| 2025 |
Lee Chang, K. J., Gorron Gomez, E., Ebrahimie, E., Dehcheshmeh, M. M., Frampton, D. M. F., & Zhou, X. -R. (2025). Transcriptomic Signature of Lipid Production in Australian Aurantiochytrium sp. TC20.. Mar Biotechnol (NY), 27(1), 43.
DOI |
| 2025 |
Grant, L., Mohammadi Dehcheshmeh, M., Ebrahimie, E., Khabiri, A., Veltman, T., Shipstone, M., & Trott, D. J. (2025). The effect of daily oral probiotic and postbiotic supplementation on the canine skin microbiota: Insights from culture-dependent and long-read 16S rRNA gene sequencing methods.. Veterinary dermatology, 36(5), 581-592.
DOI Scopus3 WoS3 Europe PMC2 |
| 2025 |
Lawless, C., Kovacs, K., Mohammadi Dehcheshmeh, M., Ebrahimie, E., Messele, Y. E., Snowball, M., . . . McLelland, D. J. (2025). Higher Dietary Fibre Increases the Faecal Microbiome Diversity of Golden Lion Tamarins (Leontopithecus rosalia). Animals, 15(13), 1831.
DOI |
| 2025 |
Pettett, L., Ebrahimie, E., Chinkangsadarn, T., Mohammadi Dehcheshmeh, M., Trott, D. J., & Bird, P. S. (2025). The Oral Microbiome in Queensland Free-Ranging Koalas (Phascolarctos cinereus) and Its Association with Age and Periodontal Disease. Animals, 15(13), 1834.
DOI |
| 2025 |
Mohammadi Dehcheshmeh, M., Grant, L., Ebrahimie, E., Khabiri, A., Hemmatzadeh, F., Shipstone, M., & Trott, D. J. (2025). Oral probiotic and postbiotic supplementation enhances the abundance of Lactobacillus acidophilus, Lactobacillus johnsonii, and Limosilactobacillus reuteri in both canine skin and gastrointestinal microbiota: insights from long-read 16S rRNA gene sequencing.. Vet Res Commun, 50(1), 29.
DOI |
| 2025 |
Hosseini, E., Razi, H., Tahmasebi, A., Alemzadeh, A., & Ebrahimie, E. (2025). Comparative transcriptomic and biochemical analyses reveal candidate regulatory genes associated with early drought response signatures in contrasting rapeseed (Brassica napus) cultivars.. Scientific reports.
DOI |
| 2024 |
Ranjbar, S., Emamjomeh, A., Ebrahimi, M., Ghorbani, A., Ebrahimie, E., & Shiri, Y. (2024). Comparative analysis of bioinformatic tools to predict and quantify active circular RNAs during grape cluster development. Biologia Plantarum, 68, 1-11.
DOI Scopus1 WoS1 |
| 2024 |
Li, J., Li, X. H., Ebrahimie, E., & Huang, L. (2024). Editorial: Exploring genetic characteristics and molecular mechanisms of host adaptation of viruses with artificial intelligence (AI) or (and) biological (BIO) approaches. Frontiers in Cellular and Infection Microbiology, 14, 3 pages.
DOI |
| 2024 |
Pashaei-Asl, R., Motaali, S., Ebrahimie, E., Mohammadi-Dehcheshmeh, M., Ebrahimi, M., & Pashaiasl, M. (2024). Delivery of doxorubicin by Fe<sub>3</sub>O<sub>4</sub> nanoparticles, reduces multidrug resistance gene expression in ovarian cancer cells.. Pathology, research and practice, 263, 155667.
DOI Scopus2 WoS2 Europe PMC1 |
| 2024 |
Ghasemi, E., Ebrahimie, E., & Niazi, A. (2024). Machine learning for early detection of plant viruses: Analyzing post-infection electrical signal patterns. Smart Agricultural Technology, 9, 13 pages.
DOI Scopus4 WoS4 |
| 2024 |
Missailidis, D., Ebrahimie, E., Dehcheshmeh, M. M., Allan, C., Sanislav, O., Fisher, P., . . . Annesley, S. J. (2024). A blood-based mRNA signature distinguishes people with Long COVID from recovered individuals. Frontiers in Immunology, 15, 1450853-1-1450853-12.
DOI Scopus7 WoS9 Europe PMC5 |
| 2024 |
Moghadam, A., Taghizadeh, M. S., Haghi, R., Tahmasebi, A., Niazi, A., & Ebrahimie, E. (2024). Exploring novel insights: Methyl jasmonate treatment reveals novel lncRNA-mediated regulation of secondary metabolite biosynthesis pathways in Echinacea purpurea. Food Bioscience, 57, 10 pages.
DOI Scopus30 WoS28 |
| 2024 |
Vassileff, N., Spiers, J. G., Lee, J. D., Woodruff, T. M., Ebrahimie, E., Mohammadi Dehcheshmeh, M., . . . Cheng, L. (2024). A Panel of miRNA Biomarkers Common to Serum and Brain-Derived Extracellular Vesicles Identified in Mouse Model of Amyotrophic Lateral Sclerosis. Molecular Neurobiology, 61(8), 5901-5915.
DOI Scopus6 WoS5 Europe PMC4 |
| 2024 |
Samandari-Bahraseman, M. R., Ismaili, A., Esmaeili-Mahani, S., Ebrahimie, E., & Loit, E. (2024). Bunium persicum Seeds Extract in Combination with Vincristine Mediates Apoptosis in MCF-7 Cells through Regulation of Involved Genes and Proteins Expression. Anti Cancer Agents in Medicinal Chemistry, 24(3), 213-223.
DOI Scopus4 WoS4 Europe PMC4 |
| 2024 |
Zhao, K., Ebrahimie, E., Mohammadi-Dehcheshmeh, M., Lewsey, M. G., Zheng, L., & Hoogenraad, N. J. (2024). Transcriptomic signature of cancer cachexia by integration of machine learning, literature mining and meta-analysis.. Computers in biology and medicine, 172, 108233.
DOI Scopus4 Europe PMC4 |
| 2024 |
Tabatabeipour, S. N., Shiran, B., Ravash, R., Niazi, A., & Ebrahimie, E. (2024). Meta-analysis of RNA-seq data of the medicinal plant Catharanthus roseus under some biotic and abiotic stresses. Agricultural Biotechnology Journal, 16(1), 209-234.
DOI |
| 2024 |
Tabatabaeipour, S. N., Shiran, B., Ravash, R., Niazi, A., & Ebrahimie, E. (2024). Comprehensive transcriptomic meta-analysis unveils new responsive genes to methyl jasmonate and ethylene in Catharanthus roseus. Heliyon, 10(5), 19 pages.
DOI Scopus7 WoS5 Europe PMC3 |
| 2023 |
Shamloo-Dashtpagerdi, R., Razi, H., Alemzadeh, A., & Ebrahimie, E. (2023). Further insights into the association of the protein phosphatase gene ABI1 with drought and salinity stress responses in Brassica species. Journal of Plant Biochemistry and Biotechnology, 32(1), 106-120.
DOI Scopus4 WoS4 |
| 2023 |
Neisi, M., Fakheri, B. A., Ebrahimie, E., Emamjomeh, A., Zahiri, J., & Parvizi Almani, M. (2023). RNA-Seq analyzing reveals the key role of SVR3 gene in tolerating the freezing stress in Saccharum spontaneum. Journal of Plant Growth Regulation, 42(4), 2613-2625.
DOI |
| 2023 |
Shariatzadeh, M., Karami, A., Moghadam, A., Lotfi, M., Maggi, F., & Ebrahimie, E. (2023). The Essential Oil from Oliveria decumbens Vent. (Apiaceae) as Inhibitor of Breast Cancer Cell (MCF-7) Growth. Pharmaceuticals, 16(1), 59.
DOI Scopus6 WoS4 Europe PMC2 |
| 2023 |
Homer, B., Judd, J., Mohammadi Dehcheshmeh, M., Ebrahimie, E., & Trott, D. J. (2023). Gut Microbiota and Behavioural Issues in Production, Performance, and Companion Animals: A Systematic Review. Animals, 13(9), 1458.
DOI Scopus24 WoS20 Europe PMC20 |
| 2023 |
Pezeshkian, Z., Mirhoseini, S. Z., Ghovvati, S., & Ebrahimie, E. (2023). Phenotypic evaluation of feed efficiency, growth and carcass traits inative turkeys. Journal of Central European Agriculture, 24(1), 85-94.
DOI Scopus2 WoS2 |
| 2023 |
Esmaeili, F., Farhadpour, M., Abbas-Mohammadi, M., Alilou, M., Morshedi, D., Ebrahimie, E., & Lohrasebi, T. (2023). Appraisals on the anticancer properties of Mentha species using bioassays and docking studies. Industrial Crops and Products, 203, 13 pages.
DOI Scopus5 WoS2 |
| 2023 |
Pashaei-Asl, R., Pashaiasl, M., Ebrahimie, E., Lale Ataei, M., & Paknejad, M. (2023). Apoptotic effects of human amniotic fluid mesenchymal stem cells conditioned medium on human MCF-7 breast cancer cell line. Bioimpacts, 13(3), 191-206.
DOI Scopus8 WoS7 |
| 2023 |
Piryaei, Z., Salehi, Z., Ebrahimie, E., Ebrahimi, M., & Kavousi, K. (2023). Meta-analysis of integrated ChIP-seq and transcriptome data revealed genomic regions affected by estrogen receptor alpha in breast cancer. BMC Medical Genomics, 16(1), 19 pages.
DOI Scopus3 WoS3 Europe PMC3 |
| 2023 |
Esfahani, E. D., Ebrahimie, E., Niazi, A., & Dehcheshmeh, M. M. (2023). Pattern discovery of long non-coding RNAs associated with the herbal treatments in breast and prostate cancers. Quantitative Biology, 11(3), 343-358.
DOI |
| 2023 |
Hazi, A., Ebrahimie, E., Levay, E. A., Mohammadi-Dehcheshmeh, M., Zelko, M., Govic, A., & Nasser, H. (2023). Crosstalk between short- and long-term calorie restriction transcriptomic signatures with anxiety-like behavior, aging, and neurodegeneration: implications for drug repurposing.. Front Behav Neurosci, 17, 1257881.
DOI Scopus1 WoS1 |
| 2023 |
Nezamivand-Chegini, M., Metzger, S., Moghadam, A., Tahmasebi, A., Koprivova, A., Eshghi, S., . . . Ebrahimie, E. (2023). Integration of transcriptomic and metabolomic analyses provides insights into response mechanisms to nitrogen and phosphorus deficiencies in soybean. Plant Science an International Journal of Experimental Plant Biology, 326, 111498.
DOI Scopus19 WoS17 Europe PMC7 |
| 2022 |
Govic, A., Nasser, H., Levay, E. A., Zelko, M., Ebrahimie, E., Mohammadi Dehcheshmeh, M., . . . Hazi, A. (2022). Long-Term Calorie Restriction Alters Anxiety-like Behaviour and the Brain and Adrenal Gland Transcriptomes of the Ageing Male Rat. Nutrients, 14(21), 1-18.
DOI Scopus16 WoS15 Europe PMC16 |
| 2022 |
Shojaee, S., Ravash, R., Shiran, B., & Ebrahimie, E. (2022). Meta-analysis highlights the key drought responsive genes in genes: PEPC and TaSAG7 are hubs response networks. Journal of Genetic Engineering and Biotechnology, 20(1), 18 pages.
DOI Scopus5 WoS4 Europe PMC2 |
| 2022 |
Piryaei, Z., Salehi, Z., Tahsili, M. R., Ebrahimie, E., Ebrahimi, M., & Kavousi, K. (2022). Agonist/antagonist compounds' mechanism of action on estrogen receptor-positive breast cancer: A system-level investigation assisted by meta-analysis. Informatics in Medicine Unlocked, 31, 100985.
DOI Scopus4 |
| 2022 |
Mondol, R. K., Truong, N. D., Reza, M., Ippolito, S., Ebrahimie, E., & Kavehei, O. (2022). AFExNet: An Adversarial Autoencoder for Differentiating Breast Cancer Sub-Types and Extracting Biologically Relevant Genes. IEEE ACM Transactions on Computational Biology and Bioinformatics, 19(4), 2060-2070.
DOI Scopus9 WoS7 Europe PMC3 |
| 2022 |
Xie, S., Trott, D. J., Saputra, S., Ebrahimie, E., Mohammadi Dehcheshmeh, M., Page, C., . . . Govendir, M. (2022). Pharmacokinetic profile and effect on the faecal microbiome of a single dose of pradofloxacin oral suspension in the rabbit (Oryctolagus cuniculus). Journal of Veterinary Pharmacology and Therapeutics, 45(2), 203-212.
DOI Scopus4 WoS4 Europe PMC4 |
| 2022 |
Sharifi, S., Shahreza, M. L., Pakdel, A., Reecy, J. M., Ghadiri, N., Atashi, H., . . . Ebrahimie, E. (2022). Systems biology–derived genetic signatures of mastitis in dairy cattle: A new avenue for drug repurposing. Animals, 12(1), 11 pages.
DOI Scopus6 WoS6 Europe PMC5 |
| 2022 |
Dorostkar, S., Dadkhodaie, A., Ebrahimie, E., Heidari, B., & Ahmadi-Kordshooli, M. (2022). Comparative transcriptome analysis of two contrasting resistant and susceptible Aegilops tauschii accessions to wheat leaf rust (Puccinia triticina) using RNA-sequencing. Scientific Reports, 12(1), 19 pages.
DOI Scopus21 WoS20 Europe PMC14 |
| 2022 |
Ghasemi, E., Ebrahimi, M., & Ebrahimie, E. (2022). Machine learning models effectively distinguish attention-deficit/hyperactivity disorder using event-related potentials. Cognitive Neurodynamics, 16(6), 1335-1349.
DOI Scopus21 WoS13 Europe PMC5 |
| 2022 |
Shakoori, Z., Pashaei-Asl, R., Pashaiasl, M., Davaran, S., Ghanbari, H., Ebrahimie, E., & Rezayat, S. M. (2022). Biocompatibility study of P (N-isopropylacrylamide)-based nanocomposite and its cytotoxic effect on HeLa cells as a drug delivery system for Cisplatin. Journal of Drug Delivery Science and Technology, 71, 11 pages.
DOI Scopus5 WoS5 |
| 2022 |
Alanazi, I. O., Alamery, S. F., Ebrahimie, E., & Mohammadi-Dehcheshmeh, M. (2022). Splice-disrupt genomic variants in prostate cancer. Molecular Biology Reports, 49(6), 4237-4246.
DOI Scopus5 WoS3 Europe PMC3 |
| 2022 |
Nezamivand-Chegini, M., Metzger, S., Moghadam, A., Tahmasebi, A., Koprivova, A., Eshghi, S., . . . Ebrahimie, E. (2022). Nitrogen and phosphorus deficiencies alter primary and secondary metabolites of soybean roots.
DOI |
| 2022 |
Pezeshkian, Z., Mirhoseini, S. Z., Ghovvati, S., & Ebrahimie, E. (2022). Transcriptome Analysis of Breast Muscle Reveals Pathways Related to Protein Deposition in High Feed Efficiency of Native Turkeys. Animals, 12(10), 20 pages.
DOI Scopus7 WoS6 Europe PMC5 |
| 2021 |
Nezamivand-Chegini, M., Ebrahimie, E., Tahmasebi, A., Moghadam, A., Eshghi, S., Mohammadi-Dehchesmeh, M., . . . Niazi, A. (2021). New insights into the evolution of SPX gene family from algae to legumes; a focus on soybean. BMC Genomics, 22(1), 21 pages.
DOI Scopus13 WoS12 Europe PMC10 |
| 2021 |
Tabrizi, A. E., Tahmoorespur, M., & Ebrahimie, E. (2021). Resensitizing resistant Escherichia Coli ST131 to Macrolide using Fluoroquinolones. Journal of Advanced Pharmacy Education and Research, 11(4), 29-34.
DOI |
| 2021 |
Ahsan, R., Tahsili, M. R., Ebrahimi, F., Ebrahimie, E., & Ebrahimi, M. (2021). Image processing unravels the evolutionary pattern of SARS-CoV-2 against SARS and MERS through position-based pattern recognition. Computers in Biology and Medicine, 134, 11 pages.
DOI Scopus5 WoS3 Europe PMC1 |
| 2021 |
Ebrahimie, E., Mohammadi-Dehcheshmeh, M., Laven, R., & Petrovski, K. (2021). Rule Discovery in Milk Content towards Mastitis Diagnosis: Dealing with Farm Heterogeneity over Multiple Years through Classification Based on Associations. Animals, 11(6), 1-13.
DOI Scopus13 WoS10 Europe PMC7 |
| 2021 |
Panahi, R., Ebrahimie, E., Niazi, A., & Afsharifar, A. (2021). Integration of meta-analysis and supervised machine learning for pattern recognition in breast cancer using epigenetic data. Informatics in Medicine Unlocked, 24, 100629.
DOI Scopus13 |
| 2021 |
Ghabeshi, S., Ebrahimie, E., Yavarian, J., Salimi, V., Shafiei-Jandaghi, N. Z., Rezaie, F., . . . Azad, T. M. (2021). Molecular characterization of low pathogenic avian influenza H9N2 virus during co-circulation with newly-emerged highly pathogenic avian influenza H5N8 virus in Iran. Acta Virologica, 65(2), 200-211.
DOI |
| 2021 |
Kharrati-Koopaee, H., Ebrahimie, E., Dadpasand, M., Niazi, A., Tian, R., & Esmailizadeh, A. (2021). Gene network analysis to determine the effect of hypoxia-associated genes on brain damages and tumorigenesis using an avian model. Journal of Genetic Engineering and Biotechnology, 19(1), 24 pages.
DOI Scopus4 WoS4 Europe PMC4 |
| 2021 |
Sahranavardfard, P., Madjd, Z., Razavi, A. E., Ghanadan, A., Firouzi, J., Khosravani, P., . . . Ebrahimi, M. (2021). An integrative analysis of the micro-RNAs contributing in stemness, metastasis and B-Raf pathways in malignant melanoma and melanoma stem cell. Cell Journal, 23(3), 261-272.
DOI Scopus6 WoS5 Europe PMC6 |
| 2021 |
Yip, S., Mohammadi Dehcheshmeh, M., McLelland, D. J., Boardman, W. S. J., Saputra, S., Ebrahimie, E., . . . Trott, D. J. (2021). Porphyromonas spp., Fusobacterium spp., and Bacteroides spp. dominate microbiota in the course of macropod progressive periodontal disease. Scientific reports, 11(1), 17775-1-17775-10.
DOI Scopus21 WoS17 Europe PMC13 |
| 2021 |
Ebrahimie, E., Zamansani, F., Alanazi, I. O., Sabi, E. M., Khazandi, M., Ebrahimi, F., . . . Ebrahimi, M. (2021). Advances in understanding the specificity function of transporters by machine learning. Computers in Biology and Medicine, 138(104893), 1-8.
DOI Scopus11 WoS11 Europe PMC6 |
| 2021 |
Ataei, M. L., Karimipour, M., Shahabi, P., Pashaei-Asl, R., Ebrahimie, E., & Pashaiasl, M. (2021). The restorative effect of human amniotic fluid stem cells on spinal cord injury. Cells, 10(10), 15 pages.
DOI Scopus6 WoS7 Europe PMC6 |
| 2021 |
Esmaeili, F., Lohrasebi, T., Mohammadi-Dehcheshmeh, M., & Ebrahimie, E. (2021). Evaluation of the effectiveness of herbal components based on their regulatory signature on carcinogenic cancer cells. Cells, 10(11), 3139.
DOI Scopus6 WoS5 Europe PMC5 |
| 2021 |
Ebrahimie, E., Rahimirad, S., Tahsili, M., & Mohammadi Dehcheshmeh, M. (2021). Alternative RNA splicing in stem cells and cancer stem cells: Importance of transcript-based expression analysis.. World J Stem Cells, 13(10), 1394-1416.
DOI Scopus8 WoS8 Europe PMC6 |
| 2021 |
Liyaghatdar, Z., Pezeshkian, Z., Mohammadi Dehcheshmeh, M., & Ebrahimie, E. (2021). Fast school closures correspond with a lower rate of COVID-19 incidence and deaths in most countries. Informatics in Medicine Unlocked, 27, 100805-1-100805-6.
DOI Scopus4 Europe PMC2 |
| 2021 |
Tabrizi, A. E., Tahmoorespur, M., & Ebrahimie, E. (2021). ABC Transporters are Hub Genes in Response of Resistant E. Coli ST131 to Ciprofloxacin. ARCHIVES OF PHARMACY PRACTICE, 12(3), 82-88.
DOI WoS2 |
| 2021 |
Hemmatzadeh, F., Sumarningsih, S., Tarigan, S., Indriani, R., Dharmayanti, N. L. P., & Ebrahimie, E. (2021). Expression of Concern: Recombinant M2e Protein-Based ELISA: A Novel and Inexpensive Approach for Differentiating Avian Influenza Infected Chickens from Vaccinated Ones. PLOS ONE, 16(4), 2 pages.
DOI |
| 2021 |
Ansari, E., Karami, A., & Ebrahimie, E. (2021). Isolation of 2-phenylethanol biosynthesis related gene and developmental patterns of emission of scent compounds in Persian musk rose (Rosa moschata Herrm.) (vol 19C. 101176, 2019). BIOCATALYSIS AND AGRICULTURAL BIOTECHNOLOGY, 31, 1 page. |
| 2021 |
Saedi, S., Jafarzadeh Shirazi, M. R., Niazi, A., Tahmasebi, A., & Ebrahimie, E. (2021). Prepubertal exposure to a high dose of cadmium induces hypothalamic injury through transcriptome profiling alteration and neuronal degeneration in female rats. Chemico-Biological Interactions, 337, 1-15.
DOI Scopus9 WoS8 Europe PMC7 |
| 2021 |
Hickey, T. E., Selth, L. A., Chia, K. M., Laven-Law, G., Milioli, H. H., Roden, D., . . . Tilley, W. D. (2021). The androgen receptor is a tumor suppressor in estrogen receptor-positive breast cancer. Nature Medicine, 27(2), 310-320.
DOI Scopus186 WoS181 Europe PMC165 |
| 2021 |
Mohammadi-Dehcheshmeh, M., Moghbeli, S. M., Rahimirad, S., Alanazi, I. O., Shehri, Z. S. A., & Ebrahimie, E. (2021). A Transcription Regulatory Sequence in the 5' Untranslated Region of SARS-CoV-2 Is Vital for Virus Replication with an Altered Evolutionary Pattern against Human Inhibitory MicroRNAs.. Cells, 10(2), 319.
DOI Scopus26 WoS24 Europe PMC31 |
| 2021 |
Farhadi, S., Ghias, J. S., Hasanpur, K., Mohammadi, S. A., & Ebrahimie, E. (2021). Molecular mechanisms of fat deposition: IL-6 is a hub gene in fat lipolysis, comparing thin-tailed with fat-tailed sheep breeds. Archives Animal Breeding, 64(1), 53-68.
DOI Scopus15 WoS14 Europe PMC14 |
| 2020 |
Farhadian, M., Rafat, S. A., Panahi, B., & Ebrahimie, E. (2020). Transcriptome signature of two lactation stages in Ghezel sheep identifies using RNA-Sequencing.. Animal Biotechnology, 33(2), 223-233.
DOI Scopus13 WoS13 Europe PMC14 |
| 2020 |
Ghabeshi, S., Ebrahimie, E., Salimi, V., Ghanizadeh, A., Khodakhah, F., Yavarian, J., . . . Azad, T. M. (2020). Experimental direct-contact transmission of influenza A/H9N2 virus in the guinea pig model in Iran. Future Virology, 15(5), 277-292.
DOI WoS1 |
| 2020 |
Rafiepour, M., Ebrahimie, E., Vahidi, M. F., Salekdeh, G. H., Niazi, A., Dadpasand, M., . . . Qanbari, S. (2020). Whole genome re-sequencing reveals adaptation prior to the divergence of buffalo subspecies.. Genome biology and evolution, 13(1), 1-14.
DOI Scopus14 WoS13 Europe PMC12 |
| 2020 |
Sharifi, S., Pakdel, A., Jahanbakhsh, J., Aryan, Y., Mahdavi, A., & Ebrahimie, E. (2020). Molecular mechanisms of resistance to bovine mastitis. Livestock Science, 239(article no. 104068), 1-5.
DOI Scopus6 WoS5 |
| 2020 |
Khelghatibana, F., Javan-Nikkhah, M., Safaie, N., Fotouhifar, K. B., Vahdati, K., & Ebrahimie, E. (2020). Comparative study of virulence of ophiognomonia leptostyla. Journal of Crop Protection, 9(2), 307-318. |
| 2020 |
Butcher, R. G., Pettett, L. M., Fabijan, J., Ebrahimie, E., Mohammadi-Dehcheshmeh, M., Speight, K. N., . . . Trott, D. J. (2020). Periodontal disease in free-ranging koalas (Phascolarctos cinereus) from the Mount Lofty Ranges, South Australia, and its association with koala retrovirus infection.. Australian veterinary journal, 98(5), 200-206.
DOI Scopus11 WoS10 Europe PMC9 |
| 2020 |
Kidsley, A. K., O'Dea, M., Ebrahimie, E., Mohammadi Dehcheshmeh, M., Saputra, S., Jordan, D., . . . Trott, D. J. (2020). Genomic analysis of fluoroquinolone-susceptible phylogenetic group B2 extraintestinal pathogenic Escherichia coli causing infections in cats. Veterinary Microbiology, 245(-), 108685-1-108685-7.
DOI Scopus14 WoS15 Europe PMC14 |
| 2020 |
Len, J., Beehan, D., Eilts, B., Ebrahimie, E., & Lyle, S. (2020). Stallion Sperm Integrity After Centrifugation to Reduce Seminal Plasma Concentration and Cool Storage for 4 days. Journal of Equine Veterinary Science, 85, 3 pages.
DOI Scopus6 WoS6 Europe PMC2 |
| 2020 |
Shiri, Y., Solouki, M., Ebrahimie, E., Emamjomeh, A., & Zahiri, J. (2020). Gibberellin causes wide transcriptional modifications in the early stage of grape cluster development. Genomics, 112(1), 820-830.
DOI Scopus19 WoS19 Europe PMC9 |
| 2020 |
Tilley, W., Hickey, T., Selth, L., Chia, K. M., Milioli, H., Laven-Law, G., . . . Carroll, J. (2020). The Androgen Receptor is a Tumour Suppressor in Estrogen Receptor Positive Breast Cancer.
DOI |
| 2019 |
Sharifi, S., Pakdel, A., Ebrahimie, E., Aryan, Y., Ghaderi Zefrehee, M., & Reecy, J. M. (2019). Prediction of key regulators and downstream targets of E. coli induced mastitis. Journal of Applied Genetics, 60(3-4), 367-373.
DOI Scopus20 WoS14 Europe PMC12 |
| 2019 |
Ansari, E., Karami, A., & Ebrahimie, E. (2019). Isolation of 2-phenylethanol biosynthesis related gene and developmental patterns of emission of scent compounds in Persian musk rose (Rosa moschata Herrm.). Biocatalysis and Agricultural Biotechnology, 19, 6 pages.
DOI Scopus4 WoS4 |
| 2019 |
Kharrati Koopaee, H., Ebrahimie, E., Dadpasand, M., Niazi, A., & Esmailizadeh, A. (2019). Genomic analysis reveals variant association with high altitude adaptation in native chickens. Scientific reports, 9(1), 1-22.
DOI Scopus14 WoS11 Europe PMC12 |
| 2019 |
Ebrahimi, M., Mohammadi-Dehcheshmeh, M., Ebrahimie, E., & Petrovski, K. R. (2019). Comprehensive analysis of machine learning models for prediction of sub-clinical mastitis: Deep Learning and Gradient-Boosted Trees outperform other models. Computers in Biology and Medicine, 114, 1-9.
DOI Scopus130 WoS102 Europe PMC57 |
| 2019 |
Farhadian, M., Rafat, S. A., Hasanpur, K., Ebrahimi, M., & Ebrahimie, E. (2019). Corrigendum: Cross-Species Meta-Analysis of Transcriptomic Data in Combination With Supervised Machine Learning Models Identifies the Common Gene Signature of Lactation Process.. Front Genet, 10, 1034.
DOI Scopus1 WoS1 Europe PMC1 |
| 2019 |
Moore, N. L., Hanson, A. R., Ebrahimie, E., Hickey, T. E., & Tilley, W. D. (2019). ANTI-proliferative transcriptional effects of medroxyprogesterone acetate in Estrogen receptor positive breast cancer cells are predominantly mediated by ThE progesterone receptor.. Journal of Steroid Biochemistry and Molecular Biology, 199, 105548.
DOI Scopus16 WoS13 Europe PMC10 |
| 2019 |
Alanazi, I. O., Al Shehri, Z. S., Ebrahimie, E., Giahi, H., & Mohammadi-Dehcheshmeh, M. (2019). Non-coding and coding genomic variants distinguish prostate cancer, castration-resistant prostate cancer, familial prostate cancer, and metastatic castration-resistant prostate cancer from each other. Molecular Carcinogenesis, 58(6), 13 pages.
DOI Scopus11 WoS11 Europe PMC8 |
| 2019 |
Kargarfard, F., Sami, A., Hemmatzadeh, F., & Ebrahimie, E. (2019). Identifying mutation positions in all segments of influenza genome enables better differentiation between pandemic and seasonal strains. Gene, 697, 78-85.
DOI Scopus9 WoS9 Europe PMC9 |
| 2019 |
Tahmasebi, A., Ashrafi-Dehkordi, E., Shahriari, A. G., Mazloomi, S. M., & Ebrahimie, E. (2019). Integrative meta-analysis of transcriptomic responses to abiotic stress in cotton. Progress in Biophysics and Molecular Biology, 146, 112-122.
DOI Scopus73 WoS67 Europe PMC56 |
| 2019 |
Tahmasebi, A., Ebrahimie, E., Pakniyat, H., Ebrahimi, M., & Mohammadi-Dehcheshmeh, M. (2019). Insights from the Echinacea purpurea (L.) Moench transcriptome: Global reprogramming of gene expression patterns towards activation of secondary metabolism pathways. Industrial Crops and Products, 132, 365-376.
DOI Scopus12 WoS13 Europe PMC2 |
| 2019 |
Speight, K. N., Houston-Francis, M., Mohammadi Dehcheshmeh, M., Ebrahimie, E., Saputra, S., & Trott, D. J. (2019). Oxalate-degrading bacteria, including Oxalobacter formigenes, colonise the gastrointestinal tract of healthy koalas (Phascolarctos cinereus) and those with oxalate nephrosis. Australian Veterinary Journal, 97(5), 166-170.
DOI Scopus5 WoS5 Europe PMC2 |
| 2019 |
Rahmatizadeh, F., Aziz, S. G. G., Khodadadi, K., Ataei, M. L., Ebrahimie, E., Rad, J. S., & Pashaiasl, M. (2019). Bidirectional and opposite effects of naïve mesenchymal stem cells on tumor growth and progression. Advanced Pharmaceutical Bulletin, 9(4), 539-558.
DOI Scopus17 WoS17 Europe PMC15 |
| 2019 |
Tahmasebi, A., Ebrahimie, E., Pakniyat, H., Ebrahimi, M., & Mohammadi Dehcheshmeh, M. (2019). Tissue-specific transcriptional biomarkers in medicinal plants: Application of large-scale meta-analysis and computational systems biology. Gene, 691, 114-124.
DOI Scopus15 WoS13 Europe PMC11 |
| 2019 |
Godini, R., Fallahi, H., & Ebrahimie, E. (2019). A comparative system-level analysis of the neurodegenerative diseases. Journal of Cellular Physiology, 234(4), 5215-5229.
DOI Scopus8 WoS6 Europe PMC8 |
| 2018 |
Mohammadi Dehcheshmeh, M., Niazi, A., Ebrahimi, M., Tahsili, M., Nurollah, Z., Ebrahimi Khaksefidi, R., . . . Ebrahimie, E. (2018). Unified Transcriptomic Signature of Arbuscular Mycorrhiza Colonization in Roots of Medicago truncatula by Integration of Machine Learning, Promoter Analysis, and Direct Merging Meta-Analysis. Frontiers in Plant Science, 9(1550), 1-24.
DOI Scopus25 WoS22 Europe PMC17 |
| 2018 |
Pashaei-Asl, F., Pashaei-Asl, R., Khodadadi, K., Akbarzadeh, A., Ebrahimie, E., & Pashaiasl, M. (2018). Enhancement of anticancer activity by silibinin and paclitaxel combination on the ovarian cancer. Artificial Cells, Nanomedicine and Biotechnology, 46(7), 1483-1487.
DOI Scopus56 WoS49 Europe PMC38 |
| 2018 |
Alanazi, I., AlYahya, S., Ebrahimie, E., & Mohammadi-Dehcheshmeh, M. (2018). Computational systems biology analysis of biomarkers in lung cancer; unravelling genomic regions which frequently encode biomarkers, enriched pathways, and new candidates. Gene, 659, 29-36.
DOI Scopus14 WoS10 Europe PMC10 |
| 2018 |
Baharlou Houreh, M., Ghorbani Kalkhajeh, P., Niazi, A., Ebrahimi, F., & Ebrahimie, E. (2018). SpliceDetector: A software for detection of alternative splicing events in human and model organisms directly from transcript IDs. Scientific Reports, 8(1), 11 pages.
DOI Scopus9 WoS8 Europe PMC8 |
| 2018 |
Rahimi, T., Niazi, A., Deihimi, T., Taghavi, S., Ayatollahi, S., & Ebrahimie, E. (2018). Genome annotation and comparative genomic analysis of Bacillus subtilis MJ01, a new bio-degradation strain isolated from oil-contaminated soil. Functional and Integrative Genomics, 18(5), 533-543.
DOI Scopus19 WoS15 Europe PMC7 |
| 2018 |
Azizi, F., Jalil, H., Nasiri, Z., Moshtaghian, J., Esmaeili, F., Doostmohammadi, A., . . . Ebrahimie, E. (2018). The combined effects of three dimensional cell culture and natural tissue extract on neural differentiation of P19 embryonal carcinoma stem cells. Journal of tissue engineering and regenerative medicine, 12(9), 1909-1924.
DOI Scopus8 WoS8 Europe PMC6 |
| 2018 |
Farhadian, M., Rafat, S., Hasanpur, K., & Ebrahimie, E. (2018). Transcriptome signature of the lactation process, identified by meta-analysis of microarray and RNA-Seq data. Biotechnologia, 99(2), 153-163.
DOI Scopus10 |
| 2018 |
Farhadian, M., Rafat, S., Hasanpur, K., Ebrahimi, M., & Ebrahimie, E. (2018). Cross-species meta-analysis of transcriptomic data in combination with supervised machine learning models identifies the common gene signature of lactation process. Frontiers in Genetics, 9(article no. 235), 1-17.
DOI Scopus30 WoS27 Europe PMC20 |
| 2018 |
Shamloo-Dashtpagerdi, R., Razi, H., Ebrahimie, E., & Niazi, A. (2018). Molecular characterization of Brassica napus stress related transcription factors, BnMYB44 and BnVIP1, selected based on comparative analysis of Arabidopsis thaliana and Eutrema salsugineum transcriptomes. Molecular Biology Reports, 45(5), 1111-1124.
DOI Scopus23 WoS20 Europe PMC12 |
| 2018 |
Godini, R., Fallahi, H., & Ebrahimie, E. (2018). Network analysis of inflammatory responses to sepsis by neutrophils and peripheral blood mononuclear cells. PLoS ONE, 13(8), e0201674.
DOI Scopus23 WoS20 Europe PMC23 |
| 2018 |
Helal, S., Li, J., Liu, L., Ebrahimie, E., Dawson, S., Murray, D., & Long, Q. (2018). Predicting academic performance by considering student heterogeneity. Knowledge-Based Systems, 161, 134-146.
DOI Scopus164 WoS111 |
| 2018 |
Helal, S., Li, J., Liu, L., Ebrahimie, E., Dawson, S., & Murray, D. J. (2018). Identifying key factors of student academic performance by subgroup discovery. International Journal of Data Science and Analytics, 7(3), 227-245.
DOI Scopus39 WoS29 |
| 2018 |
Ebrahimie, E., Ebrahimi, F., Ebrahimi, M., Tomlinson, S., & Petrovski, K. R. (2018). A large-scale study of indicators of sub-clinical mastitis in dairy cattle by attribute weighting analysis of milk composition features: highlighting the predictive power of lactose and electrical conductivity. Journal of Dairy Research, 85(2), 193-200.
DOI Scopus67 WoS60 Europe PMC41 |
| 2018 |
Alanazi, I., Ebrahimie, E., Hoffmann, P., & Adelson, D. (2018). Correction to: Combined gene expression and proteomic analysis of EGF induced apoptosis in A431 cells suggests multiple pathways trigger apoptosis (Apoptosis, (2013), 18, 11, (1291-1305), 10.1007/s10495-013-0887-6). Apoptosis, 23(1), 92.
DOI Scopus1 WoS1 Europe PMC1 |
| 2018 |
Tarigan, S., Wibowo, M., Indriani, R., Sumarningsih, S., Artanto, S., Idris, S., . . . Ignjatovic, J. (2018). Field effectiveness of highly pathogenic avian influenza H5N1 vaccination in commercial layers in Indonesia. PLoS ONE, 13(1), e0190947-1-e0190947-15.
DOI Scopus23 WoS18 Europe PMC14 |
| 2018 |
Alisoltani, A., Shiran, B., Sarvestani, N., Fallahi, H., Feto, N., & Ebrahimie, E. (2018). Changes in microsatellite motifs in response to abiotic stresses: a case study using wheat and rice RNA-sequencing data. Asian Journal of Scientific Research, 11(1), 12-21.
DOI Scopus1 |
| 2018 |
Sharifi, S., Pakdel, A., Ebrahimi, M., Reecy, J., Farsani, S., & Ebrahimie, E. (2018). Integration of machine learning and metaanalysis identifies the transcriptomic bio-signature of mastitis disease in cattle. PLoS ONE, 13(2), 18 pages.
DOI Scopus98 WoS89 Europe PMC63 |
| 2018 |
Ebrahimie, E., Ebrahimi, F., Ebrahimi, M., Tomlinson, S., & Petrovski, K. (2018). Hierarchical pattern recognition in milking parameters predicts mastitis prevalence. Computers and Electronics in Agriculture, 147, 6-11.
DOI Scopus58 WoS50 Europe PMC9 |
| 2018 |
Ricciardelli, C., Bianco-Miotto, T., Jindal, S., Butler, L., Leung, S., McNeil, C., . . . Tilley, W. (2018). The magnitude of androgen receptor positivity in breast cancer is critical for reliable prediction of disease outcome. Clinical Cancer Research, 24(10), 2328-2341.
DOI Scopus76 WoS71 Europe PMC69 |
| 2018 |
Centenera, M., Selth, L., Ebrahimie, E., Butler, L., & Tilley, W. (2018). New opportunities for targeting the androgen receptor in prostate cancer. Cold Spring Harbor Perspectives in Medicine, 10(12), 1-19.
DOI Scopus24 WoS21 Europe PMC21 |
| 2018 |
Shiri, Y., Solouki, M., Ebrahimie, E., Emamjomeh, A., & Zahiri, J. (2018). Unraveling the transcriptional complexity of compactness in sistan grape cluster. Plant Science, 270, 198-208.
DOI Scopus15 WoS13 Europe PMC10 |
| 2017 |
Fruzangohar, M., Ebrahimie, E., & Adelson, D. (2017). A novel hypothesis-unbiased method for gene ontology enrichment based on transcriptome data. PLoS ONE, 12(2), e0170486-1-e0170486-14.
DOI Scopus19 WoS15 Europe PMC14 |
| 2017 |
Knight, E., Trott, D., Page, S., Garg, S., Zhang, Q., Song, Y., . . . Shipstone, M. (2017). In vitro comparison of the dermal penetration of three different topical formulations containing lasalocid. Veterinary Dermatology, 28(4), 342-347.
DOI Scopus2 WoS2 |
| 2017 |
Kakeshpour, T., Monfared, S., Ebrahimi, A., Beyraghdar Kashkooli, A., & Ebrahimie, E. (2017). Expression analyses of salinity stress- associated ESTs in Aeluropus littoralis. Gene Expression Patterns, 25-26, 76-84.
DOI Scopus3 WoS3 Europe PMC4 |
| 2017 |
Pashaei-Asl, R., Pashaei-Asl, F., Gharabaghi, P., Khodadadi, K., Ebrahimi, M., Ebrahimie, E., & Pashaiasl, M. (2017). The inhibitory effect of ginger extract on Ovarian cancer cell line; Application of systems biology. Advanced Pharmaceutical Bulletin, 7(2), 241-249.
DOI Scopus53 WoS46 Europe PMC31 |
| 2017 |
Moazzzam Jazi, M., Seyedi, S., Ebrahimie, E., Ebrahimi, M., De Moro, G., & Botanga, C. (2017). A genome-wide transcriptome map of pistachio (Pistacia vera L.) provides novel insights into salinity-related genes and marker discovery. BMC Genomics, 18(1), 1-21.
DOI Scopus41 WoS38 Europe PMC17 |
| 2017 |
Ebrahimie, E., Fruzangohar, M., Moussavi Nik, S. H., & Newman, M. (2017). Gene Ontology-based analysis of zebrafish’ omics data using the web tool Comparative Gene Ontology. Zebrafish, 14(5), 492-494.
DOI Scopus15 WoS14 Europe PMC13 |
| 2017 |
Rahbar, S., Novin, M., Alizadeh, E., Shahnazi, V., Pashaei-Asl, F., AsrBadr, Y., . . . Pashaiasl, M. (2017). New insights into the expression profile of MicroRNA-34c and P53 in infertile men spermatozoa and testicular tissue. Cellular and Molecular Biology, 63(8), 77-83.
DOI Scopus28 WoS26 Europe PMC20 |
| 2017 |
Das, R., Gregory, P. A., Fernandes, R. C., Denis, I., Wang, Q., Townley, S. L., . . . Selth, L. A. (2017). MicroRNA-194 promotes prostate cancer metastasis by inhibiting SOCS2. Cancer Research, 77(4), 1021-1034.
DOI Scopus103 WoS103 Europe PMC91 |
| 2017 |
Shirzad, H., Esmaeili, F., Bakhshalizadeh, S., Ebrahimie, M., & Ebrahimie, E. (2017). Production of stable GFP-expressing neural cells from P19 embryonal carcinoma stem cells. Molecular and Cellular Probes, 32, 46-54.
DOI Scopus1 WoS1 Europe PMC1 |
| 2016 |
Mansouri, A., Esmaeili, F., Nejatpour, A., Houshmand, F., Shabani, L., & Ebrahimie, E. (2016). Differentiation of P19 embryonal carcinoma stem cells into insulin-producing cells promoted by pancreas-conditioned medium. Journal of Tissue Engineering and Regenerative Medicine, 10(7), 600-612.
DOI Scopus8 WoS8 Europe PMC8 |
| 2016 |
Mehrfarjam, Z., Esmaeili, F., Shabani, L., & Ebrahimie, E. (2016). Induction of pancreatic β cell gene expression in mesenchymal stem cells. Cell Biology International, 40(5), 486-500.
DOI Scopus13 WoS13 Europe PMC12 |
| 2016 |
Pashaiasl, M., Khodadadi, K., Kayvanjoo, A., Pashaei-asl, R., Ebrahimie, E., & Ebrahimi, M. (2016). Unravelling evolution of Nanog, the key transcription factor involved in self-renewal of undifferentiated embryonic stem cells, by pattern recognition in nucleotide and tandem repeats characteristics. Gene, 578(2), 194-204.
DOI Scopus18 WoS18 Europe PMC13 |
| 2016 |
Hasan, N., Ebrahimie, E., Ignjatovic, J., Tarigan, S., Peaston, A., & Hemmatzadeh, F. (2016). Antigenic mapping for determining the immunoreactivity of different regions of M2e protein of H5N1 influenza using overlapping peptides-based ELISA. PLoS One. |
| 2016 |
Jamali, A., Ferdousi, R., Razzaghi, S., Li, J., Safdari, R., & Ebrahimie, E. (2016). DrugMiner: comparative analysis of machine learning algorithms for prediction of potential druggable proteins. Drug Discovery Today, 21(5), 718-724.
DOI Scopus85 WoS77 Europe PMC60 |
| 2016 |
Ebrahimie, E., Moussavi Nik, S., Newman, M., Van Der Hoek, M., & Lardelli, M. (2016). The Zebrafish equivalent of Alzheimer's disease-associated PRESENILIN Isoform PS2V regulates inflammatory and other responses to hypoxic stress. Journal of Alzheimer's Disease, 52(2), 581-608.
DOI Scopus16 WoS13 Europe PMC14 |
| 2016 |
Alanazi, I., & Ebrahimie, E. (2016). Computational systems biology approach predicts regulators and targets of microRNAs and their genomic hotspots in apoptosis process. Molecular Biotechnology, 58(7), 460-479.
DOI Scopus14 WoS12 Europe PMC12 |
| 2016 |
Hasan, N., Ebrahimie, E., Ignjatovic, J., Tarigan, S., Peaston, A., & Hemmatzadeh, F. (2016). Epitope mapping of avian influenza m2e protein: different species recognise various epitopes. PLoS One, 11(6), e0156418-1-e0156418-15.
DOI Scopus9 WoS8 Europe PMC8 |
| 2016 |
Pashaiasl, M., Ebrahimi, M., & Ebrahimie, E. (2016). Identification of the key regulating genes of diminished ovarian reserve (DOR) by network and gene ontology analysis. Molecular Biology Reports, 43(9), 923-937.
DOI Scopus29 WoS26 Europe PMC20 |
| 2016 |
Kargarfard, F., Sami, A., Mohammadi-Dehcheshmeh, M., & Ebrahimie, E. (2016). Novel approach for identification of influenza virus host range and zoonotic transmissible sequences by determination of host-related associative positions in viral genome segments. BMC Genomics, 17(1), 925-1-925-10.
DOI Scopus22 WoS20 Europe PMC20 |
| 2015 |
Ebrahimi, M., Ebrahimie, E., & Bull, C. (2015). Minimizing the cost of translocation failure with decision-tree models that predict species' behavioral response in translocation sites. Conservation Biology, 29(4), 1208-1216.
DOI Scopus18 WoS17 Europe PMC7 |
| 2015 |
Rafiei, F., Torabi, Z., & Ebrahimie, E. (2015). "Type A" response regulators are involved in the plant-microbe interaction. Plant Omics Journal, 8(2), 178-182.
Scopus2 |
| 2015 |
Moussavi Nik, S., Newman, M., Wilson, L., Ebrahimie, E., Wells, S., Musgrave, I., . . . Lardelli, M. (2015). Alzheimer's disease-related peptide PS2V plays ancient, conserved roles in suppression of the unfolded protein response under hypoxia and stimulation of γ-secretase activity. Human Molecular Genetics, 24(13), 3662-3678.
DOI Scopus28 WoS25 Europe PMC27 |
| 2015 |
Fruzangohar, M., Ebrahimie, E., Ogunniyi, A. D., Mahdi, L. K., Paton, J. C., & Adelson, D. L. (2015). Correction: Comparative GO: A web application for comparative gene ontology and gene ontology-based gene selection in bacteria. Plos One, 10(4), 1 page.
DOI Scopus6 WoS4 Europe PMC3 |
| 2015 |
Lim, A., Moussavi Nik, S., Ebrahimie, E., & Lardelli, M. (2015). Analysis of nicastrin gene phylogeny and expression in zebrafish. Development Genes and Evolution, 225(3), 171-178.
DOI Scopus7 WoS7 Europe PMC5 |
| 2015 |
Bidabadi, M., Shiran, B., Fallahi, H., Rafiei, F., Esmaeili, F., & Ebrahimie, E. (2015). Identification of differential expressed transcripts of almond (Prunus dulcis ‘Sefied’) in response to water-deficit stress by cDNA-AFLP. Journal of Forest Research, 20(4), 403-410.
DOI Scopus3 WoS1 |
| 2015 |
Shamloo-Dashtpagerdi, R., Razi, H., & Ebrahimie, E. (2015). Mining expressed sequence tags of rapeseed (Brassica napus L.) to predict the drought responsive regulatory network. Physiology and Molecular Biology of Plants, 21(3), 329-340.
DOI Scopus19 WoS13 Europe PMC8 |
| 2015 |
Khazandi, M., Eats, P., Trott, D., Ebrahimie, E., Perry, J., Hickey, E., . . . Petrovski, K. (2015). Development of an improved Streptococcus uberis experimental mastitis challenge model using different doses and strains in lactating dairy cows. Journal of Dairy Research, 82(4), 470-477.
DOI Scopus8 WoS8 Europe PMC7 |
| 2015 |
Ebrahimie, E., Nurollah, Z., Ebrahimi, M., Hemmatzadeh, F., & Ignjatovic, J. (2015). Unique ability of pandemic influenza to downregulate the genes involved in neuronal disorders. Molecular Biology Reports, 42(9), 1377-1390.
DOI Scopus15 WoS13 Europe PMC13 |
| 2015 |
Kargarfard, F., Sami, A., & Ebrahimie, E. (2015). Knowledge discovery and sequence-based prediction of pandemic influenza using an integrated classification and association rule mining (CBA) algorithm. Journal of Biomedical Informatics, 57, 181-188.
DOI Scopus36 WoS26 Europe PMC15 |
| 2015 |
Gharaghani, F., Rafiei, F., Mirakhorli, N., & Ebrahimie, E. (2015). Differential expression of TLP, ERF1, and R2R3MYB in annual Medicago species under salinity conditions. Genetics and Molecular Research, 14(3), 10152-10164.
DOI Scopus6 WoS6 Europe PMC5 |
| 2015 |
Tavizi, A., Javaran, M., Moieni, A., Mohammadi-Dehcheshmeh, M., Mohebodini, M., & Ebrahimie, E. (2015). Root and shoot parts of strawberry: factories for production of functional human pro-insulin. Molecular Biology Reports, 42(5), 1013-1023.
DOI Scopus8 WoS9 Europe PMC3 |
| 2015 |
Parvini, F., Zeinanloo, A. A., Ebrahimie, E., Tahmasebi-Enferadi, S., & Hosseini-Mazinani, M. (2015). Differential expression of fatty acid desaturases in Mari and Shengeh olive cultivars during fruit development and ripening. European Journal of Lipid Science and Technology, 117(4), 523-531.
DOI Scopus25 WoS23 |
| 2015 |
Alisoltani, A., Fallahi, H., Shiran, B., Alisoltani, A., & Ebrahimie, E. (2015). RNA-Seq SSRs and small RNA-Seq SSRs: new approaches in cancer biomarker discovery. Gene, 560(1), 34-43.
DOI Scopus10 WoS8 Europe PMC8 |
| 2015 |
Shamloo-Dashtpagerdi, R., Razi, H., Aliakbari, M., Lindlöf, A., Ebrahimi, M., & Ebrahimie, E. (2015). A novel pairwise comparison method for in silico discovery of statistically significant cis-regulatory elements in eukaryotic promoter regions: application to Arabidopsis. Journal of Theoretical Biology, 364, 364-376.
DOI Scopus12 WoS8 Europe PMC7 |
| 2015 |
Hemmatzadeh, F., Keyvanfar, H., Hasan, N., Niap, F., Bani Hassan, E., Hematzade, A., . . . Ignjatovic, J. (2015). Interaction between Bovine leukemia virus (BLV) infection and age on telomerase misregulation. Veterinary Research Communications, 39(2), 97-103.
DOI Scopus9 WoS7 Europe PMC5 |
| 2015 |
Panahi, B., Mohammadi, S., Khaksefidi, R., Fallah Mehrabadi, J., & Ebrahimie, E. (2015). Genome-wide analysis of alternative splicing events in Hordeum vulgare: highlighting retention of intron-based splicing and its possible function through network analysis. FEBS Letters, 589(23), 3564-3575.
DOI Scopus35 WoS34 Europe PMC28 |
| 2015 |
Khaksefidi, R., Mirlohi, S., Khalaji, F., Fakhari, Z., Shiran, B., Fallahi, H., . . . Ebrahimie, E. (2015). Differential expression of seven conserved microRNAs in response to abiotic stress and their regulatory network in Helianthus annuus. Frontiers in Plant Science, 6(Sep), 741-1-741-14.
DOI Scopus72 WoS56 Europe PMC31 |
| 2015 |
Khaksar, G., Tabatabaei, B., Arzani, A., Ghobadi, C., & Ebrahimie, E. (2015). Functional analysis of a pomegranate (Punica granatum L.) MYB transcription factor involved in the regulation of anthocyanin biosynthesis. Iranian Journal of Biotechnology, 13(1), 104517-104525.
DOI Scopus14 WoS11 Europe PMC8 |
| 2015 |
Alisoltani, A., Shiran, B., Fallahi, H., & Ebrahimie, E. (2015). Gene regulatory network in almond (Prunus dulcis Mill.) in response to frost stress. Tree Genetics and Genomes, 11(5), 100-1-100-15.
DOI Scopus22 WoS18 |
| 2015 |
Mahdi, L., Van der Hoek, M., Ebrahimie, E., Paton, J., & Ogunniyi, A. (2015). Characterization of pneumococcal genes involved in bloodstream invasion in a mouse model. PLoS One, 10(11), e0141816-1-e0141816-15.
DOI Scopus19 WoS19 Europe PMC18 |
| 2015 |
Torkzaban, B., Kayvanjoo, A., Ardalan, A., Mousavi, S., Mariotti, R., Baldoni, L., . . . Hosseini-Mazinani, M. (2015). Machine learning based classification of microsatellite variation: an effective approach for phylogeographic characterization of olive populations. PLoS One, 10(11), e0143465-1-e0143465-17.
DOI Scopus23 WoS18 Europe PMC10 |
| 2014 |
Delavari, A., Zare, S., Ghaemi, M., Kashfi, R., Ebrahimi, M., Tahmasebi, A., . . . Ebrahimie, E. (2014). Determining the structural amino acid attributes which are important in both protein thermostability and alkalophilicity: a case study on xylanase. Biotechnologia, 95(2), 161-173.
DOI Scopus2 |
| 2014 |
Hadifar, F., Ignjatovic, J., Tarigan, S., Indriani, R., Ebrahimie, E., Haliza Hasan, N., . . . Hemmatzadeh, F. (2014). Multimeric recombinant M2e protein-based ELISA: A significant improvement in differentiating avian influenza infected chickens from vaccinated ones. PLoS One, 9(10), e108420-1-e108420-8.
DOI Scopus13 WoS18 Europe PMC11 |
| 2014 |
Pourkhorshid, Z., Dadkhodaie, A., Niazi, A., Heidari, B., & Ebrahimi, E. (2014). Identification of wheat stripe rust resistance genes in Iranian wheat cultivars using molecular markers. Annual Research & Review in Biology, 4(17), 2766-2778.
DOI |
| 2014 |
Mahdi, L., Deihimi, T., Zamansani, F., Fruzangohar, M., Adelson, D., Paton, J., . . . Ebrahimie, E. (2014). A functional genomics catalogue of activated transcription factors during pathogenesis of pneumococcal disease. BMC Genomics, 15(1), 769-1-769-15.
DOI Scopus17 WoS15 Europe PMC16 |
| 2014 |
Zinati, Z., Zamansani, F., Hossein KayvanJoo, A., Ebrahimi, M., Ebrahimi, M., Ebrahimie, E., & Mohammadi Dehcheshmeh, M. (2014). New layers in understanding and predicting α-linolenic acid content in plants using amino acid characteristics of omega-3 fatty acid desaturase. Computers in Biology and Medicine, 54, 14-23.
DOI Scopus18 WoS16 Europe PMC8 |
| 2014 |
Zamani Babgohari, M., Ebrahimie, E., & Niazi, A. (2014). In silico analysis of high affinity potassium transporter (HKT) isoforms in different plants. Aquatic Biosystems, 10(1), 9-1-9-14.
DOI Europe PMC13 |
| 2014 |
Ebrahimie, M., Esmaeili, F., Cheraghi, S., Houshmand, F., Shabani, L., & Ebrahimie, E. (2014). Efficient and simple production of insulin-producing cells from embryonal carcinoma stem cells using mouse neonate pancreas extract, as a natural inducer. PLOS One, 9(3), 1-12.
DOI Scopus35 WoS33 Europe PMC26 |
| 2014 |
Ebrahimi, M., Aghagolzadeh, P., Shamabadi, N., Tahmasebi, A., Alsharifi, M., Adelson, D., . . . Ebrahimie, E. (2014). Understanding the undelaying mechanism of HASubtyping in the level of physic-chemal characteristics of protein. PLoS One, 9(5), e96984-1-e96984-14.
DOI Scopus27 WoS22 Europe PMC20 |
| 2014 |
Mousavi, S., Alisoltani, A., Shiran, B., Fallahi, H., Ebrahimie, E., Imani, A., & Houshmand, S. (2014). De novo transcriptome assembly and comparative analysis of differentially expressed genes in Prunus dulcis Mill. in response to freezing stress. PLoS One, 9(8), e104541-1-e104541-13.
DOI Scopus58 WoS47 Europe PMC33 |
| 2014 |
Hosseinpour, B., Bakhtiarizadeh, M., Mirabbassi, S., & Ebrahimie, E. (2014). Comparison of hematopoietic cancer stem cells with normal stem cells leads to discovery of novel differentially expressed SSRs. Gene, 550(1), 10-17.
DOI Scopus2 WoS2 Europe PMC2 |
| 2014 |
Newman, M., Ebrahimie, E., & Lardelli, M. (2014). Using the zebrafish model for Alzheimer's disease research. Frontiers in Genetics, 5(JUN), 189-1-189-10.
DOI Scopus135 WoS118 Europe PMC87 |
| 2014 |
Panahi, B., Abbaszadeh, B., Taghizadeghan, M., & Ebrahimie, E. (2014). Genome-wide survey of alternative splicing in sorghum bicolor. Physiology and Molecular Biology of Plants, 20(3), 323-329.
DOI Scopus30 WoS26 Europe PMC21 |
| 2014 |
Shekoofa, A., Emam, Y., Shekoufa, N., Ebrahimi, M., & Ebrahimie, E. (2014). Determining the most important physiological and agronomic traits contributing to maize grain yield through machine learning algorithms: a new avenue in intelligent agriculture. PLoS One, 9(5), e97288-1-e97288-9.
DOI Scopus76 WoS65 Europe PMC23 |
| 2014 |
Bakhtiarizadeh, M., Moradi-Shahrbabak, M., Ebrahimi, M., & Ebrahimie, E. (2014). Neural network and SVM classifiers accurately predict lipid binding proteins, irrespective of sequence homology. Journal of Theoretical Biology, 356, 213-222.
DOI Scopus54 WoS45 Europe PMC31 |
| 2014 |
Alisoltani, A., Fallahi, H., Ebrahimi, M., Ebrahimi, M., & Ebrahimie, E. (2014). Prediction of potential cancer-risk regions based on transcriptome data: towards a comprehensive view. PLoS One, 9(5), e96320-1-e96320-13.
DOI Scopus22 WoS19 Europe PMC17 |
| 2014 |
Bakhtiarizadeh, M., Moradi-Shahrbabak, M., & Ebrahimie, E. (2014). Transcriptional regulatory network analysis of the over-expressed genes in adipose tissue. Genes and Genomics, 36(1), 105-117.
DOI Scopus15 WoS15 |
| 2014 |
Mohammadi Dehcheshmeh, M., Ebrahimie, E., Tyerman, S., & Kaiser, B. (2014). A novel method based on combination of semi-in vitro and in vivo conditions in Agrobacterium rhizogenes-mediated hairy root transformation of Glycine species. In Vitro Cellular & Developmental Biology-plant, 50(2), 282-291.
DOI Scopus12 WoS13 |
| 2013 |
Alanazi, I., Ebrahimie, E., Hoffmann, P., & Adelson, D. (2013). Combined gene expression and proteomic analysis of EGF induced apoptosis in A431 cells suggests multiple pathways trigger apoptosis. Apoptosis, 18(11), 1291-1305.
DOI Scopus23 WoS19 Europe PMC20 |
| 2013 |
Hosseinpour, B., Bakhtiarizadeh, M., Khosravi, P., & Ebrahimie, E. (2013). Predicting distinct organization of transcription factor binding sites on the promoter regions: a new genome-based approach to expand human embryonic stem cell regulatory network. Gene, 531(2), 212-219.
DOI Scopus25 WoS25 Europe PMC28 |
| 2013 |
Panahi, B., Mohammadi, S., & Ebrahimie, E. (2013). Identification of miRNAs and their potential targets in halophyte plant Thellungiella halophila. Biotechnologia: przeglad informacyjny, 94(3), 285-290.
DOI Scopus14 |
| 2013 |
Mahdi, L., Ebrahimie, E., Adelson, D., Paton, J., & Ogunniyi, A. (2013). A transcription factor contributes to pathogenesis and virulence in streptococcus pneumoniae. PLoS One, 8(8), 1-9.
DOI Scopus14 WoS13 Europe PMC13 |
| 2013 |
Alimohammadi, M., Shiran, B., Martinez-Gomez, P., & Ebrahimie, E. (2013). Identification of water-deficit resistance genes in wild almond Prunus scoparia using cDNA-AFLP. Scientia Horticulturae, 159, 19-28.
DOI Scopus20 WoS21 |
| 2013 |
Deihimi, T., Niazi, A., & Ebrahimie, E. (2013). Identification and expression analysis of TLPs as candidate genes promoting the responses to both biotic and abiotic stresses in wheat. Plant Omics, 6(2), 107-115.
Scopus5 WoS2 |
| 2013 |
Moghadam, A., Ebrahimie, E., Taghavi, S., Niazi, A., Babgohari, M., Deihimi, T., . . . Ramezani, A. (2013). How the nucleus and mitochondria communicate in energy production during stress: nuclear MtATP6, an early-stress responsive gene, regulates the mitochondrial F1F0-ATP synthase complex. Molecular Biotechnology, 54(3), 756-769.
DOI Scopus30 WoS29 Europe PMC18 |
| 2013 |
Bakhtiarizadeh, M., Moradi-Shahrbabak, M., & Ebrahimie, E. (2013). Underlying functional genomics of fat deposition in adipose tissue. Gene, 521(1), 122-128.
DOI Scopus61 WoS61 Europe PMC48 |
| 2013 |
Fruzangohar, M., Ebrahimie, E., Ogunniyi, A., Mahdi, L., Paton, J., & Adelson, D. (2013). Comparative GO: a web application for comparative Gene Ontology and Gene Ontology-based gene selection in bacteria. PLoS One, 8(3), 1-8.
DOI Scopus59 WoS57 Europe PMC52 |
| 2013 |
Babgohari, M., Niazi, A., Moghadam, A., Deihimi, T., & Ebrahimie, E. (2013). Genome-wide analysis of key salinity-tolerance transporters (HKT1;5) in wheat and wild wheat relatives (A and D genomes). In Vitro Cellular & Developmental Biology-plant, 49(2), 97-106.
DOI Scopus34 WoS31 |
| 2013 |
Hemmatzadeh, F., Sumarningsih, S., Tarigan, S., Indriani, R., Dharmayanti, N., Ebrahimie, E., & Igniatovic, J. (2013). Recombinant M2e protein-based ELISA: A novel and inexpensive approach for differentiating avian influenza infected chickens from vaccinated ones. PLoS One, 8(2), 1-9.
DOI Scopus24 WoS28 Europe PMC19 |
| 2013 |
Shamloo-Dashtpagerdi, R., Razi, H., Lindlof, A., Niazi, A., Dadkhodaie, A., & Ebrahimie, E. (2013). Comparative analysis of expressed sequence tags (ESTs) from Triticum monococcum shoot apical meristem at vegetative and reproductive stages. Genes and Genomics, 35(3), 365-375.
DOI Scopus8 WoS5 |
| 2013 |
Ramezani, A., Niazi, A., Abolimoghadam, A., Babgohari, M., Deihimi, T., Ebrahimi, M., . . . Ebrahimie, E. (2013). Quantitative expression analysis of TaSOS1 and TaSOS4 genes in cultivated and wild wheat plants under salt stress. Molecular Biotechnology, 53(2), 189-197.
DOI Scopus39 WoS33 Europe PMC15 |
| 2012 |
Bakhtiarizadeh, M., Arefnejad, B., Ebrahimie, E., & Ebrahimi, M. (2012). Application of functional genomic information to develop efficient EST-SSRs for the chicken (Gallus gallus). Genetics and Molecular Research, 11(2), 1558-1574.
DOI Scopus15 WoS12 Europe PMC8 |
| 2012 |
Tahmasebi, A., Aram, F., Ebrahimi, M., Mohammadi Dehcheshmeh, M., & Ebrahimie, E. (2012). Genome-wide analysis of cytosolic and chloroplastic isoforms of glutathione reductase in plant cells. Plant Omics, 5(2), 94-102.
Scopus17 WoS15 |
| 2012 |
Hosseinpour, B., HajiHoseini, V., Kashfi, R., Ebrahimie, E., & Hemmatzadeh, F. (2012). Protein interaction network of Arabidopsis thaliana female gametophyte development identifies novel proteins and relations. PLoS One, 7(12), 1-12.
DOI Scopus22 WoS20 Europe PMC15 |
| 2012 |
Abolimoghadam, A., Taghavi, S., Niazi, A., Djavaheri, M., & Ebrahimie, E. (2012). Isolation and in silico functional analysis of MtATP6, a 6-kDa subunit of mitochondrial F₁F₀-ATP synthase, in response to abiotic stress. Genetics and Molecular Research, 11(4), 3547-3567.
DOI Scopus21 WoS18 Europe PMC10 |
| 2012 |
Bijanzadeh, E., Emam, Y., Ebrahimie, E., & Ebrahimi, M. (2012). Application of unsupervised weighting algorithms for identifying important attributes and factors contributing to grain and biological yields of wheat. Crop Breeding Journal, 2(2), 111-117. |
| 2012 |
Deihimi, T., Niazi, A., Ebrahimi, M., Kajbaf, K., Fanaee, S., Bakhtiarizadeh, M., & Ebrahimie, E. (2012). Finding the undiscovered roles of genes: an approach using mutual ranking of coexpressed genes and promoter architecture-case study: dual roles of thaumatin like proteins in biotic and abiotic stresses. SpringerPlus, 1(30), 1-10.
DOI Scopus26 WoS27 Europe PMC21 |
| 2012 |
Borji, H., Azizzadeh, M., Ebrahimi, M., & Asadpour, M. (2012). Study on small ruminant lungworms and associated risk factors in northeastern Iran. ASIAN PACIFIC JOURNAL OF TROPICAL MEDICINE, 5(11), 853-856.
DOI WoS12 Europe PMC10 |
| 2012 |
Hosseinzadeh, F., Ebrahimi, M., Goliaei, B., & Shamabadi, N. (2012). Classification of Lung Cancer Tumors Based on Structural and Physicochemical Properties of Proteins by Bioinformatics Models. PLOS ONE, 7(7), 8 pages.
DOI WoS31 Europe PMC19 |
| 2012 |
Beiki, A. H., Saboor, S., & Ebrahimi, M. (2012). A new avenue for classification and prediction of olive cultivars using supervised and unsupervised algorithms. PLoS ONE, 7(9), e44164-1-e44164-9.
DOI WoS26 Europe PMC20 |
| 2011 |
Ebrahimi, M. (2011). Comparing various attributes of prolactin hormones in different species: application of bioinformatics tools. IRANIAN JOURNAL OF VETERINARY RESEARCH, 12(3), 205-213.
WoS3 |
| 2011 |
Ebrahimi, M., & Taherianfard, M. (2011). Pathological and Hormonal Changes in Freshwater Fishes Due to Exposure to Heavy Metals Pollutants. WATER AIR AND SOIL POLLUTION, 217(1-4), 47-55.
DOI WoS6 |
| 2011 |
Lakizadeh, A., Agha-Golzadeh, P., Ebrahimi, M., Ebrahimie, E., & Ebrahimi, M. (2011). Engineering thermostable enzymes; application of unsupervised clustering algorithms. Advanced Studies in Biology, 3(2), 63-78. |
| 2011 |
Ebrahimie, E., Ebrahimi, M., & Ebrahimi, M. (2011). Amino acid features: a missing compartment of prediction of protein function. Nature Precedings, Online, 1-16.
DOI |
| 2011 |
Ebrahimi, M., Lakizadeh, A., Agha-Golzadeh, P., Ebrahimie, E., & Ebrahimi, M. (2011). Prediction of thermostability from amino acid attributes by combination of clustering with attribute weighting: A new vista in engineering enzymes. PLoS One, 6(8), e23146-1-e23146-11.
DOI Scopus63 WoS50 Europe PMC46 |
| 2011 |
Ashrafi, E., Alemzadeh, A., Ebrahimi, M., Ebrahimie, E., Dadkhodaei, N., & Ebrahimi, M. (2011). Amino acid features of P1B-ATPase heavy metal transporters enabling small numbers of organisms to cope with heavy metal pollution. Bioinformatics and Biology Insights, 5, 59-82.
DOI Scopus28 WoS25 Europe PMC19 |
| 2011 |
Baseri, S., Towhidi, M., & Ebrahimie, E. (2011). A modified efficient empirical Bayes regression model for predicting phenomena with a large number of independent variables and fewer observations; examples of its application in human disease, protein bioinformatics, and microarray gene expression profiling. Advanced Studies in Biology, 3(4), 181-204. |
| 2011 |
Shekoofa, A., Emam, Y., Ebrahimi, M., & Ebrahimie, E. (2011). Application of supervised feature selection methods to define the most important traits affecting maximum kernel water content in maize. Australian Journal of Crop Science, 5(2), 162-168.
Scopus6 WoS4 |
| 2011 |
Ebrahimie, E., Ebrahimi, M., Sarvestani, N., & Ebrahimi, M. (2011). Protein attributes contribute to halo-stability, bioinformatics approach. Aquatic Biosystems, 7(1), 1-14.
DOI Scopus45 Europe PMC36 |
| 2011 |
Tahrokh, E., Ebrahimi, M., Zamansani, F., Ebrahimi, M., Sarvestani, N., Mohammadi Dehcheshmeh, M., . . . Ebrahimie, E. (2011). Comparative study of ammonium transporters in different organisms by study of a large number of structural protein features via data mining algorithms. Genes and Genomics, 33(5), 565-575.
DOI Scopus11 WoS11 |
| 2011 |
Bakhtiarizadeh, M., Ebrahimi, M., & Ebrahimie, E. (2011). Discovery of EST-SSRs in lung cancer: Tagged ESTs with SSRs lead to differential amino acid and protein expression patterns in cancerous tissues. PLoS One, 6(11), 1-11.
DOI Scopus15 WoS13 Europe PMC9 |
| 2010 |
Ebrahimi, M., & Ebrahimie, E. (2010). Sequence-based prediction of enzyme thermostability through bioinformatics algorithms. Current Bioinformatics, 5(3), 195-203.
DOI Scopus26 WoS22 |
| 2010 |
Ebrahimi, M., Ebrahimie, E., Shamabadi, N., & Ebrahimi, M. (2010). Are there any differences between features of proteins expressed in malignant and benign breast cancers?. Journal of Research in Medical Sciences (JRMS), 15(6), 299-309.
Scopus27 WoS24 Europe PMC20 |
| 2010 |
Ebrahimie, E., Ebrahimi, M., & Sarvestani, N. (2010). Investigating protein features contribute to salt stability of halolysin proteins. Journal of Cell and Molecular Research, 2(1), 15-28. |
| 2010 |
Bijanzadeh, E., Emam, Y., & Ebrahimie, E. (2010). Determining the most important features contributing to wheat grain yield using supervised feature selection model. Australian Journal of Crop Science, 4(6), 402-407.
Scopus21 WoS13 |
| 2010 |
Boskabadi, H., Maamouri, G., Ebrahimi, M., Ghayour-Mobarhan, M., Esmaeily, H., Sahebkar, A., & Ferns, G. A. A. (2010). Neonatal hypernatremia and dehydration in infants receiving inadequate breastfeeding. ASIA PACIFIC JOURNAL OF CLINICAL NUTRITION, 19(3), 301-307.
WoS43 Europe PMC30 |
| 2010 |
Ebrahimie, E., Mohammadi-Dehcheshmeh, M., Ebrahimi, M., & Ebrahimi, M. (2010). A study on functional modulations of genome in somatic embryogenesis pathway using EST analysis. NEW BIOTECHNOLOGY, 27, S43.
DOI WoS2 |
| 2009 |
Ebrahimi, M., Ebrahimie, E., & Ebrahimi, M. (2009). Searching for patterns of thermostability in proteins and defining the main features contributing to enzyme thermostability through screening, clustering, and decision tree algorithms. EXCLI Journal, 8, 218-233.
Scopus19 WoS17 |
| 2009 |
Shirazi, M., & Ebrahimie, E. (2009). Evidence that estrogen mediates the positive feedback effect on GnRH. Advances in Environmental Biology, 3(3), 244-248. |
| 2008 |
Mohammadi-Dehcheshmeh, M., Khalighi, A., Naderi, R., Sardari, M., & Ebrahimie, E. (2008). Petal: a reliable explant for direct bulblet regeneration of endangered wild populations of Fritillaria imperialis L.. Acta Physiologiae Plantarum, 30(3), 395-399.
DOI Scopus25 WoS20 |
| 2007 |
Ebrahimie, E., Naghavi, M. R., Hosseinzadeh, A., Behamta, M. R., Mohammadi-Dehcheshmeh, M., Sarrafi, A., & Spangenberg, G. (2007). Induction and comparison of different in vitro morphogenesis pathways using embryo of cumin (Cuminum cyminum L.) as a model material. Plant Cell Tissue and Organ Culture, 90(3), 293-311.
DOI Scopus21 WoS16 |
| 2007 |
Ebrahimie, E., Hosseinzadeh, A., Nagavi, M. R., Ghannadha, M. R., & Mohammadie-Dehcheshmeh, M. (2007). Combined direct regeneration protocols in tissue culture of different cumin genotypes based on pre-existing meristems. Pakistan Journal of Biological Sciences, 10(9), 1360-1370.
DOI Scopus3 |
| 2007 |
Mohammadi-Dehcheshmeh, M., Khalighi, A., Naderi, R., Ebrahimie, E., & Sardari, M. (2007). Indirect somatic embryogenesis from petal explant of endangered wild population of Fritillaria imperialis. Pakistan Journal of Biological Sciences, 10(11), 1875-1879.
DOI Scopus13 |
| 2006 |
Ebrahimie, E., Habashy, A. A., Mohammadie-Dehcheshmeh, M., Ghannadha, M. R., Ghareyazie, B., & Yazdi-Amadi, B. (2006). Direct shoot regeneration from mature embryo as a rapid and genotype-independent pathway in tissue culture of heterogeneous diverse sets of cumin (Cuminum cyminum L.) genotypes. In Vitro Cellular and Developmental Biology Plant, 42(5), 455-460.
DOI Scopus26 WoS24 |
| 2003 |
Ebrahimie, E., Habashi, A. A., Ghareyazie, B., Ghannadha, M., & Mohammadie, M. (2003). A rapid and efficient method for regeneration of plantlets from embryo explants of cumin (Cuminum cyminum). Plant Cell Tissue and Organ Culture, 75(1), 19-25.
DOI Scopus35 WoS23 |
