin, J., Byrt, C., Berger, B., Brien, C., Jewell, N., Roy, S., . . . Aronsson, H. (2022). Improved Salinity Tolerance-Associated Variables Observed in EMS Mutagenized Wheat Lines. International Journal of Molecular Sciences, 23(19), 1-20. DOI Scopus3 WoS1 Europe PMC3 |
2022 |
Langridge, P., Alaux, M., Almeida, N. F., Ammar, K., Baum, M., Bekkaoui, F., . . . Zhang, X. (2022). Meeting the Challenges Facing Wheat Production: The Strategic Research Agenda of the Global Wheat Initiative. Agronomy, 12(11), 2767. DOI Scopus20 WoS3 |
2021 |
Ball, K. R., Woodin, S. J., Power, S. A., Brien, C., Berger, B., Smith, P., & Pendall, E. (2021). Integrating Ecological Stoichiometry to Understand Nutrient Limitation and Potential for Competition in Mixed Pasture Assemblages. Journal of Soil Science and Plant Nutrition, 21(3), 2489-2500. DOI Scopus4 WoS2 |
2021 |
Borjigin, C., Schilling, R. K., Jewell, N., Brien, C., Sanchez-Ferrero, J. C., Eckermann, P., . . . Roy, S. (2021). Identifying the genetic control of salinity tolerance in the bread wheat landrace Mocho de Espiga Branca. Functional Plant Biology, 48(11), 1148-1160. DOI Scopus10 WoS7 Europe PMC7 |
2021 |
Salomon, M. J., Watts-Williams, S. J., McLaughlin, M. J., Brien, C. J., Jewell, N., Berger, B., & Cavagnaro, T. R. (2021). Evaluation of commercial composts and potting mixes and their ability to support arbuscular mycorrhizal fungi with maize (Zea mays) as host plant.. Waste Manag, 134, 187-196. DOI Scopus6 WoS4 Europe PMC2 |
2021 |
Matros, A., Houston, K., Tucker, M. R., Schreiber, M., Berger, B., Aubert, M. K., . . . Burton, R. A. (2021). Genome-wide association study reveals the genetic complexity of fructan accumulation patterns in barley grain. Journal of Experimental Botany, 72(7), 2383-2402. DOI Scopus16 WoS8 Europe PMC12 |
2021 |
Tran, B. T. T., Cavagnaro, T. R., Jewell, N., Brien, C., Berger, B., & Watts‐Williams, S. J. (2021). High‐throughput phenotyping reveals growth of Medicago truncatula is positively affected by arbuscular mycorrhizal fungi even at high soil phosphorus availability. PLANTS, PEOPLE, PLANET, 3(5), 600-613. DOI Scopus8 WoS8 |
2021 |
Asif, M. A., Garcia, M., Tilbrook, J., Brien, C., Dowling, K., Berger, B., . . . Pearson, A. S. (2021). Identification of salt tolerance QTL in a wheat RIL mapping population using destructive and non-destructive phenotyping. Functional Plant Biology, 48(2), 131-140. DOI Scopus23 WoS14 Europe PMC11 |
2020 |
Konate, M., Wilkinson, M. J., Taylor, J., Scott, E. S., Berger, B., & Rodriguez Lopez, C. M. (2020). Greenhouse spatial effects detected in the barley (Hordeum vulgare L.) Epigenome underlie stochasticity of DNA methylation. Frontiers in Plant Science, 11, 553907-1-553907-15. DOI Scopus4 WoS3 Europe PMC2 |
2020 |
Ball, K. R., Power, S. A., Brien, C., Woodin, S., Jewell, N., Berger, B., & Pendall, E. (2020). High-throughput, image-based phenotyping reveals nutrient-dependent growth facilitation in a grass-legume mixture.. PLoS One, 15(10), 1-18. DOI Scopus9 WoS5 Europe PMC2 |
2020 |
Konate, M., Wilkinson, M., Taylor, J., Scott, E., Berger, B., & Rodriguez Lopez, C. M. (2020). Greenhouse spatial effects detected in the barley (<i>Hordeum vulgare</i>L.) epigenome underlie stochasticity of DNA methylation. DOI |
2020 |
Broad, R. C., Bonneau, J. P., Beasley, J. T., Roden, S., Sadowski, P., Jewell, N., . . . Johnson, A. A. T. (2020). Effect of Rice GDP-L-Galactose Phosphorylase Constitutive Overexpression on Ascorbate Concentration, Stress Tolerance, and Iron Bioavailability in Rice. Frontiers in Plant Science, 11, 1-13. DOI Scopus20 WoS11 Europe PMC12 |
2020 |
Brien, C., Jewell, N., Watts-Williams, S. J., Garnett, T., & Berger, B. (2020). Smoothing and extraction of traits in the growth analysis of noninvasive phenotypic data.. Plant Methods, 16(1), 1-21. DOI Scopus17 WoS15 Europe PMC7 |
2020 |
Matros, A., Houston, K., Tucker, M., Schreiber, M., Berger, B., Aubert, M., . . . Burton, R. (2020). GWAS reveals the genetic complexity of fructan accumulation patterns in barley grain. DOI Europe PMC1 |
2020 |
Borjigin, C., Schilling, R. K., Bose, J., Hrmova, M., Qiu, J., Wege, S., . . . Roy, S. J. (2020). A single nucleotide substitution in TaHKT1;5-D controls shoot Na⁺ accumulation in bread wheat. Plant, Cell and Environment, 43(9), 2158-2171. DOI Scopus16 WoS13 Europe PMC8 |
2020 |
Liu, H., Bruning, B., Garnett, T., & Berger, B. (2020). Hyperspectral imaging and 3D technologies for plant phenotyping: From satellite to close-range sensing. Computers and Electronics in Agriculture, 175, 13 pages. DOI Scopus76 WoS41 |
2020 |
Bruning, B., Berger, B., Lewis, M., Liu, H., & Garnett, T. (2020). Approaches, applications, and future directions for hyperspectral vegetation studies: An emphasis on yield‐limiting factors in wheat. The Plant Phenome Journal, 3(1), 22 pages. DOI Scopus28 |
2020 |
Saade, S., Brien, C., Pailles, Y., Berger, B., Shahid, M., Russell, J., . . . Tester, M. (2020). Dissecting new genetic components of salinity tolerance in two-row spring barley at the vegetative and reproductive stages. PloS one, 15(7), e0236037-1-e0236037-19. DOI Scopus24 WoS15 Europe PMC10 |
2020 |
Liu, H., Bruning, B., Garnett, T., & Berger, B. (2020). The performances of hyperspectral sensors for proximal sensing of nitrogen levels in wheat. Sensors (Switzerland), 20(16), 1-21. DOI Scopus20 WoS11 Europe PMC7 |
2019 |
Bruning, B., Liu, H., Brien, C., Berger, B., Lewis, M., & Garnett, T. (2019). The Development of Hyperspectral Distribution Maps to Predict the Content and Distribution of Nitrogen and Water in Wheat (Triticum aestivum).. Frontiers in plant science, 10, 1380. DOI Scopus56 WoS33 Europe PMC11 |
2019 |
Pham, A. T., Maurer, A., Pillen, K., Brien, C., Dowling, K., Berger, B., . . . March, T. J. (2019). Genome-wide association of barley plant growth under drought stress using a nested association mapping population. BMC Plant Biology, 19(1), 134-1-134-16. DOI Scopus65 WoS40 Europe PMC28 |
2019 |
Riley, R., Cavagnaro, T., Brien, C., Smith, F. A., Smith, S., Berger, B., . . . Powell, J. (2019). Resource allocation to growth or luxury consumption drives mycorrhizal responses. Ecology Letters, 22(11), 1757-1766. DOI Scopus31 WoS23 Europe PMC3 |
2019 |
Watts-Fawkes, S. J., Jewell, N., Brien, C., Berger, B., Garnett, T., & Cavagnaro, T. R. (2019). Using High-Throughput Phenotyping to Explore Growth Responses to Mycorrhizal Fungi and Zinc in Three Plant Species. Plant Phenomics, 2019, 5893953-1-5893953-12. DOI Scopus19 WoS16 Europe PMC4 |
2019 |
Ward, B., Brien, C., Oakey, H., Pearson, A., Negrão, S., Schilling, R. K., . . . Van Den Hengel, A. (2019). High‐throughput 3D modelling to dissect the genetic control of leaf elongation in barley (Hordeum vulgare). The Plant Journal, 98(3), 555-570. DOI Scopus18 WoS11 Europe PMC9 |
2018 |
Asif, M. A., Schilling, R. K., Tilbrook, J., Brien, C., Dowling, K., Rabie, H., . . . Pearson, A. S. (2018). Mapping of novel salt tolerance QTL in an Excalibur x Kukri doubled haploid wheat population. Theoretical and Applied Genetics, 131(10), 2179-2196. DOI Scopus59 WoS48 Europe PMC26 |
2018 |
Konate, M., Wilkinson, M., Mayne, B., Pederson, S., Scott, E., Berger, B., & Rodriguez Lopez, C. (2018). Salt Stress Induces Non-CG Methylation in Coding Regions of Barley Seedlings (Hordeum vulgare). Epigenomes, 2(2), 12. DOI Scopus21 WoS16 |
2018 |
Yichie, Y., Brien, C., Berger, B., Roberts, T., & Atwell, B. (2018). Salinity tolerance in Australian wild Oryza species varies widely and matches that observed in O. sativa. Rice, 11(1), 14 pages. DOI Scopus37 WoS30 Europe PMC17 |
2018 |
Konaté, M., Wilkinson, M. J., Mayne, B. T., Pederson, S. M., Scott, E. S., Berger, B., & Rodriguez Lopez, C. M. (2018). Salt Stress Induces Non-CG Methylation in Coding Regions of Barley Seedlings (Hordeum vulgare). Epigenomes, 2(2), 12. DOI |
2017 |
Meng, R., Saade, S., Kurtek, S., Berger, B., Brien, C., Pillen, K., . . . Sun, Y. (2017). Growth curve registration for evaluating salinity tolerance in barley. Plant Methods, 13(1), 18-1-18-9. DOI Scopus29 WoS23 Europe PMC10 |
2017 |
Atieno, J., Li, Y., Langridge, P., Dowling, K., Brien, C., Berger, B., . . . Sutton, T. (2017). Exploring genetic variation for salinity tolerance in chickpea using image-based phenotyping. Scientific Reports, 7(1), 11 pages. DOI Scopus96 WoS72 Europe PMC36 |
2017 |
Campbell, M., Du, Q., Liu, K., Brien, C., Berger, B., Zhang, C., & Walia, H. (2017). A comprehensive image-based phenomic analysis reveals the complex genetic architecture of shoot growth dynamics in rice (Oryza sativa). Plant Genome, 10(2), 1-14. DOI Scopus38 WoS27 Europe PMC22 |
2017 |
Tilbrook, J., Schilling, R., Berger, B., Garcia, A., Trittermann, C., Coventry, S., . . . Roy, S. (2017). Variation in shoot tolerance mechanisms not related to ion toxicity in barley. Functional Plant Biology, 44(12), 1194-1206. DOI Scopus21 WoS21 Europe PMC2 |
2017 |
Qiongyan, L., Cai, J., Berger, B., Okamoto, M., & Miklavcic, S. (2017). Detecting spikes of wheat plants using neural networks with Laws texture energy. Plant Methods, 13(1), 83-1-83-13. DOI Scopus67 WoS30 Europe PMC25 |
2016 |
Al-Tamimi, N., Brien, C., Oakey, H., Berger, B., Saade, S., Ho, Y., . . . Negrão, S. (2016). Salinity tolerance loci revealed in rice using high-throughput non-invasive phenotyping. Nature Communications, 7(1), 13342-1-13342-11. DOI Scopus184 WoS140 Europe PMC96 |
2015 |
Neilson, E., Edwards, A., Blomstedt, C., Berger, B., Møller, B., & Gleadow, R. (2015). Utilization of a high-throughput shoot imaging system to examine the dynamic phenotypic responses of a C₄ cereal crop plant to nitrogen and water deficiency over time. Journal of Experimental Botany, 66(7), 1817-1832. DOI Scopus159 WoS123 Europe PMC77 |
2015 |
Schmöckel, S., Garcia, A., Berger, B., Tester, M., Webb, A., & Roy, S. (2015). Different NaCl-induced calcium signatures in the arabidopsis thaliana ecotypes Col-0 and C24. PLoS One, 10(2), e0117564-1-e0117564-9. DOI Scopus19 WoS9 Europe PMC9 |
2015 |
Campbell, M., Knecht, A., Berger, B., Brien, C., Wang, D., & Walia, H. (2015). Integrating image-based phenomics and association analysis to dissect the genetic architecture of temporal salinity responses in rice. Plant Physiology, 168(4), 1476-1489. DOI Scopus130 WoS102 Europe PMC74 |
2015 |
Parent, B., Shahinnia, F., Maphosa, L., Berger, B., Rabie, H., Chalmers, K., . . . Fleury, D. (2015). Combining field performance with controlled environment plant imaging to identify the genetic control of growth and transpiration underlying yield response to water-deficit stress in wheat. Journal of Experimental Botany, 66(18), 5481-5492. DOI Scopus66 WoS50 Europe PMC23 |
2015 |
Takahashi, F., Tilbrook, J., Trittermann, C., Berger, B., Roy, S., Seki, M., . . . Tester, M. (2015). Comparison of leaf sheath transcriptome profiles with physiological traits of bread wheat cultivars under salinity stress. PLoS One, 10(8), e0133322-1-e0133322-23. DOI Scopus35 WoS31 Europe PMC14 |
2014 |
Hairmansis, A., Berger, B., Tester, M., & Roy, S. (2014). Image-based phenotyping for non-destructive screening of different salinity tolerance traits in rice. Rice, 7(1), 16-1-16-10. DOI Scopus150 WoS104 Europe PMC65 |
2014 |
Schilling, R., Marschner, P., Shavrukov, Y., Berger, B., Tester, M., Roy, S., & Plett, D. (2014). Expression of the Arabidopsis vacuolar H⁺-pyrophosphatase gene (AVP1) improves the shoot biomass of transgenic barley and increases grain yield in a saline field. Plant Biotechnology Journal, 12(3), 378-386. DOI Scopus129 WoS106 Europe PMC65 |
2014 |
Honsdorf, N., March, T., Berger, B., Tester, M., & Pillen, K. (2014). High-throughput phenotyping to detect drought tolerance QTL in wild barley introgression lines. PLoS One, 9(5), e97047-1-e97047-13. DOI Scopus207 WoS155 Europe PMC96 |
2014 |
Frerigmann, H., Berger, B., & Gigolashvili, T. (2014). bHLH05 is an interaction partner of MYB51 and a novel regulator of glucosinolate biosynthesis in arabidopsis. Plant Physiology, 166(1), 349-369. DOI Scopus85 WoS74 Europe PMC52 |
2013 |
Hayes, J., Pallotta, M., Baumann, U., Berger, B., Langridge, P., & Sutton, T. (2013). Germanium as a tool to dissect boron toxicity effects in barley and wheat. Functional Plant Biology, 40(6), 618-627. DOI Scopus24 WoS15 Europe PMC2 |
2013 |
Brien, C., Berger, B., Rabie, H., & Tester, M. (2013). Accounting for variation in designing greenhouse experiments with special reference to greenhouses containing plants on conveyor systems. Plant Methods, 9(1), 1-22. DOI Scopus44 WoS38 Europe PMC20 |
2011 |
golzarian, M., Frick, R., Rajendran, K., Berger, B., Roy, S., Tester, M., & Lun, D. (2011). Accurate inference of shoot biomass from high-throughput images of cereal plants. Plant Methods, 7(2), 1-11. DOI Scopus255 WoS204 Europe PMC100 |
2010 |
Berger, B., Parent, B., & Tester, M. (2010). High-throughput shoot imaging to study drought responses. Journal of Experimental Botany, 61(13), 3519-3528. DOI Scopus274 WoS205 Europe PMC97 |
2009 |
Gigolashvili, T., Berger, B., & Flugge, U. (2009). Specific and coordinated control of indolic and aliphatic glucosinolate biosynthesis by R2R3-MYB transcription factors in Arabidopsis thaliana. Phytochemistry Reviews: fundamentals and perspectives of natural products research, 8(1), 3-13. DOI Scopus117 WoS103 |
2008 |
Roy, S., Gilliham, M., Berger, B., Essah, P., Cheffings, C., Miller, A., . . . Tester, M. (2008). Investigating glutamate receptor-like gene co-expression in Arabidopsis thaliana. Plant Cell and Environment, 31(6), 861-871. DOI Scopus100 WoS86 Europe PMC59 |
2007 |
Gigolashvili, T., Yatusevich, R., Berger, B., Muller, C., & Flugge, U. (2007). The R2R3-MYB transcription factor HAG1/MYB28 is a regulator of methionine-derived glucosinolate biosynthesis in Arabidopsis thaliana. Plant Journal, 51(2), 247-261. DOI Scopus343 WoS323 Europe PMC224 |
2007 |
Gigolashvili, T., Berger, B., Mock, H., Muller, C., Weisshaar, B., & Flugge, U. (2007). The transcription factor HIG1/MYB51 regulates indolic glucosinolate biosynthesis in Arabidopsis thaliana. Plant Journal, 50(5), 886-901. DOI Scopus328 WoS309 Europe PMC220 |
2007 |
Berger, B., Stracke, R., Yatusevich, R., Weisshaar, B., Flugge, U., & Gigolashvili, T. (2007). A simplified method for the analysis of transcription factor-promoter interactions that allows high-throughput data generation. Plant Journal, 50(5), 911-916. DOI Scopus40 WoS40 Europe PMC33 |